EnhancerDB
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  3. vista5251[chr1:222828361-222828786]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5251[chr1:222828361-222828786]
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Tissue distribution of vista5251
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Transcription factor that possibly regulate vista5251[chr1:222828361-222828786]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 222828256 222828614 RUNX3 UCSC Txn Factor no Conserved 107872807
chr1 222828270 222828636 NFIC UCSC Txn Factor no Conserved 107872814
chr1 222828275 222828620 ATF2 UCSC Txn Factor no Conserved 107872817
chr1 222828434 222828449 SCRT1 JASPAR yes 118465982
chr1 222828436 222828449 SCRT2 JASPAR yes 118465983
chr1 222828436 222828454 IRF2 JASPAR yes 118465984
chr1 222828437 222828458 IRF1 JASPAR yes 118465985
chr1 222828439 222828454 PRDM1 JASPAR yes 118465986
chr1 222828439 222828454 STAT2 JASPAR yes 118465987
chr1 222828440 222828454 STAT1 JASPAR yes 118465988
chr1 222828441 222828453 IRF1 JASPAR yes 118465989
chr1 222828441 222828455 IRF7 JASPAR yes 118465990
chr1 222828441 222828455 IRF8 JASPAR yes 118465991
chr1 222828441 222828456 IRF9 JASPAR yes 118465992
chr1 222828443 222828464 IRF1 JASPAR yes 118465993
chr1 222828445 222828460 PRDM1 JASPAR yes 118465994
chr1 222828445 222828460 STAT2 JASPAR yes 118465995
chr1 222828446 222828460 STAT1 JASPAR yes 118465996
chr1 222828450 222828455 ETS2 TRANSFAC yes 118465997
chr1 222828454 222828469 RUNX2 JASPAR yes 118465998
chr1 222828457 222828463 SOX10 JASPAR yes 118465999
chr1 222828458 222828468 RUNX3 JASPAR yes 118466000
chr1 222828461 222828477 POU4F2 JASPAR yes 118466001
chr1 222828461 222828477 POU4F3 JASPAR yes 118466002
chr1 222828463 222828467 ESR1 TRANSFAC yes 118466003
chr1 222828463 222828477 POU4F1 JASPAR yes 118466004
chr1 222828467 222828478 CEBPA JASPAR yes 118466005
chr1 222828467 222828479 DBP JASPAR yes 118466006
chr1 222828467 222828479 HLF JASPAR yes 118466007
chr1 222828467 222828479 TEF JASPAR yes 118466008
chr1 222828468 222828479 CEBPB JASPAR yes 118466009
chr1 222828469 222828480 NFIL3 JASPAR yes 118466010
chr1 222828476 222828484 FEV JASPAR yes 118466011
chr1 222828477 222828488 STAT1 JASPAR yes 118466012
chr1 222828478 222828483 ETS2 TRANSFAC yes 118466013
chr1 222828503 222828517 CREB3 JASPAR yes 118466014
chr1 222828504 222828518 XBP1 JASPAR yes 118466015
chr1 222828506 222828511 ATF1 TRANSFAC yes 118466016
chr1 222828527 222828541 TCF7L2 JASPAR yes 118466017
chr1 222828527 222828545 SRF JASPAR yes 118466018
chr1 222828534 222828548 STAT1 JASPAR yes 118466019
chr1 222828534 222828549 PRDM1 JASPAR yes 118466020
chr1 222828535 222828550 PRDM1 JASPAR yes 118466021
chr1 222828538 222828543 ETS2 TRANSFAC yes 118466022
chr1 222828543 222828554 FOXB1 JASPAR yes 118466023
chr1 222828543 222828554 PROP1 JASPAR yes 118466024
chr1 222828543 222828555 POU3F2 JASPAR yes 118466025
chr1 222828543 222828556 POU3F3 JASPAR yes 118466026
