EnhancerDB
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  3. vista5263[chr1:223353221-223353544]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5263[chr1:223353221-223353544]
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Tissue distribution of vista5263
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Transcription factor that possibly regulate vista5263[chr1:223353221-223353544]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223353206 223353221 JUND JASPAR yes 35645592
chr1 223353206 223353221 JUND JASPAR yes 118466441
chr1 223353225 223353235 MAX JASPAR yes 35645593
chr1 223353225 223353235 MAX JASPAR yes 118466442
chr1 223353227 223353240 ZBTB18 JASPAR yes 35645594
chr1 223353227 223353240 ZBTB18 JASPAR yes 118466443
chr1 223353228 223353239 USF2 JASPAR yes 35645595
chr1 223353228 223353239 USF2 JASPAR yes 118466444
chr1 223353229 223353239 MAX JASPAR yes 35645596
chr1 223353229 223353239 MAX JASPAR yes 118466445
chr1 223353245 223353256 HOXA10 JASPAR yes 35645597
chr1 223353245 223353256 HOXA10 JASPAR yes 118466446
chr1 223353246 223353255 CDX1 JASPAR yes 35645598
chr1 223353246 223353255 CDX1 JASPAR yes 118466447
chr1 223353246 223353257 CDX2 JASPAR yes 35645599
chr1 223353246 223353257 CDX2 JASPAR yes 118466448
chr1 223353262 223353268 ZNF354C JASPAR yes 35645600
chr1 223353262 223353268 ZNF354C JASPAR yes 118466449
chr1 223353275 223353285 SP1 JASPAR yes 35645601
chr1 223353275 223353285 SP1 JASPAR yes 118466450
chr1 223353305 223353309 H1TF2 TRANSFAC yes 35645602
chr1 223353305 223353309 NFE TRANSFAC yes 35645603
chr1 223353305 223353309 SRF TRANSFAC yes 35645604
chr1 223353305 223353309 H1TF2 TRANSFAC yes 118466451
chr1 223353305 223353309 NFE TRANSFAC yes 118466452
chr1 223353305 223353309 SRF TRANSFAC yes 118466453
chr1 223353307 223353321 EBF1 JASPAR yes 35645605
chr1 223353307 223353321 EBF1 JASPAR yes 118466454
chr1 223353329 223353341 GLI2 JASPAR yes 35645606
chr1 223353329 223353341 GLI2 JASPAR yes 118466455
chr1 223353336 223353348 TEAD1 JASPAR yes 35645607
chr1 223353336 223353348 TEAD1 JASPAR yes 118466456
chr1 223353367 223353373 ZNF354C JASPAR yes 35645608
chr1 223353367 223353373 ZNF354C JASPAR yes 118466457
chr1 223353368 223353378 RELA JASPAR yes 35645609
chr1 223353368 223353378 REL JASPAR yes 35645610
chr1 223353368 223353378 RELA JASPAR yes 118466458
chr1 223353368 223353378 REL JASPAR yes 118466459
chr1 223353368 223353379 NFKB1 JASPAR yes 35645611
chr1 223353368 223353379 NFKB1 JASPAR yes 118466460
chr1 223353373 223353384 STAT3 JASPAR yes 35645612
chr1 223353373 223353384 STAT3 JASPAR yes 118466461
chr1 223353387 223353397 TFEB JASPAR yes 35645613
chr1 223353387 223353397 TFEC JASPAR yes 35645614
chr1 223353387 223353397 TFEB JASPAR yes 118466462
chr1 223353387 223353397 TFEC JASPAR yes 118466463
chr1 223353387 223353398 USF1 JASPAR yes 35645615
chr1 223353387 223353398 USF2 JASPAR yes 35645616
chr1 223353387 223353398 USF1 JASPAR yes 118466464
chr1 223353387 223353398 USF2 JASPAR yes 118466465
chr1 223353388 223353398 MAX JASPAR yes 35645617
chr1 223353388 223353398 MAX JASPAR yes 118466466
chr1 223353389 223353402 NR2F1 JASPAR yes 35645618
