EnhancerDB
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  3. vista5259[chr1:223276523-223276867]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5259[chr1:223276523-223276867]
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Tissue distribution of vista5259
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Transcription factor that possibly regulate vista5259[chr1:223276523-223276867]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223276544 223276968 GATA2 UCSC Txn Factor no Conserved 107872905
chr1 223276651 223276791 GATA3 UCSC Txn Factor no Conserved 107872908
chr1 223276511 223276523 E2F1 JASPAR yes 35640306
chr1 223276511 223276523 E2F1 JASPAR yes 118466257
chr1 223276519 223276523 TEAD2 TRANSFAC yes 35640307
chr1 223276519 223276523 TEAD2 TRANSFAC yes 118466258
chr1 223276529 223276541 NHLH1 JASPAR yes 35640308
chr1 223276529 223276541 NHLH1 JASPAR yes 118466259
chr1 223276530 223276540 NHLH1 JASPAR yes 35640309
chr1 223276530 223276540 NHLH1 JASPAR yes 118466260
chr1 223276536 223276541 TFAP2A TRANSFAC yes 35640310
chr1 223276536 223276541 TFAP2A TRANSFAC yes 118466261
chr1 223276536 223276542 MZF1 JASPAR yes 35640311
chr1 223276536 223276542 MZF1 JASPAR yes 118466262
chr1 223276538 223276543 ETS2 TRANSFAC yes 35640312
chr1 223276538 223276543 ETS2 TRANSFAC yes 118466263
chr1 223276545 223276550 SP1 TRANSFAC yes 35640313
chr1 223276545 223276550 SP1 TRANSFAC yes 118466264
chr1 223276551 223276561 POU6F2 JASPAR yes 35640314
chr1 223276551 223276561 POU6F2 JASPAR yes 118466265
chr1 223276552 223276562 EMX1 JASPAR yes 35640315
chr1 223276552 223276562 EMX1 JASPAR yes 118466266
chr1 223276553 223276561 NKX6-1 JASPAR yes 35640316
chr1 223276553 223276561 NKX6-2 JASPAR yes 35640317
chr1 223276553 223276561 NKX6-1 JASPAR yes 118466267
chr1 223276553 223276561 NKX6-2 JASPAR yes 118466268
chr1 223276555 223276559 YY1 TRANSFAC yes 35640318
chr1 223276555 223276559 YY1 TRANSFAC yes 118466269
chr1 223276564 223276575 ESRRA JASPAR yes 35640319
chr1 223276564 223276575 ESRRB JASPAR yes 35640320
chr1 223276564 223276575 ESRRA JASPAR yes 118466270
chr1 223276564 223276575 ESRRB JASPAR yes 118466271
chr1 223276564 223276577 NR2F1 JASPAR yes 35640321
chr1 223276564 223276577 NR2F1 JASPAR yes 118466272
chr1 223276566 223276574 NR4A2 JASPAR yes 35640322
chr1 223276566 223276574 NR4A2 JASPAR yes 118466273
chr1 223276568 223276572 ESR1 TRANSFAC yes 35640323
chr1 223276568 223276572 ESR1 TRANSFAC yes 118466274
chr1 223276572 223276582 NFATC3 JASPAR yes 35640324
chr1 223276572 223276582 NFATC3 JASPAR yes 118466275
chr1 223276574 223276581 NFATC2 JASPAR yes 35640325
chr1 223276574 223276581 NFATC2 JASPAR yes 118466276
chr1 223276590 223276598 NR4A2 JASPAR yes 35640326
chr1 223276590 223276598 NR4A2 JASPAR yes 118466277
chr1 223276591 223276599 CREB1 JASPAR yes 35640327
chr1 223276591 223276599 CREB1 JASPAR yes 118466278
chr1 223276593 223276607 PAX6 JASPAR yes 35640328
chr1 223276593 223276607 PAX6 JASPAR yes 118466279
chr1 223276606 223276619 TFAP2A JASPAR yes 35640329
chr1 223276606 223276619 TFAP2B JASPAR yes 35640330
chr1 223276606 223276619 TFAP2C JASPAR yes 35640331
chr1 223276606 223276619 TFAP2A JASPAR yes 118466280
chr1 223276606 223276619 TFAP2B JASPAR yes 118466281
chr1 223276606 223276619 TFAP2C JASPAR yes 118466282
chr1 223276659 223276669 SP1 JASPAR yes 35640332
chr1 223276659 223276669 SP1 JASPAR yes 118466283
chr1 223276678 223276690 NHLH1 JASPAR yes 35640333
chr1 223276678 223276690 NHLH1 JASPAR yes 118466284
chr1 223276679 223276689 ID4 JASPAR yes 35640334
chr1 223276679 223276689 NHLH1 JASPAR yes 35640335
chr1 223276679 223276689 TCF3 JASPAR yes 35640336
chr1 223276679 223276689 TCF4 JASPAR yes 35640337
chr1 223276679 223276689 ID4 JASPAR yes 118466285
chr1 223276679 223276689 NHLH1 JASPAR yes 118466286
