EnhancerDB
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  3. vista52742[chr6:90550185-90550523]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52742[chr6:90550185-90550523]
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Tissue distribution of vista52742
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Transcription factor that possibly regulate vista52742[chr6:90550185-90550523]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 90550192 90550205 NR2F1 JASPAR yes 70399905
chr6 90550192 90550205 NR2F1 JASPAR yes 103415318
chr6 90550196 90550210 NR2F1 JASPAR yes 70399906
chr6 90550196 90550210 NR2F1 JASPAR yes 103415319
chr6 90550228 90550238 MSC JASPAR yes 70399907
chr6 90550228 90550238 MSC JASPAR yes 103415320
chr6 90550238 90550243 ETS2 TRANSFAC yes 70399908
chr6 90550238 90550243 ETS2 TRANSFAC yes 103415321
chr6 90550269 90550279 NFATC3 JASPAR yes 70399909
chr6 90550269 90550279 NFATC3 JASPAR yes 103415322
chr6 90550280 90550294 GLIS2 JASPAR yes 70399910
chr6 90550280 90550294 GLIS2 JASPAR yes 103415323
chr6 90550281 90550295 GLIS3 JASPAR yes 70399911
chr6 90550281 90550295 GLIS3 JASPAR yes 103415324
chr6 90550287 90550300 NR2F1 JASPAR yes 70399912
chr6 90550287 90550300 NR2F1 JASPAR yes 103415325
chr6 90550291 90550295 ESR1 TRANSFAC yes 70399913
chr6 90550291 90550295 ESR1 TRANSFAC yes 103415326
chr6 90550346 90550367 ZNF263 JASPAR yes 70399914
chr6 90550346 90550367 ZNF263 JASPAR yes 103415327
chr6 90550355 90550365 MZF1 JASPAR yes 70399915
chr6 90550355 90550365 MZF1 JASPAR yes 103415328
chr6 90550358 90550363 TFAP2A TRANSFAC yes 70399916
chr6 90550358 90550363 TFAP2A TRANSFAC yes 103415329
chr6 90550358 90550364 MZF1 JASPAR yes 70399917
chr6 90550358 90550364 MZF1 JASPAR yes 103415330
chr6 90550358 90550371 NFKB2 JASPAR yes 70399918
chr6 90550358 90550371 NFKB2 JASPAR yes 103415331
chr6 90550359 90550370 NFKB1 JASPAR yes 70399919
chr6 90550359 90550370 NFKB1 JASPAR yes 103415332
chr6 90550360 90550365 ETS2 TRANSFAC yes 70399920
chr6 90550360 90550365 ETS2 TRANSFAC yes 103415333
chr6 90550402 90550419 RARA JASPAR yes 70399921
chr6 90550402 90550419 RXRA JASPAR yes 70399922
chr6 90550402 90550419 RARA JASPAR yes 103415334
chr6 90550402 90550419 RXRA JASPAR yes 103415335
chr6 90550424 90550430 PEA3 TRANSFAC yes 70399923
chr6 90550424 90550430 PEA3 TRANSFAC yes 103415336
chr6 90550424 90550435 FLI1 JASPAR yes 70399924
chr6 90550424 90550435 FLI1 JASPAR yes 103415337
chr6 90550441 90550456 NFYB JASPAR yes 70399925
chr6 90550441 90550456 NFYB JASPAR yes 103415338
chr6 90550443 90550459 NFYA JASPAR yes 70399926
chr6 90550443 90550459 NFYA JASPAR yes 103415339
chr6 90550448 90550452 H1TF2 TRANSFAC yes 70399927
chr6 90550448 90550452 NFE TRANSFAC yes 70399928
chr6 90550448 90550452 SRF TRANSFAC yes 70399929
chr6 90550448 90550452 H1TF2 TRANSFAC yes 103415340
chr6 90550448 90550452 NFE TRANSFAC yes 103415341
chr6 90550448 90550452 SRF TRANSFAC yes 103415342
chr6 90550455 90550471 E2F2 JASPAR yes 70399930
chr6 90550455 90550471 E2F2 JASPAR yes 103415343
