EnhancerDB
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  3. vista5273[chr1:223904365-223904567]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5273[chr1:223904365-223904567]
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Tissue distribution of vista5273
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Transcription factor that possibly regulate vista5273[chr1:223904365-223904567]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223904424 223904432 HOXA5 JASPAR yes 35671769
chr1 223904424 223904432 HOXA5 JASPAR yes 118466785
chr1 223904435 223904446 FLI1 JASPAR yes 35671770
chr1 223904435 223904446 FLI1 JASPAR yes 118466786
chr1 223904436 223904446 ETV6 JASPAR yes 35671771
chr1 223904436 223904446 ETV6 JASPAR yes 118466787
chr1 223904436 223904450 SPIC JASPAR yes 35671772
chr1 223904436 223904450 SPIC JASPAR yes 118466788
chr1 223904437 223904444 SPI1 JASPAR yes 35671773
chr1 223904437 223904444 SPI1 JASPAR yes 118466789
chr1 223904437 223904445 EHF JASPAR yes 35671774
chr1 223904437 223904445 EHF JASPAR yes 118466790
chr1 223904439 223904446 SPIB JASPAR yes 35671775
chr1 223904439 223904446 SPIB JASPAR yes 118466791
chr1 223904439 223904454 RUNX2 JASPAR yes 35671776
chr1 223904439 223904454 RUNX2 JASPAR yes 118466792
chr1 223904444 223904464 RREB1 JASPAR yes 35671777
chr1 223904444 223904464 RREB1 JASPAR yes 118466793
chr1 223904456 223904461 SP1 TRANSFAC yes 35671778
chr1 223904456 223904461 SP1 TRANSFAC yes 118466794
chr1 223904468 223904482 STAT1 JASPAR yes 35671779
chr1 223904468 223904482 STAT1 JASPAR yes 118466795
chr1 223904468 223904483 STAT2 JASPAR yes 35671780
chr1 223904468 223904483 STAT2 JASPAR yes 118466796
chr1 223904476 223904482 HiNF-A TRANSFAC yes 35671781
chr1 223904476 223904482 HiNF-A TRANSFAC yes 118466797
chr1 223904514 223904528 PAX6 JASPAR yes 35671782
chr1 223904514 223904528 PAX6 JASPAR yes 118466798
chr1 223904560 223904573 EOMES JASPAR yes 35671783
chr1 223904560 223904573 EOMES JASPAR yes 118466799
chr1 223904562 223904572 TBR1 JASPAR yes 35671784
chr1 223904562 223904572 TBR1 JASPAR yes 118466800
chr1 223904562 223904573 TBX20 JASPAR yes 35671785
chr1 223904562 223904573 TBX2 JASPAR yes 35671786
chr1 223904562 223904573 TBX20 JASPAR yes 118466801
chr1 223904562 223904573 TBX2 JASPAR yes 118466802
chr1 223904563 223904573 TBX21 JASPAR yes 35671787
chr1 223904563 223904573 TBX21 JASPAR yes 118466803
chr1 223904564 223904567 MYB TRANSFAC yes 35671788
chr1 223904564 223904567 MYB TRANSFAC yes 118466804
SNP sites on vista5273[chr1:223904365-223904567]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista5273[chr1:223904365-223904567]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223711349 223853436 - CAPN8 ENSG00000203697.7 223853436 0.92 0.99 1874 49071
chr1 223889295 223963720 + CAPN2 ENSG00000162909.13 223889295 0.77 1.0 1875 84930
Expression level of Genes
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miRNAs possibly regulated by vista5273[chr1:223904365-223904567]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results