chr1 223276679 223276689 TCF3 JASPAR yes 118466287
chr1 223276679 223276689 TCF4 JASPAR yes 118466288
chr1 223276680 223276689 SNAI2 JASPAR yes 35640338
chr1 223276680 223276689 SNAI2 JASPAR yes 118466289
chr1 223276681 223276686 USF2 TRANSFAC yes 35640339
chr1 223276681 223276686 USF2 TRANSFAC yes 118466290
chr1 223276684 223276695 FLI1 JASPAR yes 35640340
chr1 223276684 223276695 FLI1 JASPAR yes 118466291
chr1 223276694 223276712 ESR1 JASPAR yes 35640341
chr1 223276694 223276712 ESR1 JASPAR yes 118466292
chr1 223276704 223276709 SP1 TRANSFAC yes 35640342
chr1 223276704 223276709 SP1 TRANSFAC yes 118466293
chr1 223276704 223276718 PLAG1 JASPAR yes 35640343
chr1 223276704 223276718 PLAG1 JASPAR yes 118466294
chr1 223276712 223276721 JDP2 JASPAR yes 35640344
chr1 223276712 223276721 JDP2 JASPAR yes 118466295
chr1 223276715 223276730 JUND JASPAR yes 35640345
chr1 223276715 223276730 JUND JASPAR yes 118466296
chr1 223276716 223276729 JUN JASPAR yes 35640346
chr1 223276716 223276729 JUN JASPAR yes 118466297
chr1 223276717 223276731 ATF7 JASPAR yes 35640347
chr1 223276717 223276731 BATF3 JASPAR yes 35640348
chr1 223276717 223276731 ATF7 JASPAR yes 118466298
chr1 223276717 223276731 BATF3 JASPAR yes 118466299
chr1 223276718 223276730 JDP2 JASPAR yes 35640349
chr1 223276718 223276730 JDP2 JASPAR yes 118466300
chr1 223276718 223276733 JUND JASPAR yes 35640350
chr1 223276718 223276733 JUND JASPAR yes 118466301
chr1 223276724 223276738 ONECUT1 JASPAR yes 35640351
chr1 223276724 223276738 ONECUT2 JASPAR yes 35640352
chr1 223276724 223276738 ONECUT3 JASPAR yes 35640353
chr1 223276724 223276738 ONECUT1 JASPAR yes 118466302
chr1 223276724 223276738 ONECUT2 JASPAR yes 118466303
chr1 223276724 223276738 ONECUT3 JASPAR yes 118466304
chr1 223276729 223276743 GATA2 JASPAR yes 35640354
chr1 223276729 223276743 GATA2 JASPAR yes 118466305
chr1 223276732 223276743 HOXA10 JASPAR yes 35640355
chr1 223276732 223276743 HOXA10 JASPAR yes 118466306
chr1 223276744 223276752 EHF JASPAR yes 35640356
chr1 223276744 223276752 EHF JASPAR yes 118466307
chr1 223276750 223276755 TFAP2A TRANSFAC yes 35640357
chr1 223276750 223276755 TFAP2A TRANSFAC yes 118466308
chr1 223276750 223276756 MZF1 JASPAR yes 35640358
chr1 223276750 223276756 MZF1 JASPAR yes 118466309
chr1 223276759 223276774 FOXP1 JASPAR yes 35640359
chr1 223276759 223276774 FOXP1 JASPAR yes 118466310
chr1 223276762 223276773 FOXP2 JASPAR yes 35640360
chr1 223276762 223276773 FOXP2 JASPAR yes 118466311
chr1 223276763 223276771 FOXO3 JASPAR yes 35640361
chr1 223276763 223276771 FOXO3 JASPAR yes 118466312
chr1 223276771 223276776 SP1 TRANSFAC yes 35640362
chr1 223276771 223276776 SP1 TRANSFAC yes 118466313
chr1 223276797 223276811 STAT1 JASPAR yes 35640363
chr1 223276797 223276811 STAT1 JASPAR yes 118466314
chr1 223276797 223276812 STAT2 JASPAR yes 35640364
chr1 223276797 223276812 STAT2 JASPAR yes 118466315
chr1 223276805 223276811 HiNF-A TRANSFAC yes 35640365
chr1 223276805 223276811 HiNF-A TRANSFAC yes 118466316
chr1 223276818 223276836 TP63 JASPAR yes 35640366
chr1 223276818 223276836 TP63 JASPAR yes 118466317
chr1 223276832 223276836 H4TF2 TRANSFAC yes 35640367
chr1 223276832 223276836 H4TF2 TRANSFAC yes 118466318
SNP sites on vista5259[chr1:223276523-223276867]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 223276602 rs540152581 C G,T
GATA2 PAX6
974976
chr1 223276713 rs35251562 G A
GATA2 GATA3 JDP2 PLAG1
974977
chr1 223276796 rs541533973 C T
GATA2
974978
Genes possibly regulated by vista5259[chr1:223276523-223276867]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223282748 223316624 - TLR5 ENSG00000187554.7 223316624 0.86 1.0 1871 60243
Expression level of Genes
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miRNAs possibly regulated by vista5259[chr1:223276523-223276867]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results