EnhancerDB
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  3. vista52697[chr6:88408243-88408692]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52697[chr6:88408243-88408692]
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Tissue distribution of vista52697
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Transcription factor that possibly regulate vista52697[chr6:88408243-88408692]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 88408464 88408710 RUNX3 UCSC Txn Factor no Conserved 108540916
chr6 88408232 88408244 TEAD1 JASPAR yes 70397363
chr6 88408232 88408244 TEAD1 JASPAR yes 103322878
chr6 88408258 88408268 OLIG2 JASPAR yes 70397364
chr6 88408258 88408268 OLIG3 JASPAR yes 70397365
chr6 88408258 88408268 OLIG2 JASPAR yes 103322879
chr6 88408258 88408268 OLIG3 JASPAR yes 103322880
chr6 88408272 88408278 SOX10 JASPAR yes 70397366
chr6 88408272 88408278 SOX10 JASPAR yes 103322881
chr6 88408290 88408306 SOX8 JASPAR yes 70397367
chr6 88408290 88408306 SOX8 JASPAR yes 103322882
chr6 88408302 88408306 YY1 TRANSFAC yes 70397368
chr6 88408302 88408306 YY1 TRANSFAC yes 103322883
chr6 88408314 88408334 TBX19 JASPAR yes 70397369
chr6 88408314 88408334 TBX19 JASPAR yes 103322884
chr6 88408316 88408319 MYB TRANSFAC yes 70397370
chr6 88408316 88408319 MYB TRANSFAC yes 103322885
chr6 88408316 88408332 T JASPAR yes 70397371
chr6 88408316 88408332 T JASPAR yes 103322886
chr6 88408316 88408333 RARA JASPAR yes 70397372
chr6 88408316 88408333 RARA JASPAR yes 103322887
chr6 88408317 88408326 NKX3-2 JASPAR yes 70397373
chr6 88408317 88408326 NKX3-2 JASPAR yes 103322888
chr6 88408332 88408338 TBP TRANSFAC yes 70397374
chr6 88408332 88408338 TBP TRANSFAC yes 103322889
chr6 88408334 88408354 TP53 JASPAR yes 70397375
chr6 88408334 88408354 TP53 JASPAR yes 103322890
chr6 88408335 88408347 GRHL1 JASPAR yes 70397376
chr6 88408335 88408347 GRHL1 JASPAR yes 103322891
chr6 88408347 88408352 GATA2 JASPAR yes 70397377
chr6 88408347 88408352 GATA2 JASPAR yes 103322892
chr6 88408368 88408384 POU4F3 JASPAR yes 70397378
chr6 88408368 88408384 POU4F3 JASPAR yes 103322893
chr6 88408370 88408384 POU4F1 JASPAR yes 70397379
chr6 88408370 88408384 POU4F1 JASPAR yes 103322894
chr6 88408372 88408378 TBP TRANSFAC yes 70397380
chr6 88408372 88408378 TBP TRANSFAC yes 103322895
chr6 88408382 88408396 POU1F1 JASPAR yes 70397381
chr6 88408382 88408396 POU1F1 JASPAR yes 103322896
chr6 88408386 88408392 NFIC JASPAR yes 70397382
chr6 88408386 88408392 NFIC JASPAR yes 103322897
chr6 88408387 88408397 EMX2 JASPAR yes 70397383
chr6 88408387 88408397 EN2 JASPAR yes 70397384
chr6 88408387 88408397 ESX1 JASPAR yes 70397385
chr6 88408387 88408397 EVX1 JASPAR yes 70397386
chr6 88408387 88408397 EVX2 JASPAR yes 70397387
chr6 88408387 88408397 GBX1 JASPAR yes 70397388
chr6 88408387 88408397 GBX2 JASPAR yes 70397389
chr6 88408387 88408397 HESX1 JASPAR yes 70397390
