EnhancerDB
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  3. vista52728[chr6:89754563-89754924]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52728[chr6:89754563-89754924]
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Tissue distribution of vista52728
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Transcription factor that possibly regulate vista52728[chr6:89754563-89754924]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 89754564 89754573 SP1 TRANSFAC yes 70399059
chr6 89754564 89754573 SP1 TRANSFAC yes 103391304
chr6 89754571 89754575 H4TF2 TRANSFAC yes 70399060
chr6 89754571 89754575 H4TF2 TRANSFAC yes 103391305
chr6 89754579 89754590 TFAP2A JASPAR yes 70399061
chr6 89754579 89754590 TFAP2B JASPAR yes 70399062
chr6 89754579 89754590 TFAP2C JASPAR yes 70399063
chr6 89754579 89754590 TFAP2A JASPAR yes 103391306
chr6 89754579 89754590 TFAP2B JASPAR yes 103391307
chr6 89754579 89754590 TFAP2C JASPAR yes 103391308
chr6 89754588 89754602 RORA JASPAR yes 70399064
chr6 89754588 89754602 RORA JASPAR yes 103391309
chr6 89754589 89754599 RORA JASPAR yes 70399065
chr6 89754589 89754599 RORA JASPAR yes 103391310
chr6 89754594 89754598 YY1 TRANSFAC yes 70399066
chr6 89754594 89754598 YY1 TRANSFAC yes 103391311
chr6 89754614 89754619 ETS2 TRANSFAC yes 70399067
chr6 89754614 89754619 ETS2 TRANSFAC yes 103391312
chr6 89754630 89754635 ETS2 TRANSFAC yes 70399068
chr6 89754630 89754635 ETS2 TRANSFAC yes 103391313
chr6 89754650 89754665 MEF2A JASPAR yes 70399069
chr6 89754650 89754665 MEF2A JASPAR yes 103391314
chr6 89754651 89754666 MEF2C JASPAR yes 70399070
chr6 89754651 89754666 MEF2C JASPAR yes 103391315
chr6 89754652 89754664 MEF2A JASPAR yes 70399071
chr6 89754652 89754664 MEF2B JASPAR yes 70399072
chr6 89754652 89754664 MEF2D JASPAR yes 70399073
chr6 89754652 89754664 MEF2A JASPAR yes 103391316
chr6 89754652 89754664 MEF2B JASPAR yes 103391317
chr6 89754652 89754664 MEF2D JASPAR yes 103391318
chr6 89754653 89754663 MEF2A JASPAR yes 70399074
chr6 89754653 89754663 MEF2A JASPAR yes 103391319
chr6 89754654 89754658 YY1 TRANSFAC yes 70399075
chr6 89754654 89754658 YY1 TRANSFAC yes 103391320
chr6 89754675 89754690 TP53 JASPAR yes 70399076
chr6 89754675 89754690 TP53 JASPAR yes 103391321
chr6 89754748 89754757 SOX9 JASPAR yes 70399077
chr6 89754748 89754757 SOX9 JASPAR yes 103391322
chr6 89754750 89754759 SRY JASPAR yes 70399078
chr6 89754750 89754759 SRY JASPAR yes 103391323
chr6 89754774 89754789 AR JASPAR yes 70399079
chr6 89754774 89754789 AR JASPAR yes 103391324
chr6 89754778 89754784 SOX10 JASPAR yes 70399080
chr6 89754778 89754784 SOX10 JASPAR yes 103391325
chr6 89754790 89754798 EHF JASPAR yes 70399081
chr6 89754790 89754798 EHF JASPAR yes 103391326
chr6 89754811 89754832 IRF1 JASPAR yes 70399082
chr6 89754811 89754832 IRF1 JASPAR yes 103391327
chr6 89754814 89754824 GABPA JASPAR yes 70399083
chr6 89754814 89754824 GABPA JASPAR yes 103391328
chr6 89754814 89754827 ELF1 JASPAR yes 70399084
chr6 89754814 89754827 ELF1 JASPAR yes 103391329
chr6 89754814 89754828 SPI1 JASPAR yes 70399085
chr6 89754814 89754828 SPIC JASPAR yes 70399086
chr6 89754814 89754828 SPI1 JASPAR yes 103391330
chr6 89754814 89754828 SPIC JASPAR yes 103391331
chr6 89754817 89754824 SPIB JASPAR yes 70399087
chr6 89754817 89754824 SPIB JASPAR yes 103391332
chr6 89754824 89754830 TCF1 TRANSFAC yes 70399088
chr6 89754824 89754830 TCF1 TRANSFAC yes 103391333
chr6 89754824 89754831 TCF4 TRANSFAC yes 70399089
chr6 89754824 89754831 TCF4 TRANSFAC yes 103391334
chr6 89754849 89754860 FLI1 JASPAR yes 70399090
chr6 89754849 89754860 FLI1 JASPAR yes 103391335
chr6 89754850 89754864 SPI1 JASPAR yes 70399091
chr6 89754850 89754864 SPIC JASPAR yes 70399092
chr6 89754850 89754864 SPI1 JASPAR yes 103391336
chr6 89754850 89754864 SPIC JASPAR yes 103391337
chr6 89754853 89754858 ETS2 TRANSFAC yes 70399093
chr6 89754853 89754858 ETS2 TRANSFAC yes 103391338
chr6 89754874 89754882 GATA1 TRANSFAC yes 70399094
chr6 89754874 89754882 GATA1 TRANSFAC yes 103391339
chr6 89754874 89754888 GATA2 JASPAR yes 70399095
chr6 89754874 89754888 GATA2 JASPAR yes 103391340
chr6 89754876 89754884 GATA3 JASPAR yes 70399096
chr6 89754876 89754884 GATA5 JASPAR yes 70399097
chr6 89754876 89754884 GATA3 JASPAR yes 103391341
chr6 89754876 89754884 GATA5 JASPAR yes 103391342
chr6 89754916 89754934 NR3C1 JASPAR yes 70399098
chr6 89754916 89754934 NR3C1 JASPAR yes 103391343
chr6 89754917 89754932 AR JASPAR yes 70399099
chr6 89754917 89754932 AR JASPAR yes 103391344
chr6 89754917 89754934 NR3C2 JASPAR yes 70399100
chr6 89754917 89754934 NR3C2 JASPAR yes 103391345
chr6 89754918 89754938 ESR1 JASPAR yes 70399101
chr6 89754918 89754938 ESR1 JASPAR yes 103391346
SNP sites on vista52728[chr6:89754563-89754924]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 89754750 rs855575 C A
SOX9 SRY
9181992
chr6 89754758 rs855574 T C
SRY
9181993
chr6 89754839 rs113179440 A G no 9181994
chr6 89754916 rs146353827 C T
NR3C1
9181995
Genes possibly regulated by vista52728[chr6:89754563-89754924]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 89319985 89673348 - RNGTT ENSG00000111880.11 89673348 0.63 0.99 6796 18785
chr6 89674246 89676685 + AL079342.1 ENSG00000203863.1 89674246 0.92 0.85 6797 19683
chr6 89790470 89794879 + PNRC1 ENSG00000146278.10 89790470 0.71 1.0 6798 64454
chr6 89805678 89827800 - SRSF12 ENSG00000154548.8 89827800 0.94 0.87 6799 27124
Expression level of Genes
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miRNAs possibly regulated by vista52728[chr6:89754563-89754924]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results