EnhancerDB
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  3. vista52689[chr6:87881047-87881581]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52689[chr6:87881047-87881581]
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Tissue distribution of vista52689
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Transcription factor that possibly regulate vista52689[chr6:87881047-87881581]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 87881072 87881083 ELK4 JASPAR yes 70397036
chr6 87881072 87881083 FLI1 JASPAR yes 70397037
chr6 87881072 87881083 ELK4 JASPAR yes 103303683
chr6 87881072 87881083 FLI1 JASPAR yes 103303684
chr6 87881073 87881083 ETV6 JASPAR yes 70397038
chr6 87881073 87881083 ETV6 JASPAR yes 103303685
chr6 87881073 87881084 ELF5 JASPAR yes 70397039
chr6 87881073 87881084 ELF5 JASPAR yes 103303686
chr6 87881073 87881085 ELF4 JASPAR yes 70397040
chr6 87881073 87881085 ELF4 JASPAR yes 103303687
chr6 87881073 87881086 ELF1 JASPAR yes 70397041
chr6 87881073 87881086 ELF1 JASPAR yes 103303688
chr6 87881074 87881081 SPI1 JASPAR yes 70397042
chr6 87881074 87881081 SPI1 JASPAR yes 103303689
chr6 87881074 87881082 EHF JASPAR yes 70397043
chr6 87881074 87881082 FEV JASPAR yes 70397044
chr6 87881074 87881082 EHF JASPAR yes 103303690
chr6 87881074 87881082 FEV JASPAR yes 103303691
chr6 87881090 87881105 RUNX2 JASPAR yes 70397045
chr6 87881090 87881105 RUNX2 JASPAR yes 103303692
chr6 87881091 87881111 RREB1 JASPAR yes 70397046
chr6 87881091 87881111 RREB1 JASPAR yes 103303693
chr6 87881092 87881112 RREB1 JASPAR yes 70397047
chr6 87881092 87881112 RREB1 JASPAR yes 103303694
chr6 87881094 87881104 RUNX3 JASPAR yes 70397048
chr6 87881094 87881104 RUNX3 JASPAR yes 103303695
chr6 87881094 87881114 RREB1 JASPAR yes 70397049
chr6 87881094 87881114 RREB1 JASPAR yes 103303696
chr6 87881095 87881104 RUNX2 JASPAR yes 70397050
chr6 87881095 87881104 RUNX2 JASPAR yes 103303697
chr6 87881095 87881115 RREB1 JASPAR yes 70397051
chr6 87881095 87881115 RREB1 JASPAR yes 103303698
chr6 87881096 87881116 RREB1 JASPAR yes 70397052
chr6 87881096 87881116 RREB1 JASPAR yes 103303699
chr6 87881099 87881119 RREB1 JASPAR yes 70397053
chr6 87881099 87881119 RREB1 JASPAR yes 103303700
chr6 87881103 87881109 TCF4 TRANSFAC yes 70397054
chr6 87881103 87881109 TCF4 TRANSFAC yes 103303701
chr6 87881104 87881116 FOXC2 JASPAR yes 70397055
chr6 87881104 87881116 FOXC2 JASPAR yes 103303702
chr6 87881106 87881126 RREB1 JASPAR yes 70397056
chr6 87881106 87881126 RREB1 JASPAR yes 103303703
chr6 87881106 87881127 IRF1 JASPAR yes 70397057
chr6 87881106 87881127 IRF1 JASPAR yes 103303704
chr6 87881108 87881123 STAT2 JASPAR yes 70397058
chr6 87881108 87881123 STAT2 JASPAR yes 103303705
chr6 87881110 87881125 IRF9 JASPAR yes 70397059
chr6 87881110 87881125 IRF9 JASPAR yes 103303706
chr6 87881110 87881130 RREB1 JASPAR yes 70397060
chr6 87881110 87881130 RREB1 JASPAR yes 103303707
chr6 87881111 87881132 IRF1 JASPAR yes 70397061
chr6 87881111 87881132 IRF1 JASPAR yes 103303708
chr6 87881117 87881132 FOXA1 JASPAR yes 70397062
chr6 87881117 87881132 FOXA1 JASPAR yes 103303709
chr6 87881118 87881124 TCF4 TRANSFAC yes 70397063
chr6 87881118 87881124 TCF4 TRANSFAC yes 103303710
chr6 87881118 87881130 FOXI1 JASPAR yes 70397064
chr6 87881118 87881130 FOXI1 JASPAR yes 103303711
chr6 87881118 87881133 FOXP1 JASPAR yes 70397065