chr6 88408387 88408397 HOXA2 JASPAR yes 70397391
chr6 88408387 88408397 HOXB3 JASPAR yes 70397392
chr6 88408387 88408397 LBX2 JASPAR yes 70397393
chr6 88408387 88408397 LHX2 JASPAR yes 70397394
chr6 88408387 88408397 MIXL1 JASPAR yes 70397395
chr6 88408387 88408397 RAX JASPAR yes 70397396
chr6 88408387 88408397 EMX2 JASPAR yes 103322898
chr6 88408387 88408397 EN2 JASPAR yes 103322899
chr6 88408387 88408397 ESX1 JASPAR yes 103322900
chr6 88408387 88408397 EVX1 JASPAR yes 103322901
chr6 88408387 88408397 EVX2 JASPAR yes 103322902
chr6 88408387 88408397 GBX1 JASPAR yes 103322903
chr6 88408387 88408397 GBX2 JASPAR yes 103322904
chr6 88408387 88408397 HESX1 JASPAR yes 103322905
chr6 88408387 88408397 HOXA2 JASPAR yes 103322906
chr6 88408387 88408397 HOXB3 JASPAR yes 103322907
chr6 88408387 88408397 LBX2 JASPAR yes 103322908
chr6 88408387 88408397 LHX2 JASPAR yes 103322909
chr6 88408387 88408397 MIXL1 JASPAR yes 103322910
chr6 88408387 88408397 RAX JASPAR yes 103322911
chr6 88408388 88408392 H1TF2 TRANSFAC yes 70397397
chr6 88408388 88408392 NFE TRANSFAC yes 70397398
chr6 88408388 88408392 SRF TRANSFAC yes 70397399
chr6 88408388 88408392 H1TF2 TRANSFAC yes 103322912
chr6 88408388 88408392 NFE TRANSFAC yes 103322913
chr6 88408388 88408392 SRF TRANSFAC yes 103322914
chr6 88408388 88408396 BARX1 JASPAR yes 70397400
chr6 88408388 88408396 BSX JASPAR yes 70397401
chr6 88408388 88408396 EN1 JASPAR yes 70397402
chr6 88408388 88408396 ISX JASPAR yes 70397403
chr6 88408388 88408396 LHX9 JASPAR yes 70397404
chr6 88408388 88408396 MSX1 JASPAR yes 70397405
chr6 88408388 88408396 MSX2 JASPAR yes 70397406
chr6 88408388 88408396 PRRX1 JASPAR yes 70397407
chr6 88408388 88408396 RAX2 JASPAR yes 70397408
chr6 88408388 88408396 SHOX JASPAR yes 70397409
chr6 88408388 88408396 BARX1 JASPAR yes 103322915
chr6 88408388 88408396 BSX JASPAR yes 103322916
chr6 88408388 88408396 EN1 JASPAR yes 103322917
chr6 88408388 88408396 ISX JASPAR yes 103322918
chr6 88408388 88408396 LHX9 JASPAR yes 103322919
chr6 88408388 88408396 MSX1 JASPAR yes 103322920
chr6 88408388 88408396 MSX2 JASPAR yes 103322921
chr6 88408388 88408396 PRRX1 JASPAR yes 103322922
chr6 88408388 88408396 RAX2 JASPAR yes 103322923
chr6 88408388 88408396 SHOX JASPAR yes 103322924
chr6 88408388 88408402 POU1F1 JASPAR yes 70397410
chr6 88408388 88408402 POU1F1 JASPAR yes 103322925
chr6 88408389 88408401 POU3F1 JASPAR yes 70397411
chr6 88408389 88408401 POU3F2 JASPAR yes 70397412
chr6 88408389 88408401 POU3F1 JASPAR yes 103322926
chr6 88408389 88408401 POU3F2 JASPAR yes 103322927
chr6 88408389 88408402 POU3F3 JASPAR yes 70397413
chr6 88408389 88408402 POU3F3 JASPAR yes 103322928
chr6 88408390 88408402 POU2F1 JASPAR yes 70397414
chr6 88408390 88408402 POU2F1 JASPAR yes 103322929
chr6 88408391 88408400 POU3F4 JASPAR yes 70397415
chr6 88408391 88408400 POU5F1B JASPAR yes 70397416
