EnhancerDB
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  3. vista52662[chr6:85484432-85484730]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52662[chr6:85484432-85484730]
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Tissue distribution of vista52662
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Transcription factor that possibly regulate vista52662[chr6:85484432-85484730]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 85484428 85485055 CTCF UCSC Txn Factor no Conserved 108540902
chr6 85484466 85484756 RAD21 UCSC Txn Factor no Conserved 108540903
chr6 85484448 85484453 SP1 TRANSFAC yes 70395919
chr6 85484448 85484453 SP1 TRANSFAC yes 103231432
chr6 85484457 85484477 RREB1 JASPAR yes 70395920
chr6 85484457 85484477 RREB1 JASPAR yes 103231433
chr6 85484460 85484480 RREB1 JASPAR yes 70395921
chr6 85484460 85484480 RREB1 JASPAR yes 103231434
chr6 85484463 85484468 SP1 TRANSFAC yes 70395922
chr6 85484463 85484468 SP1 TRANSFAC yes 103231435
chr6 85484464 85484474 SP1 JASPAR yes 70395923
chr6 85484464 85484474 SP1 JASPAR yes 103231436
chr6 85484465 85484485 RREB1 JASPAR yes 70395924
chr6 85484465 85484485 RREB1 JASPAR yes 103231437
chr6 85484469 85484479 ZNF740 JASPAR yes 70395925
chr6 85484469 85484479 ZNF740 JASPAR yes 103231438
chr6 85484472 85484482 REL JASPAR yes 70395926
chr6 85484472 85484482 REL JASPAR yes 103231439
chr6 85484472 85484483 NFKB1 JASPAR yes 70395927
chr6 85484472 85484483 NFKB1 JASPAR yes 103231440
chr6 85484478 85484498 TP63 JASPAR yes 70395928
chr6 85484478 85484498 TP63 JASPAR yes 103231441
chr6 85484497 85484507 SP1 JASPAR yes 70395929
chr6 85484497 85484507 SP1 JASPAR yes 103231442
chr6 85484530 85484534 LFA1 TRANSFAC yes 70395930
chr6 85484530 85484534 LFA1 TRANSFAC yes 103231443
chr6 85484531 85484541 EMX1 JASPAR yes 70395931
chr6 85484531 85484541 EN2 JASPAR yes 70395932
chr6 85484531 85484541 GBX1 JASPAR yes 70395933
chr6 85484531 85484541 GBX2 JASPAR yes 70395934
chr6 85484531 85484541 EMX1 JASPAR yes 103231444
chr6 85484531 85484541 EN2 JASPAR yes 103231445
chr6 85484531 85484541 GBX1 JASPAR yes 103231446
chr6 85484531 85484541 GBX2 JASPAR yes 103231447
chr6 85484532 85484540 BARX1 JASPAR yes 70395935
chr6 85484532 85484540 EN1 JASPAR yes 70395936
chr6 85484532 85484540 ISL2 JASPAR yes 70395937
chr6 85484532 85484540 MSX1 JASPAR yes 70395938
chr6 85484532 85484540 MSX2 JASPAR yes 70395939
chr6 85484532 85484540 PDX1 JASPAR yes 70395940
chr6 85484532 85484540 BARX1 JASPAR yes 103231448
chr6 85484532 85484540 EN1 JASPAR yes 103231449
chr6 85484532 85484540 ISL2 JASPAR yes 103231450
chr6 85484532 85484540 MSX1 JASPAR yes 103231451
chr6 85484532 85484540 MSX2 JASPAR yes 103231452
chr6 85484532 85484540 PDX1 JASPAR yes 103231453
chr6 85484561 85484570 THAP1 JASPAR yes 70395941
chr6 85484561 85484570 THAP1 JASPAR yes 103231454
chr6 85484564 85484569 SP1 TRANSFAC yes 70395942
chr6 85484564 85484569 SP1 TRANSFAC yes 103231455
chr6 85484565 85484570 SP1 TRANSFAC yes 70395943
chr6 85484565 85484570 SP1 TRANSFAC yes 103231456
chr6 85484575 85484587 TFAP2A JASPAR yes 70395944
chr6 85484575 85484587 TFAP2B JASPAR yes 70395945
chr6 85484575 85484587 TFAP2C JASPAR yes 70395946
chr6 85484575 85484587 TFAP2A JASPAR yes 103231457
chr6 85484575 85484587 TFAP2B JASPAR yes 103231458
chr6 85484575 85484587 TFAP2C JASPAR yes 103231459
chr6 85484582 85484586 LFA1 TRANSFAC yes 70395947
chr6 85484582 85484586 LFA1 TRANSFAC yes 103231460
chr6 85484589 85484594 SP1 TRANSFAC yes 70395948
chr6 85484589 85484594 SP1 TRANSFAC yes 103231461
chr6 85484590 85484595 SP1 TRANSFAC yes 70395949
chr6 85484590 85484595 SP1 TRANSFAC yes 103231462
chr6 85484590 85484596 SP1 TRANSFAC yes 70395950
chr6 85484590 85484596 SP1 TRANSFAC yes 103231463
chr6 85484594 85484608 CREB3L1 JASPAR yes 70395951
chr6 85484594 85484608 CREB3L1 JASPAR yes 103231464
chr6 85484595 85484599 LFA1 TRANSFAC yes 70395952
chr6 85484595 85484599 LFA1 TRANSFAC yes 103231465
chr6 85484595 85484605 MAX JASPAR yes 70395953
chr6 85484595 85484605 MAX JASPAR yes 103231466
