EnhancerDB
  1. Home
  2. Enhancers
  3. vista52734[chr6:90008898-90009057]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52734[chr6:90008898-90009057]
Back to top
Tissue distribution of vista52734
Back to top
Transcription factor that possibly regulate vista52734[chr6:90008898-90009057]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 90008415 90008965 TCF7L2 UCSC Txn Factor no Conserved 108540987
chr6 90008908 90008912 LFA1 TRANSFAC yes 70399406
chr6 90008909 90008918 SNAI2 JASPAR yes 70399407
chr6 90008909 90008919 ID4 JASPAR yes 70399408
chr6 90008909 90008919 NHLH1 JASPAR yes 70399409
chr6 90008909 90008919 TCF3 JASPAR yes 70399410
chr6 90008909 90008919 TCF4 JASPAR yes 70399411
chr6 90008911 90008920 ZEB1 JASPAR yes 70399412
chr6 90008927 90008933 LEF1 TRANSFAC yes 70399413
chr6 90008927 90008933 SOX10 JASPAR yes 70399414
chr6 90008931 90008941 POU6F2 JASPAR yes 70399415
chr6 90008943 90008956 SCRT2 JASPAR yes 70399416
chr6 90008959 90008966 NFATC2 JASPAR yes 70399417
chr6 90008960 90008968 FOXO3 JASPAR yes 70399418
chr6 90008964 90008974 SREBF2 JASPAR yes 70399419
chr6 90008964 90008975 USF2 JASPAR yes 70399420
chr6 90008993 90009012 RFX2 JASPAR yes 70399421
chr6 90008997 90009013 RFX2 JASPAR yes 70399422
chr6 90008997 90009013 RFX3 JASPAR yes 70399423
chr6 90008997 90009013 RFX4 JASPAR yes 70399424
chr6 90008997 90009013 RFX5 JASPAR yes 70399425
chr6 90008998 90009017 RFX2 JASPAR yes 70399426
chr6 90009000 90009015 RFX5 JASPAR yes 70399427
chr6 90009010 90009016 SOX10 JASPAR yes 70399428
chr6 90009042 90009050 MGA JASPAR yes 70399429
chr6 90009042 90009050 TBX15 JASPAR yes 70399430
chr6 90009042 90009050 TBX1 JASPAR yes 70399431
chr6 90009042 90009050 TBX4 JASPAR yes 70399432
chr6 90009042 90009050 TBX5 JASPAR yes 70399433
SNP sites on vista52734[chr6:90008898-90009057]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 90008923 rs13197385 G A,C
TCF7L2
9182829
chr6 90008961 rs7747043 G A
FOXO3 NFATC2 TCF7L2
9182830
chr6 90008978 rs113739623 A G no 9182831
Genes possibly regulated by vista52734[chr6:90008898-90009057]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 89887220 89940997 - GABRR1 ENSG00000146276.7 89940997 0.97 1.0 6801 32099
chr6 89966927 90025018 - GABRR2 ENSG00000111886.9 90025018 0.76 1.0 6802 84039
chr6 90036344 90062567 - UBE2J1 ENSG00000198833.6 90062567 0.74 0.99 6803 46490
Expression level of Genes
Back to top
miRNAs possibly regulated by vista52734[chr6:90008898-90009057]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results