EnhancerDB
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  3. vista52711[chr6:88635405-88635681]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52711[chr6:88635405-88635681]
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Tissue distribution of vista52711
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Transcription factor that possibly regulate vista52711[chr6:88635405-88635681]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 88635041 88635681 RUNX3 UCSC Txn Factor no Conserved 108540958
chr6 88635058 88635764 NFIC UCSC Txn Factor no Conserved 108540959
chr6 88635282 88635709 RELA UCSC Txn Factor no Conserved 108540960
chr6 88635294 88635609 PAX5 UCSC Txn Factor no Conserved 108540961
chr6 88635328 88635704 FOXM1 UCSC Txn Factor no Conserved 108540962
chr6 88635382 88635712 BHLHE40 UCSC Txn Factor no Conserved 108540963
chr6 88635405 88635641 MEF2A UCSC Txn Factor no Conserved 108540964
chr6 88635448 88635689 TCF12 UCSC Txn Factor no Conserved 108540965
chr6 88635441 88635445 LFA1 TRANSFAC yes 70398220
chr6 88635441 88635445 LFA1 TRANSFAC yes 103345407
chr6 88635442 88635454 TAL1 JASPAR yes 70398221
chr6 88635442 88635454 TAL1 JASPAR yes 103345408
chr6 88635449 88635453 ESR1 TRANSFAC yes 70398222
chr6 88635449 88635453 ESR1 TRANSFAC yes 103345409
chr6 88635450 88635469 PAX5 JASPAR yes 70398223
chr6 88635450 88635469 PAX5 JASPAR yes 103345410
chr6 88635458 88635473 RFX5 JASPAR yes 70398224
chr6 88635458 88635473 RFX5 JASPAR yes 103345411
chr6 88635466 88635471 TFAP2A TRANSFAC yes 70398225
chr6 88635466 88635471 TFAP2A TRANSFAC yes 103345412
chr6 88635466 88635472 MZF1 JASPAR yes 70398226
chr6 88635466 88635472 MZF1 JASPAR yes 103345413
chr6 88635466 88635479 NFKB1 JASPAR yes 70398227
chr6 88635466 88635479 NFKB2 JASPAR yes 70398228
chr6 88635466 88635479 NFKB1 JASPAR yes 103345414
chr6 88635466 88635479 NFKB2 JASPAR yes 103345415
chr6 88635467 88635477 NFKB1 JASPAR yes 70398229
chr6 88635467 88635477 RELA JASPAR yes 70398230
chr6 88635467 88635477 NFKB1 JASPAR yes 103345416
chr6 88635467 88635477 RELA JASPAR yes 103345417
chr6 88635467 88635478 NFKB1 JASPAR yes 70398231
chr6 88635467 88635478 NFKB1 JASPAR yes 103345418
chr6 88635468 88635477 NF-kappaB TRANSFAC yes 70398232
chr6 88635468 88635477 NF-kappaB TRANSFAC yes 103345419
chr6 88635468 88635478 NFKB1 JASPAR yes 70398233
chr6 88635468 88635478 RELA JASPAR yes 70398234
chr6 88635468 88635478 NFKB1 JASPAR yes 103345420
chr6 88635468 88635478 RELA JASPAR yes 103345421
chr6 88635468 88635479 NFKB1 JASPAR yes 70398235
chr6 88635468 88635479 NFKB1 JASPAR yes 103345422
chr6 88635469 88635479 RELA JASPAR yes 70398236
chr6 88635469 88635479 REL JASPAR yes 70398237
chr6 88635469 88635479 RELA JASPAR yes 103345423
chr6 88635469 88635479 REL JASPAR yes 103345424
chr6 88635473 88635479 MZF1 JASPAR yes 70398238
chr6 88635473 88635479 MZF1 JASPAR yes 103345425
chr6 88635491 88635512 IRF1 JASPAR yes 70398239
chr6 88635491 88635512 IRF1 JASPAR yes 103345426
chr6 88635496 88635514 IRF2 JASPAR yes 70398240
chr6 88635496 88635514 IRF2 JASPAR yes 103345427
chr6 88635497 88635518 IRF1 JASPAR yes 70398241
chr6 88635497 88635518 IRF1 JASPAR yes 103345428
chr6 88635499 88635514 STAT2 JASPAR yes 70398242
chr6 88635499 88635514 STAT2 JASPAR yes 103345429
chr6 88635501 88635513 IRF1 JASPAR yes 70398243
chr6 88635501 88635513 IRF1 JASPAR yes 103345430
chr6 88635502 88635517 MEF2A JASPAR yes 70398244
chr6 88635502 88635517 MEF2A JASPAR yes 103345431
chr6 88635503 88635518 MEF2C JASPAR yes 70398245
