EnhancerDB
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  3. vista52730[chr6:89758081-89758394]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52730[chr6:89758081-89758394]
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Tissue distribution of vista52730
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Transcription factor that possibly regulate vista52730[chr6:89758081-89758394]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 89758080 89758424 STAT3 UCSC Txn Factor no Conserved 108540984
chr6 89758067 89758081 ATF7 JASPAR yes 70399151
chr6 89758067 89758081 ATF7 JASPAR yes 103391830
chr6 89758081 89758085 YY1 TRANSFAC yes 70399152
chr6 89758081 89758085 YY1 TRANSFAC yes 103391831
chr6 89758093 89758114 IRF1 JASPAR yes 70399153
chr6 89758093 89758114 IRF1 JASPAR yes 103391832
chr6 89758095 89758110 STAT2 JASPAR yes 70399154
chr6 89758095 89758110 STAT2 JASPAR yes 103391833
chr6 89758096 89758110 STAT1 JASPAR yes 70399155
chr6 89758096 89758110 STAT1 JASPAR yes 103391834
chr6 89758111 89758115 YY1 TRANSFAC yes 70399156
chr6 89758111 89758115 YY1 TRANSFAC yes 103391835
chr6 89758115 89758127 PROX1 JASPAR yes 70399157
chr6 89758115 89758127 PROX1 JASPAR yes 103391836
chr6 89758143 89758159 ZNF143 JASPAR yes 70399158
chr6 89758143 89758159 ZNF143 JASPAR yes 103391837
chr6 89758145 89758162 ZNF410 JASPAR yes 70399159
chr6 89758145 89758162 ZNF410 JASPAR yes 103391838
chr6 89758175 89758190 LEF1 JASPAR yes 70399160
chr6 89758175 89758190 LEF1 JASPAR yes 103391839
chr6 89758182 89758196 GATA2 JASPAR yes 70399161
chr6 89758182 89758196 GATA2 JASPAR yes 103391840
chr6 89758186 89758194 GATA3 JASPAR yes 70399162
chr6 89758186 89758194 GATA5 JASPAR yes 70399163
chr6 89758186 89758194 GATA3 JASPAR yes 103391841
chr6 89758186 89758194 GATA5 JASPAR yes 103391842
chr6 89758219 89758237 MAFF JASPAR yes 70399164
chr6 89758219 89758237 MAFF JASPAR yes 103391843
chr6 89758221 89758236 MAFK JASPAR yes 70399165
chr6 89758221 89758236 MAFK JASPAR yes 103391844
chr6 89758222 89758236 JUN JASPAR yes 70399166
chr6 89758222 89758236 JUN JASPAR yes 103391845
chr6 89758224 89758235 BATF JASPAR yes 70399167
chr6 89758224 89758235 BATF JASPAR yes 103391846
chr6 89758225 89758236 FOSL2 JASPAR yes 70399168
chr6 89758225 89758236 JUNB JASPAR yes 70399169
chr6 89758225 89758236 FOSL2 JASPAR yes 103391847
chr6 89758225 89758236 JUNB JASPAR yes 103391848
chr6 89758226 89758237 FOS JASPAR yes 70399170
chr6 89758226 89758237 FOSL1 JASPAR yes 70399171
chr6 89758226 89758237 JUND JASPAR yes 70399172
chr6 89758226 89758237 NFE2 JASPAR yes 70399173
chr6 89758226 89758237 FOS JASPAR yes 103391849
chr6 89758226 89758237 FOSL1 JASPAR yes 103391850
chr6 89758226 89758237 JUND JASPAR yes 103391851
chr6 89758226 89758237 NFE2 JASPAR yes 103391852
chr6 89758227 89758236 JDP2 JASPAR yes 70399174
chr6 89758227 89758236 JDP2 JASPAR yes 103391853
chr6 89758227 89758238 FOSL2 JASPAR yes 70399175
chr6 89758227 89758238 JUNB JASPAR yes 70399176
chr6 89758227 89758238 FOSL2 JASPAR yes 103391854
chr6 89758227 89758238 JUNB JASPAR yes 103391855
chr6 89758227 89758241 JUN JASPAR yes 70399177
chr6 89758227 89758241 JUN JASPAR yes 103391856
chr6 89758228 89758239 BATF JASPAR yes 70399178
chr6 89758228 89758239 BATF JASPAR yes 103391857
chr6 89758243 89758259 NFYA JASPAR yes 70399179
