EnhancerDB
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  3. vista5266[chr1:223362227-223362396]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5266[chr1:223362227-223362396]
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Tissue distribution of vista5266
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Transcription factor that possibly regulate vista5266[chr1:223362227-223362396]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223362230 223362246 ZNF143 JASPAR yes 35646769
chr1 223362230 223362246 ZNF143 JASPAR yes 118466591
chr1 223362235 223362241 SOX10 JASPAR yes 35646770
chr1 223362235 223362241 SOX10 JASPAR yes 118466592
chr1 223362252 223362257 SP1 TRANSFAC yes 35646771
chr1 223362252 223362257 SP1 TRANSFAC yes 118466593
chr1 223362255 223362259 LFA1 TRANSFAC yes 35646772
chr1 223362255 223362259 LFA1 TRANSFAC yes 118466594
chr1 223362264 223362275 FOXH1 JASPAR yes 35646773
chr1 223362264 223362275 FOXH1 JASPAR yes 118466595
chr1 223362265 223362271 ZNF354C JASPAR yes 35646774
chr1 223362265 223362271 ZNF354C JASPAR yes 118466596
chr1 223362300 223362314 GLIS3 JASPAR yes 35646775
chr1 223362300 223362314 ZIC1 JASPAR yes 35646776
chr1 223362300 223362314 GLIS3 JASPAR yes 118466597
chr1 223362300 223362314 ZIC1 JASPAR yes 118466598
chr1 223362300 223362315 ZIC3 JASPAR yes 35646777
chr1 223362300 223362315 ZIC4 JASPAR yes 35646778
chr1 223362300 223362315 ZIC3 JASPAR yes 118466599
chr1 223362300 223362315 ZIC4 JASPAR yes 118466600
chr1 223362303 223362319 ZNF143 JASPAR yes 35646779
chr1 223362303 223362319 ZNF143 JASPAR yes 118466601
chr1 223362319 223362331 INSM1 JASPAR yes 35646780
chr1 223362319 223362331 INSM1 JASPAR yes 118466602
chr1 223362342 223362348 NFE2 TRANSFAC yes 35646781
chr1 223362342 223362348 NFE2 TRANSFAC yes 118466603
chr1 223362352 223362370 ESR1 JASPAR yes 35646782
chr1 223362352 223362370 ESR1 JASPAR yes 118466604
chr1 223362363 223362374 E2F6 JASPAR yes 35646783
chr1 223362363 223362374 E2F6 JASPAR yes 118466605
chr1 223362367 223362378 E2F6 JASPAR yes 35646784
chr1 223362367 223362378 E2F6 JASPAR yes 118466606
chr1 223362375 223362381 TCF4 TRANSFAC yes 35646785
chr1 223362375 223362381 TCF4 TRANSFAC yes 118466607
chr1 223362379 223362388 HIC2 JASPAR yes 35646786
chr1 223362379 223362388 HIC2 JASPAR yes 118466608
chr1 223362382 223362386 LFA1 TRANSFAC yes 35646787
chr1 223362382 223362386 LFA1 TRANSFAC yes 118466609
chr1 223362391 223362397 SOX10 JASPAR yes 35646788
chr1 223362391 223362397 SOX10 JASPAR yes 118466610
chr1 223362391 223362410 CTCF JASPAR yes 35646789
chr1 223362391 223362410 CTCF JASPAR yes 118466611
SNP sites on vista5266[chr1:223362227-223362396]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 223362285 rs192846444 C G no 975678
chr1 223362286 rs67947164 T C no 975679
chr1 223362294 rs72743881 G A no 975680
chr1 223362303 rs79312349 C T
GLIS3 ZIC1 ZIC3 ZIC4 ZNF143
975681
chr1 223362320 rs73120236 C T
INSM1
975682
chr1 223362325 rs142681609 G A
INSM1
975683
Genes possibly regulated by vista5266[chr1:223362227-223362396]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223282748 223316624 - TLR5 ENSG00000187554.7 223316624 0.86 1.0 1871 54397
Expression level of Genes
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miRNAs possibly regulated by vista5266[chr1:223362227-223362396]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results