EnhancerDB
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  3. vista52690[chr6:87897430-87897787]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52690[chr6:87897430-87897787]
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Tissue distribution of vista52690
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Transcription factor that possibly regulate vista52690[chr6:87897430-87897787]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 87897430 87897445 FOXP1 JASPAR yes 70397125
chr6 87897431 87897446 FOXP1 JASPAR yes 70397126
chr6 87897431 87897452 IRF1 JASPAR yes 70397127
chr6 87897432 87897447 FOXP1 JASPAR yes 70397128
chr6 87897432 87897453 IRF1 JASPAR yes 70397129
chr6 87897433 87897448 FOXP1 JASPAR yes 70397130
chr6 87897433 87897454 IRF1 JASPAR yes 70397131
chr6 87897434 87897449 FOXP1 JASPAR yes 70397132
chr6 87897434 87897455 IRF1 JASPAR yes 70397133
chr6 87897435 87897450 FOXP1 JASPAR yes 70397134
chr6 87897436 87897451 FOXP1 JASPAR yes 70397135
chr6 87897437 87897452 FOXP1 JASPAR yes 70397136
chr6 87897437 87897458 IRF1 JASPAR yes 70397137
chr6 87897438 87897453 FOXP1 JASPAR yes 70397138
chr6 87897441 87897456 PRDM1 JASPAR yes 70397139
chr6 87897441 87897456 STAT2 JASPAR yes 70397140
chr6 87897458 87897462 YY1 TRANSFAC yes 70397141
chr6 87897461 87897476 FOXA1 JASPAR yes 70397142
chr6 87897463 87897475 FOXC2 JASPAR yes 70397143
chr6 87897464 87897475 FOXB1 JASPAR yes 70397144
chr6 87897464 87897475 FOXC1 JASPAR yes 70397145
chr6 87897465 87897476 FOXA1 JASPAR yes 70397146
chr6 87897502 87897517 FOXP1 JASPAR yes 70397147
chr6 87897503 87897514 FOXP2 JASPAR yes 70397148
chr6 87897504 87897512 FOXD1 JASPAR yes 70397149
chr6 87897504 87897512 FOXG1 JASPAR yes 70397150
chr6 87897504 87897512 FOXO3 JASPAR yes 70397151
chr6 87897505 87897512 FOXD2 JASPAR yes 70397152
chr6 87897505 87897512 FOXI1 JASPAR yes 70397153
chr6 87897505 87897512 FOXL1 JASPAR yes 70397154
chr6 87897505 87897512 FOXO4 JASPAR yes 70397155
chr6 87897505 87897512 FOXO6 JASPAR yes 70397156
chr6 87897505 87897512 FOXP3 JASPAR yes 70397157
chr6 87897505 87897516 HOXC12 JASPAR yes 70397158
chr6 87897512 87897520 FOXC1 JASPAR yes 70397159
chr6 87897537 87897550 ATF4 JASPAR yes 70397160
chr6 87897538 87897549 CEBPA JASPAR yes 70397161
chr6 87897545 87897549 YY1 TRANSFAC yes 70397162
chr6 87897559 87897571 INSM1 JASPAR yes 70397163
chr6 87897568 87897580 POU3F1 JASPAR yes 70397164
chr6 87897568 87897580 POU3F2 JASPAR yes 70397165
chr6 87897568 87897581 POU2F2 JASPAR yes 70397166
chr6 87897569 87897578 POU5F1B JASPAR yes 70397167
chr6 87897571 87897586 HNF1A JASPAR yes 70397168
chr6 87897572 87897585 HNF1B JASPAR yes 70397169
chr6 87897575 87897585 HOXC10 JASPAR yes 70397170
chr6 87897575 87897586 HOXC11 JASPAR yes 70397171
chr6 87897576 87897586 EMX1 JASPAR yes 70397172
chr6 87897576 87897586 HOXB3 JASPAR yes 70397173
chr6 87897576 87897586 MEOX2 JASPAR yes 70397174
chr6 87897577 87897585 NKX6-1 JASPAR yes 70397175
chr6 87897587 87897592 GATA2 JASPAR yes 70397176
chr6 87897587 87897602 PRDM1 JASPAR yes 70397177
chr6 87897604 87897609 TFAP2A TRANSFAC yes 70397178
chr6 87897604 87897610 MZF1 JASPAR yes 70397179
chr6 87897646 87897650 NFE TRANSFAC yes 70397180
chr6 87897646 87897651 GATA1 TRANSFAC yes 70397181
chr6 87897646 87897652 GATA3 JASPAR yes 70397182
chr6 87897662 87897672 NEUROD2 JASPAR yes 70397183
chr6 87897662 87897672 OLIG2 JASPAR yes 70397184
chr6 87897662 87897672 OLIG3 JASPAR yes 70397185
chr6 87897680 87897695 FOXA1 JASPAR yes 70397186
chr6 87897682 87897700 MAFF JASPAR yes 70397187
chr6 87897684 87897695 FOXA1 JASPAR yes 70397188
chr6 87897684 87897699 MAFK JASPAR yes 70397189
chr6 87897693 87897708 LEF1 JASPAR yes 70397190
chr6 87897695 87897709 ONECUT2 JASPAR yes 70397191
chr6 87897695 87897709 ONECUT3 JASPAR yes 70397192
chr6 87897712 87897726 RORA JASPAR yes 70397193
chr6 87897720 87897724 H4TF2 TRANSFAC yes 70397194
chr6 87897724 87897729 MYC TRANSFAC yes 70397195
chr6 87897747 87897758 CEBPA JASPAR yes 70397196
chr6 87897748 87897759 CEBPB JASPAR yes 70397197
chr6 87897759 87897765 NFIC JASPAR yes 70397198
chr6 87897761 87897771 GBX2 JASPAR yes 70397199
chr6 87897761 87897771 MNX1 JASPAR yes 70397200
chr6 87897761 87897771 RAX JASPAR yes 70397201
chr6 87897762 87897770 BARX1 JASPAR yes 70397202
chr6 87897762 87897770 BSX JASPAR yes 70397203
chr6 87897762 87897770 ISL2 JASPAR yes 70397204
chr6 87897762 87897770 LMX1B JASPAR yes 70397205
chr6 87897762 87897770 MSX1 JASPAR yes 70397206
chr6 87897762 87897770 MSX2 JASPAR yes 70397207
SNP sites on vista52690[chr6:87897430-87897787]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 87897432 rs10687268 C CAAA
FOXP1 IRF1
9174267
chr6 87897432 rs374882457 C CAA,CAAA,CAAAA
FOXP1 IRF1
9174268
chr6 87897432 rs397964407 C CAAA
FOXP1 IRF1
9174269
chr6 87897569 rs74374393 G C,T
INSM1 POU2F2 POU3F1 POU3F2 POU5F1B
9174270
chr6 87897582 rs142889280 T C
EMX1 HNF1A HNF1B HOXB3 HOXC10 HOXC11 MEOX2 NKX6-1
9174271
chr6 87897588 rs146115245 G A
GATA2 PRDM1
9174272
chr6 87897683 rs139908335 G A
FOXA1 MAFF
9174273
Genes possibly regulated by vista52690[chr6:87897430-87897787]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 87795216 87804824 - CGA ENSG00000135346.4 87804824 1.0 0.99 6781 7394
chr6 87862551 87973914 + ZNF292 ENSG00000188994.8 87862551 0.73 0.99 6782 65121
Expression level of Genes
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miRNAs possibly regulated by vista52690[chr6:87897430-87897787]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results