EnhancerDB
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  3. vista52709[chr6:88628138-88628524]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52709[chr6:88628138-88628524]
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Tissue distribution of vista52709
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Transcription factor that possibly regulate vista52709[chr6:88628138-88628524]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 88628145 88628154 VENTX JASPAR yes 70398061
chr6 88628145 88628154 VENTX JASPAR yes 103344222
chr6 88628159 88628173 GATA2 JASPAR yes 70398062
chr6 88628159 88628173 GATA2 JASPAR yes 103344223
chr6 88628163 88628171 GATA3 JASPAR yes 70398063
chr6 88628163 88628171 GATA3 JASPAR yes 103344224
chr6 88628174 88628177 MYB TRANSFAC yes 70398064
chr6 88628174 88628177 MYB TRANSFAC yes 103344225
chr6 88628184 88628197 POU3F3 JASPAR yes 70398065
chr6 88628184 88628197 POU3F3 JASPAR yes 103344226
chr6 88628184 88628198 POU1F1 JASPAR yes 70398066
chr6 88628184 88628198 POU1F1 JASPAR yes 103344227
chr6 88628185 88628197 POU3F2 JASPAR yes 70398067
chr6 88628185 88628197 POU3F2 JASPAR yes 103344228
chr6 88628188 88628198 MEF2A JASPAR yes 70398068
chr6 88628188 88628198 MEF2A JASPAR yes 103344229
chr6 88628197 88628202 SP1 TRANSFAC yes 70398069
chr6 88628197 88628202 SP1 TRANSFAC yes 103344230
chr6 88628202 88628215 SCRT2 JASPAR yes 70398070
chr6 88628202 88628215 SCRT2 JASPAR yes 103344231
chr6 88628206 88628227 IRF1 JASPAR yes 70398071
chr6 88628206 88628227 IRF1 JASPAR yes 103344232
chr6 88628208 88628223 STAT2 JASPAR yes 70398072
chr6 88628208 88628223 STAT2 JASPAR yes 103344233
chr6 88628210 88628222 IRF1 JASPAR yes 70398073
chr6 88628210 88628222 IRF1 JASPAR yes 103344234
chr6 88628210 88628224 IRF7 JASPAR yes 70398074
chr6 88628210 88628224 IRF7 JASPAR yes 103344235
chr6 88628210 88628225 IRF9 JASPAR yes 70398075
chr6 88628210 88628225 IRF9 JASPAR yes 103344236
chr6 88628211 88628226 MEF2A JASPAR yes 70398076
chr6 88628211 88628226 MEF2A JASPAR yes 103344237
chr6 88628212 88628227 MEF2C JASPAR yes 70398077
chr6 88628212 88628227 MEF2C JASPAR yes 103344238
chr6 88628215 88628219 YY1 TRANSFAC yes 70398078
chr6 88628215 88628219 YY1 TRANSFAC yes 103344239
chr6 88628218 88628229 NFIL3 JASPAR yes 70398079
chr6 88628218 88628229 NFIL3 JASPAR yes 103344240
chr6 88628226 88628230 YY1 TRANSFAC yes 70398080
chr6 88628226 88628230 YY1 TRANSFAC yes 103344241
chr6 88628229 88628243 RORA JASPAR yes 70398081
chr6 88628229 88628243 RORA JASPAR yes 103344242
chr6 88628232 88628244 FOXI1 JASPAR yes 70398082
chr6 88628232 88628244 FOXI1 JASPAR yes 103344243
chr6 88628234 88628244 MEF2A JASPAR yes 70398083
chr6 88628234 88628244 MEF2A JASPAR yes 103344244
chr6 88628246 88628259 ZBTB18 JASPAR yes 70398084