chr6 88408391 88408400 POU3F4 JASPAR yes 103322930
chr6 88408391 88408400 POU5F1B JASPAR yes 103322931
chr6 88408393 88408409 POU4F2 JASPAR yes 70397417
chr6 88408393 88408409 POU4F2 JASPAR yes 103322932
chr6 88408415 88408425 RUNX3 JASPAR yes 70397418
chr6 88408415 88408425 RUNX3 JASPAR yes 103322933
chr6 88408416 88408425 RUNX2 JASPAR yes 70397419
chr6 88408416 88408425 RUNX2 JASPAR yes 103322934
chr6 88408437 88408440 MYB TRANSFAC yes 70397420
chr6 88408437 88408440 MYB TRANSFAC yes 103322935
chr6 88408437 88408447 HINFP JASPAR yes 70397421
chr6 88408437 88408447 HINFP JASPAR yes 103322936
chr6 88408437 88408450 ELF3 JASPAR yes 70397422
chr6 88408437 88408450 ELF3 JASPAR yes 103322937
chr6 88408438 88408448 ELK3 JASPAR yes 70397423
chr6 88408438 88408448 ELK3 JASPAR yes 103322938
chr6 88408440 88408446 ETS1 JASPAR yes 70397424
chr6 88408440 88408446 SPI1 JASPAR yes 70397425
chr6 88408440 88408446 ETS1 JASPAR yes 103322939
chr6 88408440 88408446 SPI1 JASPAR yes 103322940
chr6 88408445 88408455 SREBF2 JASPAR yes 70397426
chr6 88408445 88408455 SREBF2 JASPAR yes 103322941
chr6 88408459 88408473 SPI1 JASPAR yes 70397427
chr6 88408459 88408473 SPIC JASPAR yes 70397428
chr6 88408459 88408473 SPI1 JASPAR yes 103322942
chr6 88408459 88408473 SPIC JASPAR yes 103322943
chr6 88408460 88408468 EHF JASPAR yes 70397429
chr6 88408460 88408468 EHF JASPAR yes 103322944
chr6 88408462 88408467 ETS2 TRANSFAC yes 70397430
chr6 88408462 88408467 ETS2 TRANSFAC yes 103322945
chr6 88408496 88408512 POU4F2 JASPAR yes 70397431
chr6 88408496 88408512 POU4F2 JASPAR yes 103322946
chr6 88408499 88408511 POU2F1 JASPAR yes 70397432
chr6 88408499 88408511 POU2F1 JASPAR yes 103322947
chr6 88408499 88408512 POU3F3 JASPAR yes 70397433
chr6 88408499 88408512 POU3F3 JASPAR yes 103322948
chr6 88408499 88408513 POU1F1 JASPAR yes 70397434
chr6 88408499 88408513 POU1F1 JASPAR yes 103322949
chr6 88408500 88408511 FOXB1 JASPAR yes 70397435
chr6 88408500 88408511 FOXB1 JASPAR yes 103322950
chr6 88408500 88408512 POU3F1 JASPAR yes 70397436
chr6 88408500 88408512 POU3F1 JASPAR yes 103322951
chr6 88408501 88408505 YY1 TRANSFAC yes 70397437
chr6 88408501 88408505 YY1 TRANSFAC yes 103322952
chr6 88408501 88408510 POU5F1B JASPAR yes 70397438
chr6 88408501 88408510 POU5F1B JASPAR yes 103322953
chr6 88408501 88408512 FOXB1 JASPAR yes 70397439
chr6 88408501 88408512 FOXB1 JASPAR yes 103322954
chr6 88408501 88408513 POU2F1 JASPAR yes 70397440
chr6 88408501 88408513 POU2F1 JASPAR yes 103322955
chr6 88408502 88408511 POU5F1B JASPAR yes 70397441
chr6 88408502 88408511 POU5F1B JASPAR yes 103322956
chr6 88408526 88408536 ETV6 JASPAR yes 70397442
chr6 88408526 88408536 ETV6 JASPAR yes 103322957
chr6 88408526 88408537 ELF5 JASPAR yes 70397443
chr6 88408526 88408537 ELF5 JASPAR yes 103322958
chr6 88408526 88408538 EHF JASPAR yes 70397444
chr6 88408526 88408538 ELF1 JASPAR yes 70397445