chr6 87881118 87881133 FOXP1 JASPAR yes 103303712
chr6 87881119 87881131 FOXC2 JASPAR yes 70397066
chr6 87881119 87881131 FOXC2 JASPAR yes 103303713
chr6 87881121 87881132 FOXA1 JASPAR yes 70397067
chr6 87881121 87881132 FOXA1 JASPAR yes 103303714
chr6 87881122 87881137 FOXP1 JASPAR yes 70397068
chr6 87881122 87881137 FOXP1 JASPAR yes 103303715
chr6 87881123 87881134 FOXP2 JASPAR yes 70397069
chr6 87881123 87881134 FOXP2 JASPAR yes 103303716
chr6 87881123 87881135 FOXC2 JASPAR yes 70397070
chr6 87881123 87881135 FOXC2 JASPAR yes 103303717
chr6 87881124 87881135 FOXC1 JASPAR yes 70397071
chr6 87881124 87881135 FOXC1 JASPAR yes 103303718
chr6 87881198 87881213 FOXA1 JASPAR yes 70397072
chr6 87881198 87881213 FOXA1 JASPAR yes 103303719
chr6 87881200 87881218 MAFF JASPAR yes 70397073
chr6 87881200 87881218 MAFF JASPAR yes 103303720
chr6 87881202 87881213 FOXA1 JASPAR yes 70397074
chr6 87881202 87881213 FOXA1 JASPAR yes 103303721
chr6 87881202 87881217 MAFK JASPAR yes 70397075
chr6 87881202 87881217 MAFK JASPAR yes 103303722
chr6 87881215 87881221 TCF4 TRANSFAC yes 70397076
chr6 87881215 87881221 TCF4 TRANSFAC yes 103303723
chr6 87881239 87881255 SOX4 JASPAR yes 70397077
chr6 87881239 87881255 SOX4 JASPAR yes 103303724
chr6 87881251 87881263 HNF1B JASPAR yes 70397078
chr6 87881251 87881263 HNF1B JASPAR yes 103303725
chr6 87881255 87881267 MEF2A JASPAR yes 70397079
chr6 87881255 87881267 MEF2B JASPAR yes 70397080
chr6 87881255 87881267 MEF2D JASPAR yes 70397081
chr6 87881255 87881267 MEF2A JASPAR yes 103303726
chr6 87881255 87881267 MEF2B JASPAR yes 103303727
chr6 87881255 87881267 MEF2D JASPAR yes 103303728
chr6 87881294 87881305 HOXC13 JASPAR yes 70397082
chr6 87881294 87881305 HOXD12 JASPAR yes 70397083
chr6 87881294 87881305 HOXC13 JASPAR yes 103303729
chr6 87881294 87881305 HOXD12 JASPAR yes 103303730
chr6 87881295 87881304 CDX1 JASPAR yes 70397084
chr6 87881295 87881304 CDX1 JASPAR yes 103303731
chr6 87881295 87881305 HOXA13 JASPAR yes 70397085
chr6 87881295 87881305 HOXB13 JASPAR yes 70397086
chr6 87881295 87881305 HOXC10 JASPAR yes 70397087
chr6 87881295 87881305 HOXD11 JASPAR yes 70397088
chr6 87881295 87881305 HOXD13 JASPAR yes 70397089
chr6 87881295 87881305 HOXA13 JASPAR yes 103303732
chr6 87881295 87881305 HOXB13 JASPAR yes 103303733
chr6 87881295 87881305 HOXC10 JASPAR yes 103303734
chr6 87881295 87881305 HOXD11 JASPAR yes 103303735
chr6 87881295 87881305 HOXD13 JASPAR yes 103303736
chr6 87881304 87881307 MYB TRANSFAC yes 70397090
chr6 87881304 87881307 MYB TRANSFAC yes 103303737
chr6 87881307 87881311 YY1 TRANSFAC yes 70397091
chr6 87881307 87881311 YY1 TRANSFAC yes 103303738
chr6 87881324 87881328 YY1 TRANSFAC yes 70397092
chr6 87881324 87881328 YY1 TRANSFAC yes 103303739
chr6 87881326 87881337 FOXH1 JASPAR yes 70397093
chr6 87881326 87881337 FOXH1 JASPAR yes 103303740
chr6 87881327 87881335 RHOXF1 JASPAR yes 70397094
chr6 87881327 87881335 RHOXF1 JASPAR yes 103303741
chr6 87881330 87881336 ZNF354C JASPAR yes 70397095
chr6 87881330 87881336 ZNF354C JASPAR yes 103303742
chr6 87881369 87881380 FOXB1 JASPAR yes 70397096
chr6 87881369 87881380 FOXB1 JASPAR yes 103303743
chr6 87881372 87881386 RORA JASPAR yes 70397097
chr6 87881372 87881386 RORA JASPAR yes 103303744
chr6 87881403 87881409 TCF1 TRANSFAC yes 70397098
chr6 87881403 87881409 TCF1 TRANSFAC yes 103303745
chr6 87881415 87881423 FOXL1 JASPAR yes 70397099
