EnhancerDB
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  3. vista52621[chr6:82956000-82956181]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52621[chr6:82956000-82956181]
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Tissue distribution of vista52621
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Transcription factor that possibly regulate vista52621[chr6:82956000-82956181]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 82956034 82956053 PAX5 JASPAR yes 70394384
chr6 82956053 82956068 MEF2A JASPAR yes 70394385
chr6 82956054 82956069 MEF2C JASPAR yes 70394386
chr6 82956055 82956067 MEF2B JASPAR yes 70394387
chr6 82956055 82956067 MEF2D JASPAR yes 70394388
chr6 82956057 82956061 YY1 TRANSFAC yes 70394389
chr6 82956072 82956085 NFKB1 JASPAR yes 70394390
chr6 82956072 82956085 NFKB2 JASPAR yes 70394391
chr6 82956091 82956109 RARA JASPAR yes 70394392
chr6 82956098 82956111 NR2F1 JASPAR yes 70394393
chr6 82956102 82956110 CREB1 JASPAR yes 70394394
chr6 82956116 82956121 SP1 TRANSFAC yes 70394395
chr6 82956119 82956133 PLAG1 JASPAR yes 70394396
chr6 82956124 82956131 E2F1 TRANSFAC yes 70394397
chr6 82956152 82956173 IRF1 JASPAR yes 70394398
chr6 82956154 82956175 IRF1 JASPAR yes 70394399
chr6 82956155 82956170 FOXP1 JASPAR yes 70394400
chr6 82956155 82956176 IRF1 JASPAR yes 70394401
chr6 82956156 82956177 IRF1 JASPAR yes 70394402
chr6 82956157 82956172 FOXP1 JASPAR yes 70394403
chr6 82956157 82956178 IRF1 JASPAR yes 70394404
chr6 82956158 82956173 FOXP1 JASPAR yes 70394405
chr6 82956158 82956179 IRF1 JASPAR yes 70394406
chr6 82956159 82956174 FOXP1 JASPAR yes 70394407
chr6 82956159 82956180 IRF1 JASPAR yes 70394408
chr6 82956160 82956175 FOXP1 JASPAR yes 70394409
chr6 82956161 82956176 FOXP1 JASPAR yes 70394410
chr6 82956162 82956177 FOXP1 JASPAR yes 70394411
chr6 82956163 82956178 FOXP1 JASPAR yes 70394412
chr6 82956164 82956179 FOXP1 JASPAR yes 70394413
chr6 82956165 82956180 FOXP1 JASPAR yes 70394414
chr6 82956166 82956181 FOXP1 JASPAR yes 70394415
SNP sites on vista52621[chr6:82956000-82956181]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 82956057 rs568515386 G A
MEF2A MEF2B MEF2C MEF2D YY1
9159921
chr6 82956095 rs185825292 C G
RARA
9159922
chr6 82956096 rs376036987 GA G
RARA
9159923
chr6 82956106 rs141975373 C T
CREB1 NR2F1 RARA
9159924
chr6 82956156 rs558133529 A ATC
FOXP1 IRF1
9159925
Genes possibly regulated by vista52621[chr6:82956000-82956181]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 82879700 82957471 - IBTK ENSG00000005700.10 82957471 0.61 0.99 6761 98710
Expression level of Genes
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miRNAs possibly regulated by vista52621[chr6:82956000-82956181]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results