chr1 223353389 223353402 NR2F1 JASPAR yes 118466467
chr1 223353391 223353402 ESRRA JASPAR yes 35645619
chr1 223353391 223353402 ESRRB JASPAR yes 35645620
chr1 223353391 223353402 ESRRA JASPAR yes 118466468
chr1 223353391 223353402 ESRRB JASPAR yes 118466469
chr1 223353392 223353400 NR4A2 JASPAR yes 35645621
chr1 223353392 223353400 NR4A2 JASPAR yes 118466470
chr1 223353392 223353406 RORA JASPAR yes 35645622
chr1 223353392 223353406 RORA JASPAR yes 118466471
chr1 223353393 223353403 RORA JASPAR yes 35645623
chr1 223353393 223353403 RORA JASPAR yes 118466472
chr1 223353403 223353414 DUX4 JASPAR yes 35645624
chr1 223353403 223353414 DUX4 JASPAR yes 118466473
chr1 223353404 223353419 JUND JASPAR yes 35645625
chr1 223353404 223353419 JUND JASPAR yes 118466474
chr1 223353405 223353418 JUN JASPAR yes 35645626
chr1 223353405 223353418 JUN JASPAR yes 118466475
chr1 223353410 223353420 TFEC JASPAR yes 35645627
chr1 223353410 223353420 TFEC JASPAR yes 118466476
chr1 223353414 223353429 PRDM1 JASPAR yes 35645628
chr1 223353414 223353429 PRDM1 JASPAR yes 118466477
chr1 223353466 223353476 MAX JASPAR yes 35645629
chr1 223353466 223353476 MAX JASPAR yes 118466478
chr1 223353466 223353477 USF1 JASPAR yes 35645630
chr1 223353466 223353477 USF2 JASPAR yes 35645631
chr1 223353466 223353477 USF1 JASPAR yes 118466479
chr1 223353466 223353477 USF2 JASPAR yes 118466480
chr1 223353473 223353478 TFAP2A TRANSFAC yes 35645632
chr1 223353473 223353478 TFAP2A TRANSFAC yes 118466481
chr1 223353473 223353479 MZF1 JASPAR yes 35645633
chr1 223353473 223353479 MZF1 JASPAR yes 118466482
chr1 223353490 223353494 H4TF2 TRANSFAC yes 35645634
chr1 223353490 223353494 H4TF2 TRANSFAC yes 118466483
chr1 223353518 223353522 H1TF2 TRANSFAC yes 35645635
chr1 223353518 223353522 NFE TRANSFAC yes 35645636
chr1 223353518 223353522 SRF TRANSFAC yes 35645637
chr1 223353518 223353522 H1TF2 TRANSFAC yes 118466484
chr1 223353518 223353522 NFE TRANSFAC yes 118466485
chr1 223353518 223353522 SRF TRANSFAC yes 118466486
chr1 223353518 223353524 NFYC TRANSFAC yes 35645638
chr1 223353518 223353524 NFYC TRANSFAC yes 118466487
chr1 223353539 223353545 LEF1 TRANSFAC yes 35645639
chr1 223353539 223353545 SOX10 JASPAR yes 35645640
chr1 223353539 223353545 LEF1 TRANSFAC yes 118466488
chr1 223353539 223353545 SOX10 JASPAR yes 118466489
SNP sites on vista5263[chr1:223353221-223353544]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 223353268 rs147861012 C T
ZNF354C
975585
chr1 223353269 rs61837573 G A no 975586
chr1 223353343 rs851168 A G
TEAD1
975587
chr1 223353500 rs185538660 C A no 975588
chr1 223353501 rs571939225 C T no 975589
chr1 223353522 rs141315690 A G
H1TF2 NFE NFYC SRF
975590
chr1 223353536 rs80131525 C T no 975591
Genes possibly regulated by vista5263[chr1:223353221-223353544]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223282748 223316624 - TLR5 ENSG00000187554.7 223316624 0.86 1.0 1871 63403
Expression level of Genes
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miRNAs possibly regulated by vista5263[chr1:223353221-223353544]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results