chr6 87881415 87881423 FOXL1 JASPAR yes 103303746
chr6 87881419 87881423 YY1 TRANSFAC yes 70397100
chr6 87881419 87881423 YY1 TRANSFAC yes 103303747
chr6 87881430 87881436 YY1 JASPAR yes 70397101
chr6 87881430 87881436 YY1 JASPAR yes 103303748
chr6 87881432 87881444 BHLHE23 JASPAR yes 70397102
chr6 87881432 87881444 PKNOX1 JASPAR yes 70397103
chr6 87881432 87881444 PKNOX2 JASPAR yes 70397104
chr6 87881432 87881444 TGIF1 JASPAR yes 70397105
chr6 87881432 87881444 TGIF2 JASPAR yes 70397106
chr6 87881432 87881444 BHLHE23 JASPAR yes 103303749
chr6 87881432 87881444 PKNOX1 JASPAR yes 103303750
chr6 87881432 87881444 PKNOX2 JASPAR yes 103303751
chr6 87881432 87881444 TGIF1 JASPAR yes 103303752
chr6 87881432 87881444 TGIF2 JASPAR yes 103303753
chr6 87881433 87881443 BHLHE22 JASPAR yes 70397107
chr6 87881433 87881443 NEUROD2 JASPAR yes 70397108
chr6 87881433 87881443 NEUROG2 JASPAR yes 70397109
chr6 87881433 87881443 OLIG1 JASPAR yes 70397110
chr6 87881433 87881443 OLIG2 JASPAR yes 70397111
chr6 87881433 87881443 OLIG3 JASPAR yes 70397112
chr6 87881433 87881443 BHLHE22 JASPAR yes 103303754
chr6 87881433 87881443 NEUROD2 JASPAR yes 103303755
chr6 87881433 87881443 NEUROG2 JASPAR yes 103303756
chr6 87881433 87881443 OLIG1 JASPAR yes 103303757
chr6 87881433 87881443 OLIG2 JASPAR yes 103303758
chr6 87881433 87881443 OLIG3 JASPAR yes 103303759
chr6 87881438 87881453 ESR2 JASPAR yes 70397113
chr6 87881438 87881453 ESR2 JASPAR yes 103303760
chr6 87881450 87881460 HMBOX1 JASPAR yes 70397114
chr6 87881450 87881460 HMBOX1 JASPAR yes 103303761
chr6 87881451 87881459 LBX1 JASPAR yes 70397115
chr6 87881451 87881459 LBX1 JASPAR yes 103303762
chr6 87881456 87881459 MYB TRANSFAC yes 70397116
chr6 87881456 87881459 MYB TRANSFAC yes 103303763
chr6 87881456 87881472 SOX4 JASPAR yes 70397117
chr6 87881456 87881472 SOX4 JASPAR yes 103303764
chr6 87881459 87881463 YY1 TRANSFAC yes 70397118
chr6 87881459 87881463 YY1 TRANSFAC yes 103303765
chr6 87881504 87881516 GRHL1 JASPAR yes 70397119
chr6 87881504 87881516 GRHL1 JASPAR yes 103303766
chr6 87881516 87881531 SOX21 JASPAR yes 70397120
chr6 87881516 87881531 SOX21 JASPAR yes 103303767
chr6 87881517 87881532 PRDM1 JASPAR yes 70397121
chr6 87881517 87881532 PRDM1 JASPAR yes 103303768
chr6 87881526 87881539 SMAD2 JASPAR yes 70397122
chr6 87881526 87881539 SMAD2 JASPAR yes 103303769
chr6 87881541 87881552 HOXC13 JASPAR yes 70397123
chr6 87881541 87881552 HOXC13 JASPAR yes 103303770
chr6 87881559 87881572 SMAD2 JASPAR yes 70397124
chr6 87881559 87881572 SMAD2 JASPAR yes 103303771
SNP sites on vista52689[chr6:87881047-87881581]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 87881113 rs146217227 T G
FOXC2 IRF1 IRF9 RREB1 STAT2
9174046
chr6 87881135 rs186574056 A C
FOXC1 FOXC2 FOXP1
9174047
chr6 87881267 rs2025630 T A
MEF2A MEF2B MEF2D
9174048
chr6 87881494 rs9344687 T A no 9174049
chr6 87881538 rs144098284 A G
SMAD2
9174050
Genes possibly regulated by vista52689[chr6:87881047-87881581]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 87795216 87804824 - CGA ENSG00000135346.4 87804824 1.0 0.99 6781 23777
chr6 87862551 87973914 + ZNF292 ENSG00000188994.8 87862551 0.73 0.99 6782 81504
Expression level of Genes
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miRNAs possibly regulated by vista52689[chr6:87881047-87881581]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results