chr6 88408526 88408538 ELF4 JASPAR yes 70397446
chr6 88408526 88408538 EHF JASPAR yes 103322959
chr6 88408526 88408538 ELF1 JASPAR yes 103322960
chr6 88408526 88408538 ELF4 JASPAR yes 103322961
chr6 88408526 88408539 ELF1 JASPAR yes 70397447
chr6 88408526 88408539 ELF1 JASPAR yes 103322962
chr6 88408527 88408534 SPI1 JASPAR yes 70397448
chr6 88408527 88408534 SPI1 JASPAR yes 103322963
chr6 88408527 88408535 EHF JASPAR yes 70397449
chr6 88408527 88408535 FEV JASPAR yes 70397450
chr6 88408527 88408535 EHF JASPAR yes 103322964
chr6 88408527 88408535 FEV JASPAR yes 103322965
chr6 88408534 88408545 BATF JASPAR yes 70397451
chr6 88408534 88408545 BATF JASPAR yes 103322966
chr6 88408585 88408596 CDX2 JASPAR yes 70397452
chr6 88408585 88408596 CDX2 JASPAR yes 103322967
chr6 88408587 88408597 HOXA13 JASPAR yes 70397453
chr6 88408587 88408597 HOXA13 JASPAR yes 103322968
chr6 88408592 88408607 RUNX2 JASPAR yes 70397454
chr6 88408592 88408607 RUNX2 JASPAR yes 103322969
chr6 88408601 88408615 BATF3 JASPAR yes 70397455
chr6 88408601 88408615 BATF3 JASPAR yes 103322970
chr6 88408617 88408623 YY1 JASPAR yes 70397456
chr6 88408617 88408623 YY1 JASPAR yes 103322971
chr6 88408619 88408640 IRF1 JASPAR yes 70397457
chr6 88408619 88408640 IRF1 JASPAR yes 103322972
chr6 88408621 88408636 IRF9 JASPAR yes 70397458
chr6 88408621 88408636 IRF9 JASPAR yes 103322973
chr6 88408622 88408636 IRF7 JASPAR yes 70397459
chr6 88408622 88408636 IRF8 JASPAR yes 70397460
chr6 88408622 88408636 IRF7 JASPAR yes 103322974
chr6 88408622 88408636 IRF8 JASPAR yes 103322975
chr6 88408623 88408637 STAT1 JASPAR yes 70397461
chr6 88408623 88408637 STAT1 JASPAR yes 103322976
chr6 88408623 88408638 STAT2 JASPAR yes 70397462
chr6 88408623 88408638 STAT2 JASPAR yes 103322977
chr6 88408624 88408636 IRF1 JASPAR yes 70397463
chr6 88408624 88408636 IRF1 JASPAR yes 103322978
chr6 88408634 88408639 GATA1 TRANSFAC yes 70397464
chr6 88408634 88408639 GATA1 TRANSFAC yes 103322979
chr6 88408646 88408655 SOX9 JASPAR yes 70397465
chr6 88408646 88408655 SOX9 JASPAR yes 103322980
SNP sites on vista52697[chr6:88408243-88408692]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 88408298 rs77513920 A G
SOX8
9175823
chr6 88408354 rs539437830 CTGTG C
TP53
9175824
chr6 88408484 rs566268692 T A
RUNX3
9175825
chr6 88408560 rs3763176 T C
RUNX3
9175826
chr6 88408635 rs182696521 G A
GATA1 IRF1 IRF7 IRF8 IRF9 RUNX3 STAT1 STAT2
9175827
chr6 88408677 rs558249228 T C
RUNX3
9175828
Genes possibly regulated by vista52697[chr6:88408243-88408692]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 88384790 88411927 - AKIRIN2 ENSG00000135334.8 88411927 0.69 1.0 6793 96765
Expression level of Genes
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miRNAs possibly regulated by vista52697[chr6:88408243-88408692]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results