chr6 89758243 89758259 NFYA JASPAR yes 103391858
chr6 89758246 89758261 NFYB JASPAR yes 70399180
chr6 89758246 89758261 NFYB JASPAR yes 103391859
chr6 89758248 89758253 NFY TRANSFAC yes 70399181
chr6 89758248 89758253 NFY TRANSFAC yes 103391860
chr6 89758253 89758264 USF1 JASPAR yes 70399182
chr6 89758253 89758264 USF2 JASPAR yes 70399183
chr6 89758253 89758264 USF1 JASPAR yes 103391861
chr6 89758253 89758264 USF2 JASPAR yes 103391862
chr6 89758281 89758296 STAT1 JASPAR yes 70399184
chr6 89758281 89758296 STAT1 JASPAR yes 103391863
chr6 89758283 89758294 STAT1 JASPAR yes 70399185
chr6 89758283 89758294 STAT3 JASPAR yes 70399186
chr6 89758283 89758294 STAT1 JASPAR yes 103391864
chr6 89758283 89758294 STAT3 JASPAR yes 103391865
chr6 89758288 89758294 ETS1 JASPAR yes 70399187
chr6 89758288 89758294 SPI1 JASPAR yes 70399188
chr6 89758288 89758294 ETS1 JASPAR yes 103391866
chr6 89758288 89758294 SPI1 JASPAR yes 103391867
chr6 89758291 89758309 NR3C1 JASPAR yes 70399189
chr6 89758291 89758309 NR3C1 JASPAR yes 103391868
chr6 89758293 89758306 HSF1 JASPAR yes 70399190
chr6 89758293 89758306 HSF4 JASPAR yes 70399191
chr6 89758293 89758306 HSF1 JASPAR yes 103391869
chr6 89758293 89758306 HSF4 JASPAR yes 103391870
chr6 89758297 89758312 HSF1 JASPAR yes 70399192
chr6 89758297 89758312 HSF1 JASPAR yes 103391871
chr6 89758298 89758311 HSF1 JASPAR yes 70399193
chr6 89758298 89758311 HSF2 JASPAR yes 70399194
chr6 89758298 89758311 HSF4 JASPAR yes 70399195
chr6 89758298 89758311 HSF1 JASPAR yes 103391872
chr6 89758298 89758311 HSF2 JASPAR yes 103391873
chr6 89758298 89758311 HSF4 JASPAR yes 103391874
chr6 89758319 89758337 E2F3 JASPAR yes 70399196
chr6 89758319 89758337 E2F3 JASPAR yes 103391875
chr6 89758320 89758336 E2F2 JASPAR yes 70399197
chr6 89758320 89758336 E2F2 JASPAR yes 103391876
chr6 89758326 89758331 SP1 TRANSFAC yes 70399198
chr6 89758326 89758331 SP1 TRANSFAC yes 103391877
chr6 89758334 89758338 YY1 TRANSFAC yes 70399199
chr6 89758334 89758338 YY1 TRANSFAC yes 103391878
chr6 89758335 89758346 E2F6 JASPAR yes 70399200
chr6 89758335 89758346 E2F6 JASPAR yes 103391879
chr6 89758351 89758355 NFE TRANSFAC yes 70399201
chr6 89758351 89758355 NFE TRANSFAC yes 103391880
chr6 89758375 89758386 USF1 JASPAR yes 70399202
chr6 89758375 89758386 USF1 JASPAR yes 103391881
chr6 89758376 89758386 MAX JASPAR yes 70399203
chr6 89758376 89758386 MAX JASPAR yes 103391882
SNP sites on vista52730[chr6:89758081-89758394]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 89758121 rs138922438 C A,T
PROX1 STAT3
9182052
chr6 89758341 rs149431723 C T
E2F6 STAT3
9182053
chr6 89758346 rs144427252 C G
E2F6 STAT3
9182054
Genes possibly regulated by vista52730[chr6:89758081-89758394]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 89319985 89673348 - RNGTT ENSG00000111880.11 89673348 0.63 0.99 6796 15267
chr6 89674246 89676685 + AL079342.1 ENSG00000203863.1 89674246 0.92 0.85 6797 16165
chr6 89790470 89794879 + PNRC1 ENSG00000146278.10 89790470 0.71 1.0 6798 67924
chr6 89805678 89827800 - SRSF12 ENSG00000154548.8 89827800 0.94 0.87 6799 30594
chr6 89855769 89875284 + PM20D2 ENSG00000146281.5 89855769 0.69 0.99 6800 2625
Expression level of Genes
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miRNAs possibly regulated by vista52730[chr6:89758081-89758394]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results