chr6 88628246 88628259 ZBTB18 JASPAR yes 103344245
chr6 88628259 88628265 NFIC JASPAR yes 70398085
chr6 88628259 88628265 NFIC JASPAR yes 103344246
chr6 88628261 88628265 H1TF2 TRANSFAC yes 70398086
chr6 88628261 88628265 NFE TRANSFAC yes 70398087
chr6 88628261 88628265 SRF TRANSFAC yes 70398088
chr6 88628261 88628265 H1TF2 TRANSFAC yes 103344247
chr6 88628261 88628265 NFE TRANSFAC yes 103344248
chr6 88628261 88628265 SRF TRANSFAC yes 103344249
chr6 88628264 88628274 TFEB JASPAR yes 70398089
chr6 88628264 88628274 TFEC JASPAR yes 70398090
chr6 88628264 88628274 TFEB JASPAR yes 103344250
chr6 88628264 88628274 TFEC JASPAR yes 103344251
chr6 88628264 88628275 USF1 JASPAR yes 70398091
chr6 88628264 88628275 USF1 JASPAR yes 103344252
chr6 88628269 88628278 JDP2 JASPAR yes 70398092
chr6 88628269 88628278 JDP2 JASPAR yes 103344253
chr6 88628275 88628286 GCM1 JASPAR yes 70398093
chr6 88628275 88628286 GCM1 JASPAR yes 103344254
chr6 88628277 88628286 HIC2 JASPAR yes 70398094
chr6 88628277 88628286 HIC2 JASPAR yes 103344255
chr6 88628280 88628284 LFA1 TRANSFAC yes 70398095
chr6 88628280 88628284 LFA1 TRANSFAC yes 103344256
chr6 88628304 88628316 BHLHE23 JASPAR yes 70398096
chr6 88628304 88628316 BHLHE23 JASPAR yes 103344257
chr6 88628305 88628315 BHLHE22 JASPAR yes 70398097
chr6 88628305 88628315 OLIG1 JASPAR yes 70398098
chr6 88628305 88628315 OLIG2 JASPAR yes 70398099
chr6 88628305 88628315 OLIG3 JASPAR yes 70398100
chr6 88628305 88628315 BHLHE22 JASPAR yes 103344258
chr6 88628305 88628315 OLIG1 JASPAR yes 103344259
chr6 88628305 88628315 OLIG2 JASPAR yes 103344260
chr6 88628305 88628315 OLIG3 JASPAR yes 103344261
chr6 88628307 88628318 NRL JASPAR yes 70398101
chr6 88628307 88628318 NRL JASPAR yes 103344262
chr6 88628311 88628325 BATF3 JASPAR yes 70398102
chr6 88628311 88628325 BATF3 JASPAR yes 103344263
chr6 88628320 88628324 YY1 TRANSFAC yes 70398103
chr6 88628320 88628324 YY1 TRANSFAC yes 103344264
chr6 88628331 88628341 ID4 JASPAR yes 70398104
chr6 88628331 88628341 TCF3 JASPAR yes 70398105
chr6 88628331 88628341 TCF4 JASPAR yes 70398106
chr6 88628331 88628341 ID4 JASPAR yes 103344265
chr6 88628331 88628341 TCF3 JASPAR yes 103344266
chr6 88628331 88628341 TCF4 JASPAR yes 103344267
chr6 88628332 88628341 SNAI2 JASPAR yes 70398107
chr6 88628332 88628341 SNAI2 JASPAR yes 103344268
chr6 88628333 88628338 USF2 TRANSFAC yes 70398108
chr6 88628333 88628338 USF2 TRANSFAC yes 103344269
chr6 88628345 88628366 IRF1 JASPAR yes 70398109
chr6 88628345 88628366 IRF1 JASPAR yes 103344270
chr6 88628349 88628363 IRF7 JASPAR yes 70398110
chr6 88628349 88628363 IRF7 JASPAR yes 103344271
chr6 88628349 88628364 IRF9 JASPAR yes 70398111
chr6 88628349 88628364 IRF9 JASPAR yes 103344272
chr6 88628408 88628411 MYB TRANSFAC yes 70398112