chr6 88635503 88635518 MEF2C JASPAR yes 103345432
chr6 88635504 88635516 MEF2A JASPAR yes 70398246
chr6 88635504 88635516 MEF2B JASPAR yes 70398247
chr6 88635504 88635516 MEF2D JASPAR yes 70398248
chr6 88635504 88635516 MEF2A JASPAR yes 103345433
chr6 88635504 88635516 MEF2B JASPAR yes 103345434
chr6 88635504 88635516 MEF2D JASPAR yes 103345435
chr6 88635505 88635515 MEF2A JASPAR yes 70398249
chr6 88635505 88635515 MEF2A JASPAR yes 103345436
chr6 88635506 88635510 YY1 TRANSFAC yes 70398250
chr6 88635506 88635510 YY1 TRANSFAC yes 103345437
chr6 88635535 88635547 HES5 JASPAR yes 70398251
chr6 88635535 88635547 HES7 JASPAR yes 70398252
chr6 88635535 88635547 HES5 JASPAR yes 103345438
chr6 88635535 88635547 HES7 JASPAR yes 103345439
chr6 88635536 88635546 BHLHE40 JASPAR yes 70398253
chr6 88635536 88635546 HEY1 JASPAR yes 70398254
chr6 88635536 88635546 HEY2 JASPAR yes 70398255
chr6 88635536 88635546 MAX JASPAR yes 70398256
chr6 88635536 88635546 MNT JASPAR yes 70398257
chr6 88635536 88635546 TFE3 JASPAR yes 70398258
chr6 88635536 88635546 TFEB JASPAR yes 70398259
chr6 88635536 88635546 BHLHE40 JASPAR yes 103345440
chr6 88635536 88635546 HEY1 JASPAR yes 103345441
chr6 88635536 88635546 HEY2 JASPAR yes 103345442
chr6 88635536 88635546 MAX JASPAR yes 103345443
chr6 88635536 88635546 MNT JASPAR yes 103345444
chr6 88635536 88635546 TFE3 JASPAR yes 103345445
chr6 88635536 88635546 TFEB JASPAR yes 103345446
chr6 88635537 88635544 USF1 JASPAR yes 70398260
chr6 88635537 88635544 USF1 JASPAR yes 103345447
chr6 88635538 88635543 MYC TRANSFAC yes 70398261
chr6 88635538 88635543 USF1 TRANSFAC yes 70398262
chr6 88635538 88635543 USF2 TRANSFAC yes 70398263
chr6 88635538 88635543 MYC TRANSFAC yes 103345448
chr6 88635538 88635543 USF1 TRANSFAC yes 103345449
chr6 88635538 88635543 USF2 TRANSFAC yes 103345450
chr6 88635539 88635552 SMAD2 JASPAR yes 70398264
chr6 88635539 88635552 SMAD2 JASPAR yes 103345451
chr6 88635555 88635565 ID4 JASPAR yes 70398265
chr6 88635555 88635565 TCF3 JASPAR yes 70398266
chr6 88635555 88635565 TCF4 JASPAR yes 70398267
chr6 88635555 88635565 ID4 JASPAR yes 103345452
chr6 88635555 88635565 TCF3 JASPAR yes 103345453
chr6 88635555 88635565 TCF4 JASPAR yes 103345454
chr6 88635560 88635571 ELK4 JASPAR yes 70398268
chr6 88635560 88635571 FLI1 JASPAR yes 70398269
chr6 88635560 88635571 ELK4 JASPAR yes 103345455
chr6 88635560 88635571 FLI1 JASPAR yes 103345456
chr6 88635561 88635571 ERF JASPAR yes 70398270
chr6 88635561 88635571 ETS1 JASPAR yes 70398271
chr6 88635561 88635571 ERF JASPAR yes 103345457
chr6 88635561 88635571 ETS1 JASPAR yes 103345458
chr6 88635561 88635572 ETV2 JASPAR yes 70398272
chr6 88635561 88635572 ETV2 JASPAR yes 103345459
chr6 88635569 88635575 ZNF354C JASPAR yes 70398273
chr6 88635569 88635575 ZNF354C JASPAR yes 103345460
chr6 88635652 88635663 DUX4 JASPAR yes 70398274
chr6 88635652 88635663 DUX4 JASPAR yes 103345461
chr6 88635652 88635666 BATF3 JASPAR yes 70398275
chr6 88635652 88635666 BATF3 JASPAR yes 103345462
SNP sites on vista52711[chr6:88635405-88635681]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 88635434 rs117070138 C G,T
BHLHE40 FOXM1 MEF2A NFIC PAX5 RELA RUNX3
9177791
chr6 88635440 rs9344745 C T
BHLHE40 FOXM1 MEF2A NFIC PAX5 RELA RUNX3
9177792
chr6 88635614 rs12194384 G T
BHLHE40 FOXM1 MEF2A NFIC RELA RUNX3 TCF12
9177793
Genes possibly regulated by vista52711[chr6:88635405-88635681]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52711[chr6:88635405-88635681]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results