chr6 90550469 90550482 ELF1 JASPAR yes 70399931
chr6 90550469 90550482 ELF1 JASPAR yes 103415344
chr6 90550470 90550482 ELF1 JASPAR yes 70399932
chr6 90550470 90550482 ELF4 JASPAR yes 70399933
chr6 90550470 90550482 ELF1 JASPAR yes 103415345
chr6 90550470 90550482 ELF4 JASPAR yes 103415346
chr6 90550471 90550482 ELF5 JASPAR yes 70399934
chr6 90550471 90550482 ETV2 JASPAR yes 70399935
chr6 90550471 90550482 ELF5 JASPAR yes 103415347
chr6 90550471 90550482 ETV2 JASPAR yes 103415348
chr6 90550472 90550482 ELK1 JASPAR yes 70399936
chr6 90550472 90550482 ELK3 JASPAR yes 70399937
chr6 90550472 90550482 ERF JASPAR yes 70399938
chr6 90550472 90550482 ERG JASPAR yes 70399939
chr6 90550472 90550482 ETS1 JASPAR yes 70399940
chr6 90550472 90550482 ETV1 JASPAR yes 70399941
chr6 90550472 90550482 ETV3 JASPAR yes 70399942
chr6 90550472 90550482 ETV4 JASPAR yes 70399943
chr6 90550472 90550482 ETV6 JASPAR yes 70399944
chr6 90550472 90550482 FEV JASPAR yes 70399945
chr6 90550472 90550482 FLI1 JASPAR yes 70399946
chr6 90550472 90550482 GABPA JASPAR yes 70399947
chr6 90550472 90550482 ELK1 JASPAR yes 103415349
chr6 90550472 90550482 ELK3 JASPAR yes 103415350
chr6 90550472 90550482 ERF JASPAR yes 103415351
chr6 90550472 90550482 ERG JASPAR yes 103415352
chr6 90550472 90550482 ETS1 JASPAR yes 103415353
chr6 90550472 90550482 ETV1 JASPAR yes 103415354
chr6 90550472 90550482 ETV3 JASPAR yes 103415355
chr6 90550472 90550482 ETV4 JASPAR yes 103415356
chr6 90550472 90550482 ETV6 JASPAR yes 103415357
chr6 90550472 90550482 FEV JASPAR yes 103415358
chr6 90550472 90550482 FLI1 JASPAR yes 103415359
chr6 90550472 90550482 GABPA JASPAR yes 103415360
chr6 90550472 90550483 ELK4 JASPAR yes 70399948
chr6 90550472 90550483 FLI1 JASPAR yes 70399949
chr6 90550472 90550483 ELK4 JASPAR yes 103415361
chr6 90550472 90550483 FLI1 JASPAR yes 103415362
chr6 90550473 90550481 EHF JASPAR yes 70399950
chr6 90550473 90550481 FEV JASPAR yes 70399951
chr6 90550473 90550481 EHF JASPAR yes 103415363
chr6 90550473 90550481 FEV JASPAR yes 103415364
chr6 90550474 90550481 SPI1 JASPAR yes 70399952
chr6 90550474 90550481 SPI1 JASPAR yes 103415365
chr6 90550488 90550495 NFATC2 JASPAR yes 70399953
chr6 90550488 90550495 NFATC2 JASPAR yes 103415366
chr6 90550495 90550500 SP1 TRANSFAC yes 70399954
chr6 90550495 90550500 SP1 TRANSFAC yes 103415367
SNP sites on vista52742[chr6:90550185-90550523]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 90550193 rs560021591 G A
NR2F1
9184283
chr6 90550372 rs181487805 G C no 9184284
chr6 90550464 rs571354871 G A
E2F2
9184285
Genes possibly regulated by vista52742[chr6:90550185-90550523]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 90352218 90529442 - MDN1 ENSG00000112159.7 90529442 0.69 0.99 6807 79257
chr6 90604188 90605839 + GJA10 ENSG00000135355.3 90604188 0.0 1.0 6808 46335
Expression level of Genes
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miRNAs possibly regulated by vista52742[chr6:90550185-90550523]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results