chr1 222828547 222828554 NKX3-1 JASPAR yes 118466027
chr1 222828553 222828558 MYB TRANSFAC yes 118466028
chr1 222828558 222828573 AR JASPAR yes 118466029
chr1 222828563 222828567 YY1 TRANSFAC yes 118466030
chr1 222828583 222828599 POU4F3 JASPAR yes 118466031
chr1 222828585 222828599 POU4F1 JASPAR yes 118466032
chr1 222828590 222828604 POU1F1 JASPAR yes 118466033
chr1 222828597 222828609 FOXC2 JASPAR yes 118466034
chr1 222828598 222828610 FOXI1 JASPAR yes 118466035
chr1 222828601 222828609 FOXL1 JASPAR yes 118466036
chr1 222828646 222828650 YY1 TRANSFAC yes 118466037
chr1 222828653 222828668 MEF2A JASPAR yes 118466038
chr1 222828655 222828667 MEF2A JASPAR yes 118466039
chr1 222828655 222828667 MEF2B JASPAR yes 118466040
chr1 222828655 222828667 MEF2D JASPAR yes 118466041
chr1 222828656 222828668 FOXI1 JASPAR yes 118466042
chr1 222828658 222828669 FOXB1 JASPAR yes 118466043
chr1 222828658 222828669 FOXC1 JASPAR yes 118466044
chr1 222828659 222828663 YY1 TRANSFAC yes 118466045
chr1 222828662 222828680 NR3C1 JASPAR yes 118466046
chr1 222828668 222828678 GSC2 JASPAR yes 118466047
chr1 222828669 222828677 OTX2 JASPAR yes 118466048
chr1 222828681 222828689 FOXL1 JASPAR yes 118466049
chr1 222828720 222828735 MEF2A JASPAR yes 118466050
chr1 222828722 222828734 MEF2A JASPAR yes 118466051
chr1 222828723 222828734 FOXC1 JASPAR yes 118466052
chr1 222828724 222828728 YY1 TRANSFAC yes 118466053
chr1 222828726 222828736 HOXA13 JASPAR yes 118466054
chr1 222828727 222828738 CDX2 JASPAR yes 118466055
chr1 222828755 222828768 ZBTB18 JASPAR yes 118466056
chr1 222828767 222828782 MEF2C JASPAR yes 118466057
chr1 222828768 222828783 MEF2A JASPAR yes 118466058
chr1 222828769 222828781 MEF2A JASPAR yes 118466059
chr1 222828769 222828781 MEF2B JASPAR yes 118466060
chr1 222828769 222828781 MEF2D JASPAR yes 118466061
chr1 222828770 222828780 MEF2A JASPAR yes 118466062
SNP sites on vista5251[chr1:222828361-222828786]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 222828373 rs73124845 G A
ATF2 NFIC RUNX3
972421
chr1 222828519 rs191170980 G C
ATF2 NFIC RUNX3
972422
chr1 222828589 rs3008627 A C
ATF2 NFIC POU4F1 POU4F3 RUNX3
972423
chr1 222828669 rs75581211 A G
FOXB1 FOXC1 GSC2 NR3C1 OTX2
972424
chr1 222828695 rs539881393 A G no 972425
chr1 222828704 rs17163363 C T no 972426
Genes possibly regulated by vista5251[chr1:222828361-222828786]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 222731244 222763275 - TAF1A ENSG00000143498.13 222763275 0.67 0.99 1865 34914
chr1 222791428 222841354 + MIA3 ENSG00000154305.12 222791428 0.75 0.99 1866 63067
chr1 222841355 222886552 - AIDA ENSG00000186063.8 222886552 0.69 0.97 1867 42234
chr1 222885895 222908538 + BROX ENSG00000162819.7 222885895 0.71 0.98 1868 42891
chr1 222910549 222924147 + FAM177B ENSG00000197520.6 222910549 0.95 0.92 1869 18237
Expression level of Genes
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miRNAs possibly regulated by vista5251[chr1:222828361-222828786]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results