EnhancerDB
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  3. vista52650[chr6:84601276-84601399]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52650[chr6:84601276-84601399]
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Tissue distribution of vista52650
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Transcription factor that possibly regulate vista52650[chr6:84601276-84601399]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 84601276 84601287 CEBPA JASPAR yes 70395547
chr6 84601277 84601292 MEF2A JASPAR yes 70395548
chr6 84601280 84601290 EMX1 JASPAR yes 70395549
chr6 84601280 84601290 EMX2 JASPAR yes 70395550
chr6 84601280 84601290 EVX1 JASPAR yes 70395551
chr6 84601280 84601290 EVX2 JASPAR yes 70395552
chr6 84601280 84601290 HESX1 JASPAR yes 70395553
chr6 84601280 84601290 HOXA2 JASPAR yes 70395554
chr6 84601280 84601290 HOXB2 JASPAR yes 70395555
chr6 84601280 84601290 LHX2 JASPAR yes 70395556
chr6 84601280 84601290 LHX6 JASPAR yes 70395557
chr6 84601280 84601290 MEOX1 JASPAR yes 70395558
chr6 84601280 84601290 MEOX2 JASPAR yes 70395559
chr6 84601280 84601290 NOTO JASPAR yes 70395560
chr6 84601281 84601289 LBX1 JASPAR yes 70395561
chr6 84601281 84601289 PDX1 JASPAR yes 70395562
chr6 84601281 84601289 VAX1 JASPAR yes 70395563
chr6 84601281 84601289 VAX2 JASPAR yes 70395564
chr6 84601281 84601289 VSX1 JASPAR yes 70395565
chr6 84601281 84601289 VSX2 JASPAR yes 70395566
chr6 84601281 84601291 POU6F2 JASPAR yes 70395567
chr6 84601281 84601295 POU1F1 JASPAR yes 70395568
chr6 84601282 84601295 POU3F3 JASPAR yes 70395569
chr6 84601297 84601300 MYB TRANSFAC yes 70395570
chr6 84601310 84601325 LEF1 JASPAR yes 70395571
chr6 84601345 84601349 YY1 TRANSFAC yes 70395572
chr6 84601349 84601352 MYB TRANSFAC yes 70395573
chr6 84601361 84601366 ETS2 TRANSFAC yes 70395574
chr6 84601375 84601380 GATA2 JASPAR yes 70395575
chr6 84601380 84601390 TEAD1 JASPAR yes 70395576
chr6 84601380 84601390 TEAD4 JASPAR yes 70395577
chr6 84601380 84601392 TEAD1 JASPAR yes 70395578
chr6 84601381 84601389 TEAD3 JASPAR yes 70395579
SNP sites on vista52650[chr6:84601276-84601399]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 84601341 rs61762805 G A no 9164599
Genes possibly regulated by vista52650[chr6:84601276-84601399]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 84562985 84567234 + RIPPLY2 ENSG00000203877.3 84562985 0.89 0.99 6771 61709
chr6 84569362 84677143 + CYB5R4 ENSG00000065615.9 84569362 0.89 0.99 6772 68086
Expression level of Genes
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miRNAs possibly regulated by vista52650[chr6:84601276-84601399]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results