EnhancerDB
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  3. vista52735[chr6:90031448-90031662]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52735[chr6:90031448-90031662]
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Tissue distribution of vista52735
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Transcription factor that possibly regulate vista52735[chr6:90031448-90031662]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 90031326 90031613 RUNX3 UCSC Txn Factor no Conserved 108540988
chr6 90031378 90031592 TEAD4 UCSC Txn Factor no Conserved 108540989
chr6 90031420 90031642 CEBPB UCSC Txn Factor no Conserved 108540990
chr6 90031424 90031572 TAL1 UCSC Txn Factor no Conserved 108540991
chr6 90031457 90031467 RUNX3 JASPAR yes 70399434
chr6 90031457 90031467 RUNX3 JASPAR yes 103399645
chr6 90031462 90031466 ESR1 TRANSFAC yes 70399435
chr6 90031462 90031466 ESR1 TRANSFAC yes 103399646
chr6 90031469 90031473 ESR1 TRANSFAC yes 70399436
chr6 90031469 90031473 ESR1 TRANSFAC yes 103399647
chr6 90031478 90031496 NR3C1 JASPAR yes 70399437
chr6 90031478 90031496 NR3C1 JASPAR yes 103399648
chr6 90031479 90031487 EHF JASPAR yes 70399438
chr6 90031479 90031487 EHF JASPAR yes 103399649
chr6 90031483 90031488 ETS2 TRANSFAC yes 70399439
chr6 90031483 90031488 ETS2 TRANSFAC yes 103399650
chr6 90031483 90031493 TEAD1 JASPAR yes 70399440
chr6 90031483 90031493 TEAD4 JASPAR yes 70399441
chr6 90031483 90031493 TEAD1 JASPAR yes 103399651
chr6 90031483 90031493 TEAD4 JASPAR yes 103399652
chr6 90031484 90031492 TEAD3 JASPAR yes 70399442
chr6 90031484 90031492 TEAD3 JASPAR yes 103399653
chr6 90031494 90031506 TGIF2 JASPAR yes 70399443
chr6 90031494 90031506 TGIF2 JASPAR yes 103399654
chr6 90031497 90031502 MYC TRANSFAC yes 70399444
chr6 90031497 90031502 MYC TRANSFAC yes 103399655
chr6 90031500 90031514 MTF1 JASPAR yes 70399445
chr6 90031500 90031514 MTF1 JASPAR yes 103399656
chr6 90031523 90031529 MAZ TRANSFAC yes 70399446
chr6 90031523 90031529 MAZ TRANSFAC yes 103399657
chr6 90031523 90031534 E2F6 JASPAR yes 70399447
chr6 90031523 90031534 E2F6 JASPAR yes 103399658
chr6 90031526 90031539 NFKB2 JASPAR yes 70399448
chr6 90031526 90031539 NFKB2 JASPAR yes 103399659
chr6 90031527 90031532 ETS2 TRANSFAC yes 70399449
chr6 90031527 90031532 ETS2 TRANSFAC yes 103399660
chr6 90031527 90031537 NFKB1 JASPAR yes 70399450
chr6 90031527 90031537 REL JASPAR yes 70399451
chr6 90031527 90031537 NFKB1 JASPAR yes 103399661
chr6 90031527 90031537 REL JASPAR yes 103399662
chr6 90031527 90031538 NFKB1 JASPAR yes 70399452
chr6 90031527 90031538 NFKB1 JASPAR yes 103399663
chr6 90031528 90031538 NFKB1 JASPAR yes 70399453
chr6 90031528 90031538 REL JASPAR yes 70399454
chr6 90031528 90031538 NFKB1 JASPAR yes 103399664
chr6 90031528 90031538 REL JASPAR yes 103399665
chr6 90031528 90031539 NFKB1 JASPAR yes 70399455
chr6 90031528 90031539 NFKB1 JASPAR yes 103399666
chr6 90031544 90031548 YY1 TRANSFAC yes 70399456
chr6 90031544 90031548 YY1 TRANSFAC yes 103399667
chr6 90031545 90031556 CEBPB JASPAR yes 70399457
chr6 90031545 90031556 CEBPB JASPAR yes 103399668
chr6 90031563 90031574 NRL JASPAR yes 70399458
chr6 90031563 90031574 NRL JASPAR yes 103399669
chr6 90031587 90031593 SOX10 JASPAR yes 70399459
chr6 90031587 90031593 SOX10 JASPAR yes 103399670
chr6 90031601 90031622 IRF1 JASPAR yes 70399460
chr6 90031601 90031622 IRF1 JASPAR yes 103399671
chr6 90031603 90031618 STAT2 JASPAR yes 70399461
chr6 90031603 90031618 STAT2 JASPAR yes 103399672
chr6 90031605 90031619 IRF8 JASPAR yes 70399462
chr6 90031605 90031619 IRF8 JASPAR yes 103399673
chr6 90031605 90031620 IRF9 JASPAR yes 70399463
chr6 90031605 90031620 IRF9 JASPAR yes 103399674
chr6 90031607 90031619 HNF1B JASPAR yes 70399464
chr6 90031607 90031619 HNF1B JASPAR yes 103399675
chr6 90031615 90031618 MYB TRANSFAC yes 70399465
chr6 90031615 90031618 MYB TRANSFAC yes 103399676
chr6 90031646 90031654 EHF JASPAR yes 70399466
chr6 90031646 90031654 EHF JASPAR yes 103399677
chr6 90031646 90031656 SP1 JASPAR yes 70399467
chr6 90031646 90031656 SP1 JASPAR yes 103399678
chr6 90031654 90031673 PAX5 JASPAR yes 70399468
chr6 90031654 90031673 PAX5 JASPAR yes 103399679
chr6 90031657 90031674 PAX1 JASPAR yes 70399469
chr6 90031657 90031674 PAX9 JASPAR yes 70399470
chr6 90031657 90031674 PAX1 JASPAR yes 103399680
chr6 90031657 90031674 PAX9 JASPAR yes 103399681
chr6 90031659 90031673 PAX6 JASPAR yes 70399471
chr6 90031659 90031673 PAX6 JASPAR yes 103399682
SNP sites on vista52735[chr6:90031448-90031662]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 90031457 rs552411290 C T
CEBPB RUNX3 TAL1 TEAD4
9182923
chr6 90031506 rs140440435 G A,C
CEBPB MTF1 RUNX3 TAL1 TEAD4 TGIF2
9182924
chr6 90031637 rs149769122 G A
CEBPB
9182925
Genes possibly regulated by vista52735[chr6:90031448-90031662]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 89887220 89940997 - GABRR1 ENSG00000146276.7 89940997 0.97 1.0 6801 9549
chr6 89966927 90025018 - GABRR2 ENSG00000111886.9 90025018 0.76 1.0 6802 93570
chr6 90036344 90062567 - UBE2J1 ENSG00000198833.6 90062567 0.74 0.99 6803 69095
chr6 90074355 90121989 - RRAGD ENSG00000025039.10 90121989 0.82 1.0 6804 9673
Expression level of Genes
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miRNAs possibly regulated by vista52735[chr6:90031448-90031662]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results