EnhancerDB
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  3. vista52712[chr6:88889388-88889661]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52712[chr6:88889388-88889661]
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Tissue distribution of vista52712
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Transcription factor that possibly regulate vista52712[chr6:88889388-88889661]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 88889428 88889841 RELA UCSC Txn Factor no Conserved 108540966
chr6 88889402 88889410 FOXC1 JASPAR yes 70398276
chr6 88889402 88889410 FOXC1 JASPAR yes 103353473
chr6 88889412 88889422 GSC2 JASPAR yes 70398277
chr6 88889412 88889422 GSC2 JASPAR yes 103353474
chr6 88889413 88889421 OTX1 JASPAR yes 70398278
chr6 88889413 88889421 OTX2 JASPAR yes 70398279
chr6 88889413 88889421 OTX1 JASPAR yes 103353475
chr6 88889413 88889421 OTX2 JASPAR yes 103353476
chr6 88889421 88889432 FOXA1 JASPAR yes 70398280
chr6 88889421 88889432 FOXA1 JASPAR yes 103353477
chr6 88889421 88889436 FOXA1 JASPAR yes 70398281
chr6 88889421 88889436 FOXA1 JASPAR yes 103353478
chr6 88889429 88889439 GABPA JASPAR yes 70398282
chr6 88889429 88889439 GABPA JASPAR yes 103353479
chr6 88889429 88889440 FLI1 JASPAR yes 70398283
chr6 88889429 88889440 FLI1 JASPAR yes 103353480
chr6 88889430 88889438 EHF JASPAR yes 70398284
chr6 88889430 88889438 EHF JASPAR yes 103353481
chr6 88889449 88889464 RFX5 JASPAR yes 70398285
chr6 88889449 88889464 RFX5 JASPAR yes 103353482
chr6 88889458 88889473 SCRT1 JASPAR yes 70398286
chr6 88889458 88889473 SCRT1 JASPAR yes 103353483
chr6 88889460 88889473 SCRT2 JASPAR yes 70398287
chr6 88889460 88889473 SCRT2 JASPAR yes 103353484
chr6 88889462 88889468 PTF TRANSFAC yes 70398288
chr6 88889462 88889468 PTF TRANSFAC yes 103353485
chr6 88889482 88889503 IRF1 JASPAR yes 70398289
chr6 88889482 88889503 IRF1 JASPAR yes 103353486
chr6 88889484 88889505 ZNF263 JASPAR yes 70398290
chr6 88889484 88889505 ZNF263 JASPAR yes 103353487
chr6 88889487 88889508 ZNF263 JASPAR yes 70398291
chr6 88889487 88889508 ZNF263 JASPAR yes 103353488
chr6 88889488 88889509 IRF1 JASPAR yes 70398292
chr6 88889488 88889509 IRF1 JASPAR yes 103353489
chr6 88889492 88889506 SPI1 JASPAR yes 70398293
chr6 88889492 88889506 SPIC JASPAR yes 70398294
chr6 88889492 88889506 SPI1 JASPAR yes 103353490
chr6 88889492 88889506 SPIC JASPAR yes 103353491
chr6 88889493 88889506 ELF1 JASPAR yes 70398295
chr6 88889493 88889506 ELF1 JASPAR yes 103353492
chr6 88889494 88889506 EHF JASPAR yes 70398296
chr6 88889494 88889506 ELF4 JASPAR yes 70398297
chr6 88889494 88889506 EHF JASPAR yes 103353493
chr6 88889494 88889506 ELF4 JASPAR yes 103353494
chr6 88889494 88889507 ELF3 JASPAR yes 70398298
chr6 88889494 88889507 ELF3 JASPAR yes 103353495
chr6 88889495 88889506 ELF5 JASPAR yes 70398299
chr6 88889495 88889506 ETV2 JASPAR yes 70398300
chr6 88889495 88889506 ELF5 JASPAR yes 103353496
chr6 88889495 88889506 ETV2 JASPAR yes 103353497
chr6 88889496 88889503 SPIB JASPAR yes 70398301
chr6 88889496 88889503 SPIB JASPAR yes 103353498
chr6 88889496 88889506 ETV6 JASPAR yes 70398302
chr6 88889496 88889506 ETV6 JASPAR yes 103353499
chr6 88889496 88889507 FLI1 JASPAR yes 70398303
chr6 88889496 88889507 FLI1 JASPAR yes 103353500
chr6 88889497 88889505 EHF JASPAR yes 70398304
chr6 88889497 88889505 EHF JASPAR yes 103353501
chr6 88889498 88889505 SPI1 JASPAR yes 70398305