chr6 88628408 88628411 MYB TRANSFAC yes 103344273
chr6 88628410 88628419 NKX3-2 JASPAR yes 70398113
chr6 88628410 88628419 NKX3-2 JASPAR yes 103344274
chr6 88628420 88628433 ZBTB18 JASPAR yes 70398114
chr6 88628420 88628433 ZBTB18 JASPAR yes 103344275
chr6 88628449 88628460 FOXH1 JASPAR yes 70398115
chr6 88628449 88628460 FOXH1 JASPAR yes 103344276
chr6 88628453 88628459 ZNF354C JASPAR yes 70398116
chr6 88628453 88628459 ZNF354C JASPAR yes 103344277
chr6 88628458 88628462 YY1 TRANSFAC yes 70398117
chr6 88628458 88628462 YY1 TRANSFAC yes 103344278
chr6 88628463 88628466 MYB TRANSFAC yes 70398118
chr6 88628463 88628466 MYB TRANSFAC yes 103344279
chr6 88628467 88628480 EOMES JASPAR yes 70398119
chr6 88628467 88628480 EOMES JASPAR yes 103344280
chr6 88628469 88628479 TBR1 JASPAR yes 70398120
chr6 88628469 88628479 TBR1 JASPAR yes 103344281
chr6 88628469 88628480 TBX20 JASPAR yes 70398121
chr6 88628469 88628480 TBX2 JASPAR yes 70398122
chr6 88628469 88628480 TBX20 JASPAR yes 103344282
chr6 88628469 88628480 TBX2 JASPAR yes 103344283
chr6 88628470 88628480 TBX21 JASPAR yes 70398123
chr6 88628470 88628480 TBX21 JASPAR yes 103344284
chr6 88628481 88628485 NFE TRANSFAC yes 70398124
chr6 88628481 88628485 NFE TRANSFAC yes 103344285
chr6 88628481 88628486 GATA1 TRANSFAC yes 70398125
chr6 88628481 88628486 GATA1 TRANSFAC yes 103344286
chr6 88628481 88628487 GATA3 JASPAR yes 70398126
chr6 88628481 88628487 GATA3 JASPAR yes 103344287
chr6 88628510 88628520 HMBOX1 JASPAR yes 70398127
chr6 88628510 88628520 HMBOX1 JASPAR yes 103344288
chr6 88628512 88628515 MYB TRANSFAC yes 70398128
chr6 88628512 88628515 MYB TRANSFAC yes 103344289
chr6 88628515 88628519 H1TF2 TRANSFAC yes 70398129
chr6 88628515 88628519 NFE TRANSFAC yes 70398130
chr6 88628515 88628519 SRF TRANSFAC yes 70398131
chr6 88628515 88628519 H1TF2 TRANSFAC yes 103344290
chr6 88628515 88628519 NFE TRANSFAC yes 103344291
chr6 88628515 88628519 SRF TRANSFAC yes 103344292
chr6 88628519 88628534 HNF1A JASPAR yes 70398132
chr6 88628519 88628534 HNF1A JASPAR yes 103344293
chr6 88628520 88628533 HNF1B JASPAR yes 70398133
chr6 88628520 88628533 HNF1B JASPAR yes 103344294
chr6 88628520 88628534 JUN JASPAR yes 70398134
chr6 88628520 88628534 JUN JASPAR yes 103344295
chr6 88628524 88628542 IRF2 JASPAR yes 70398135
chr6 88628524 88628542 IRF2 JASPAR yes 103344296
SNP sites on vista52709[chr6:88628138-88628524]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 88628174 rs74523930 C G
MYB
9177720
chr6 88628435 rs112758846 G A,T no 9177721
chr6 88628511 rs190509124 C G
HMBOX1
9177722
Genes possibly regulated by vista52709[chr6:88628138-88628524]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52709[chr6:88628138-88628524]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results