EnhancerDB
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  3. vista5271[chr1:223901276-223901546]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5271[chr1:223901276-223901546]
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Tissue distribution of vista5271
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Transcription factor that possibly regulate vista5271[chr1:223901276-223901546]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223899892 223901978 POLR2A UCSC Txn Factor no Conserved 107873036
chr1 223901264 223901281 NR3C1 JASPAR yes 35671309
chr1 223901264 223901281 NR3C2 JASPAR yes 35671310
chr1 223901264 223901281 NR3C1 JASPAR yes 118466693
chr1 223901264 223901281 NR3C2 JASPAR yes 118466694
chr1 223901266 223901281 AR JASPAR yes 35671311
chr1 223901266 223901281 AR JASPAR yes 118466695
chr1 223901279 223901285 MZF1 JASPAR yes 35671312
chr1 223901279 223901285 MZF1 JASPAR yes 118466696
chr1 223901282 223901286 H1TF2 TRANSFAC yes 35671313
chr1 223901282 223901286 NFE TRANSFAC yes 35671314
chr1 223901282 223901286 SRF TRANSFAC yes 35671315
chr1 223901282 223901286 H1TF2 TRANSFAC yes 118466697
chr1 223901282 223901286 NFE TRANSFAC yes 118466698
chr1 223901282 223901286 SRF TRANSFAC yes 118466699
chr1 223901297 223901316 RFX2 JASPAR yes 35671316
chr1 223901297 223901316 RFX2 JASPAR yes 118466700
chr1 223901308 223901313 TFAP2A TRANSFAC yes 35671317
chr1 223901308 223901313 TFAP2A TRANSFAC yes 118466701
chr1 223901308 223901314 MZF1 JASPAR yes 35671318
chr1 223901308 223901314 MZF1 JASPAR yes 118466702
chr1 223901308 223901321 NFKB1 JASPAR yes 35671319
chr1 223901308 223901321 NFKB1 JASPAR yes 118466703
chr1 223901309 223901320 NFKB1 JASPAR yes 35671320
chr1 223901309 223901320 NFKB1 JASPAR yes 118466704
chr1 223901313 223901334 ZNF263 JASPAR yes 35671321
chr1 223901313 223901334 ZNF263 JASPAR yes 118466705
chr1 223901314 223901326 TFAP2A JASPAR yes 35671322
chr1 223901314 223901326 TFAP2B JASPAR yes 35671323
chr1 223901314 223901326 TFAP2A JASPAR yes 118466706
chr1 223901314 223901326 TFAP2B JASPAR yes 118466707
chr1 223901314 223901329 TFAP2A JASPAR yes 35671324
chr1 223901314 223901329 TFAP2C JASPAR yes 35671325
chr1 223901314 223901329 TFAP2A JASPAR yes 118466708
chr1 223901314 223901329 TFAP2C JASPAR yes 118466709
chr1 223901315 223901326 TFAP2A JASPAR yes 35671326
chr1 223901315 223901326 TFAP2B JASPAR yes 35671327
chr1 223901315 223901326 TFAP2C JASPAR yes 35671328
chr1 223901315 223901326 TFAP2A JASPAR yes 118466710
chr1 223901315 223901326 TFAP2B JASPAR yes 118466711
chr1 223901315 223901326 TFAP2C JASPAR yes 118466712
chr1 223901324 223901334 SP1 JASPAR yes 35671329
chr1 223901324 223901334 SP1 JASPAR yes 118466713
chr1 223901331 223901342 EBF1 JASPAR yes 35671330
chr1 223901331 223901342 EBF1 JASPAR yes 118466714
chr1 223901341 223901356 TFAP2C JASPAR yes 35671331
chr1 223901341 223901356 TFAP2C JASPAR yes 118466715
chr1 223901342 223901362 TP53 JASPAR yes 35671332
chr1 223901342 223901362 TP53 JASPAR yes 118466716
chr1 223901345 223901351 MZF1 JASPAR yes 35671333
chr1 223901345 223901351 MZF1 JASPAR yes 118466717
chr1 223901353 223901363 MZF1 JASPAR yes 35671334
chr1 223901353 223901363 MZF1 JASPAR yes 118466718
chr1 223901361 223901371 SP1 JASPAR yes 35671335
chr1 223901361 223901371 SP1 JASPAR yes 118466719
chr1 223901365 223901385 ESR1 JASPAR yes 35671336
chr1 223901365 223901385 ESR1 JASPAR yes 118466720
chr1 223901378 223901387 THAP1 JASPAR yes 35671337
chr1 223901378 223901387 THAP1 JASPAR yes 118466721
chr1 223901453 223901464 ESRRA JASPAR yes 35671338
chr1 223901453 223901464 ESRRA JASPAR yes 118466722
chr1 223901457 223901461 ESR1 TRANSFAC yes 35671339
chr1 223901457 223901461 ESR1 TRANSFAC yes 118466723
chr1 223901459 223901476 RARA JASPAR yes 35671340
chr1 223901459 223901476 RXRA JASPAR yes 35671341
chr1 223901459 223901476 RARA JASPAR yes 118466724
chr1 223901459 223901476 RXRA JASPAR yes 118466725
chr1 223901500 223901513 ELF1 JASPAR yes 35671342
chr1 223901500 223901513 ELF1 JASPAR yes 118466726
chr1 223901503 223901514 ELK4 JASPAR yes 35671343
chr1 223901503 223901514 FLI1 JASPAR yes 35671344
chr1 223901503 223901514 ELK4 JASPAR yes 118466727
chr1 223901503 223901514 FLI1 JASPAR yes 118466728
SNP sites on vista5271[chr1:223901276-223901546]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 223901497 rs7414311 A G
POLR2A
978222
chr1 223901545 rs2186006 T C
POLR2A
978223
Genes possibly regulated by vista5271[chr1:223901276-223901546]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223711349 223853436 - CAPN8 ENSG00000203697.7 223853436 0.92 0.99 1874 52160
chr1 223889295 223963720 + CAPN2 ENSG00000162909.13 223889295 0.77 1.0 1875 88019
Expression level of Genes
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miRNAs possibly regulated by vista5271[chr1:223901276-223901546]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results