chr6 85484595 85484606 USF2 JASPAR yes 70395954
chr6 85484595 85484606 USF2 JASPAR yes 103231467
chr6 85484595 85484607 HES5 JASPAR yes 70395955
chr6 85484595 85484607 HES7 JASPAR yes 70395956
chr6 85484595 85484607 HES5 JASPAR yes 103231468
chr6 85484595 85484607 HES7 JASPAR yes 103231469
chr6 85484596 85484606 BHLHE40 JASPAR yes 70395957
chr6 85484596 85484606 HEY1 JASPAR yes 70395958
chr6 85484596 85484606 HEY2 JASPAR yes 70395959
chr6 85484596 85484606 MAX JASPAR yes 70395960
chr6 85484596 85484606 MLX JASPAR yes 70395961
chr6 85484596 85484606 MNT JASPAR yes 70395962
chr6 85484596 85484606 TFE3 JASPAR yes 70395963
chr6 85484596 85484606 TFEB JASPAR yes 70395964
chr6 85484596 85484606 BHLHE40 JASPAR yes 103231470
chr6 85484596 85484606 HEY1 JASPAR yes 103231471
chr6 85484596 85484606 HEY2 JASPAR yes 103231472
chr6 85484596 85484606 MAX JASPAR yes 103231473
chr6 85484596 85484606 MLX JASPAR yes 103231474
chr6 85484596 85484606 MNT JASPAR yes 103231475
chr6 85484596 85484606 TFE3 JASPAR yes 103231476
chr6 85484596 85484606 TFEB JASPAR yes 103231477
chr6 85484598 85484603 MYC TRANSFAC yes 70395965
chr6 85484598 85484603 USF1 TRANSFAC yes 70395966
chr6 85484598 85484603 USF2 TRANSFAC yes 70395967
chr6 85484598 85484603 MYC TRANSFAC yes 103231478
chr6 85484598 85484603 USF1 TRANSFAC yes 103231479
chr6 85484598 85484603 USF2 TRANSFAC yes 103231480
chr6 85484598 85484605 USF1 JASPAR yes 70395968
chr6 85484598 85484605 USF1 JASPAR yes 103231481
chr6 85484602 85484621 CTCF JASPAR yes 70395969
chr6 85484602 85484621 CTCF JASPAR yes 103231482
chr6 85484603 85484617 PLAG1 JASPAR yes 70395970
chr6 85484603 85484617 PLAG1 JASPAR yes 103231483
chr6 85484605 85484618 TFAP2A JASPAR yes 70395971
chr6 85484605 85484618 TFAP2B JASPAR yes 70395972
chr6 85484605 85484618 TFAP2C JASPAR yes 70395973
chr6 85484605 85484618 TFAP2A JASPAR yes 103231484
chr6 85484605 85484618 TFAP2B JASPAR yes 103231485
chr6 85484605 85484618 TFAP2C JASPAR yes 103231486
chr6 85484608 85484619 EBF1 JASPAR yes 70395974
chr6 85484608 85484619 EBF1 JASPAR yes 103231487
chr6 85484612 85484617 TFAP2A TRANSFAC yes 70395975
chr6 85484612 85484617 TFAP2A TRANSFAC yes 103231488
chr6 85484612 85484618 MZF1 JASPAR yes 70395976
chr6 85484612 85484618 MZF1 JASPAR yes 103231489
chr6 85484616 85484628 HINFP JASPAR yes 70395977
chr6 85484616 85484628 HINFP JASPAR yes 103231490
chr6 85484634 85484648 TLX1 JASPAR yes 70395978
chr6 85484634 85484648 TLX1 JASPAR yes 103231491
chr6 85484647 85484652 TFAP2A TRANSFAC yes 70395979
chr6 85484647 85484652 TFAP2A TRANSFAC yes 103231492
chr6 85484647 85484653 MZF1 JASPAR yes 70395980
chr6 85484647 85484653 MZF1 JASPAR yes 103231493
chr6 85484670 85484684 ZIC1 JASPAR yes 70395981
chr6 85484670 85484684 ZIC1 JASPAR yes 103231494
chr6 85484670 85484685 ZIC3 JASPAR yes 70395982
chr6 85484670 85484685 ZIC3 JASPAR yes 103231495
chr6 85484671 85484682 E2F4 JASPAR yes 70395983
chr6 85484671 85484682 E2F4 JASPAR yes 103231496
chr6 85484719 85484734 NR2C2 JASPAR yes 70395984
chr6 85484719 85484734 NR2C2 JASPAR yes 103231497
chr6 85484722 85484728 SP1 TRANSFAC yes 70395985
chr6 85484722 85484728 SP1 TRANSFAC yes 103231498
chr6 85484726 85484736 FIGLA JASPAR yes 70395986
chr6 85484726 85484736 FIGLA JASPAR yes 103231499
chr6 85484728 85484733 USF2 TRANSFAC yes 70395987
chr6 85484728 85484733 USF2 TRANSFAC yes 103231500
SNP sites on vista52662[chr6:85484432-85484730]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 85484449 rs188952777 C A
CTCF SP1
9167201
chr6 85484464 rs543582214 G T
CTCF RREB1 SP1
9167202
chr6 85484583 rs566051593 G A,C
CTCF LFA1 RAD21 TFAP2A TFAP2B TFAP2C
9167203
chr6 85484683 rs215927 T C
CTCF RAD21 ZIC1 ZIC3
9167204
Genes possibly regulated by vista52662[chr6:85484432-85484730]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 85397069 85474237 - TBX18 ENSG00000112837.12 85474237 0.85 0.99 6775 89805
Expression level of Genes
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miRNAs possibly regulated by vista52662[chr6:85484432-85484730]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results