chr6 88889498 88889505 SPI1 JASPAR yes 103353502
chr6 88889520 88889525 SP1 TRANSFAC yes 70398306
chr6 88889520 88889525 SP1 TRANSFAC yes 103353503
chr6 88889545 88889551 SOX10 JASPAR yes 70398307
chr6 88889545 88889551 SOX10 JASPAR yes 103353504
chr6 88889553 88889565 NHLH1 JASPAR yes 70398308
chr6 88889553 88889565 NHLH1 JASPAR yes 103353505
chr6 88889554 88889564 MSC JASPAR yes 70398309
chr6 88889554 88889564 NHLH1 JASPAR yes 70398310
chr6 88889554 88889564 TFAP4 JASPAR yes 70398311
chr6 88889554 88889564 MSC JASPAR yes 103353506
chr6 88889554 88889564 NHLH1 JASPAR yes 103353507
chr6 88889554 88889564 TFAP4 JASPAR yes 103353508
chr6 88889585 88889595 MZF1 JASPAR yes 70398312
chr6 88889585 88889595 MZF1 JASPAR yes 103353509
chr6 88889595 88889600 TFAP2A TRANSFAC yes 70398313
chr6 88889595 88889600 TFAP2A TRANSFAC yes 103353510
chr6 88889595 88889601 MZF1 JASPAR yes 70398314
chr6 88889595 88889601 MZF1 JASPAR yes 103353511
chr6 88889598 88889613 STAT2 JASPAR yes 70398315
chr6 88889598 88889613 STAT2 JASPAR yes 103353512
chr6 88889598 88889616 NR3C1 JASPAR yes 70398316
chr6 88889598 88889616 NR3C1 JASPAR yes 103353513
chr6 88889613 88889630 RARA JASPAR yes 70398317
chr6 88889613 88889630 RXRA JASPAR yes 70398318
chr6 88889613 88889630 RARA JASPAR yes 103353514
chr6 88889613 88889630 RXRA JASPAR yes 103353515
chr6 88889617 88889638 ZNF263 JASPAR yes 70398319
chr6 88889617 88889638 ZNF263 JASPAR yes 103353516
chr6 88889618 88889639 ZNF263 JASPAR yes 70398320
chr6 88889618 88889639 ZNF263 JASPAR yes 103353517
chr6 88889622 88889632 MZF1 JASPAR yes 70398321
chr6 88889622 88889632 MZF1 JASPAR yes 103353518
chr6 88889625 88889631 SP1 TRANSFAC yes 70398322
chr6 88889625 88889631 SP1 TRANSFAC yes 103353519
chr6 88889631 88889646 HNF4A JASPAR yes 70398323
chr6 88889631 88889646 HNF4A JASPAR yes 103353520
chr6 88889632 88889647 HNF4G JASPAR yes 70398324
chr6 88889632 88889647 HNF4G JASPAR yes 103353521
chr6 88889641 88889651 FIGLA JASPAR yes 70398325
chr6 88889641 88889651 FIGLA JASPAR yes 103353522
chr6 88889643 88889648 USF2 TRANSFAC yes 70398326
chr6 88889643 88889648 USF2 TRANSFAC yes 103353523
chr6 88889645 88889656 GCM1 JASPAR yes 70398327
chr6 88889645 88889656 GCM1 JASPAR yes 103353524
chr6 88889646 88889661 HSF1 JASPAR yes 70398328
chr6 88889646 88889661 HSF1 JASPAR yes 103353525
chr6 88889647 88889660 HSF4 JASPAR yes 70398329
chr6 88889647 88889660 HSF4 JASPAR yes 103353526
chr6 88889651 88889662 NFKB1 JASPAR yes 70398330
chr6 88889651 88889662 NFKB1 JASPAR yes 103353527
chr6 88889652 88889667 PRDM1 JASPAR yes 70398331
chr6 88889652 88889667 PRDM1 JASPAR yes 103353528
chr6 88889654 88889664 NFATC3 JASPAR yes 70398332
chr6 88889654 88889664 NFATC3 JASPAR yes 103353529
SNP sites on vista52712[chr6:88889388-88889661]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 88889408 rs544137903 A G
FOXC1
9178659
chr6 88889496 rs140847266 A G
EHF ELF1 ELF3 ELF4 ELF5 ETV2 ETV6 FLI1 IRF1 RELA SPI1 SPIB SPIC ZNF263
9178660
Genes possibly regulated by vista52712[chr6:88889388-88889661]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 88849583 88876078 - CNR1 ENSG00000118432.11 88876078 0.86 0.99 6795 86690
Expression level of Genes
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miRNAs possibly regulated by vista52712[chr6:88889388-88889661]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results