EnhancerDB
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  3. vista52744[chr6:90619987-90620233]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52744[chr6:90619987-90620233]
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Tissue distribution of vista52744
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Transcription factor that possibly regulate vista52744[chr6:90619987-90620233]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 90619987 90620002 FOXP1 JASPAR yes 70399999
chr6 90619988 90619994 TBP TRANSFAC yes 70400000
chr6 90619988 90620003 FOXP1 JASPAR yes 70400001
chr6 90619988 90620009 IRF1 JASPAR yes 70400002
chr6 90619989 90620004 FOXP1 JASPAR yes 70400003
chr6 90619989 90620010 IRF1 JASPAR yes 70400004
chr6 90619990 90620005 FOXP1 JASPAR yes 70400005
chr6 90619990 90620011 IRF1 JASPAR yes 70400006
chr6 90619991 90620006 FOXP1 JASPAR yes 70400007
chr6 90619991 90620012 IRF1 JASPAR yes 70400008
chr6 90619992 90620007 FOXP1 JASPAR yes 70400009
chr6 90619992 90620013 IRF1 JASPAR yes 70400010
chr6 90619993 90620008 FOXP1 JASPAR yes 70400011
chr6 90619994 90620009 FOXP1 JASPAR yes 70400012
chr6 90619996 90620017 IRF1 JASPAR yes 70400013
chr6 90619997 90620018 IRF1 JASPAR yes 70400014
chr6 90619998 90620019 IRF1 JASPAR yes 70400015
chr6 90620002 90620017 PRDM1 JASPAR yes 70400016
chr6 90620003 90620018 FOXP1 JASPAR yes 70400017
chr6 90620004 90620025 IRF1 JASPAR yes 70400018
chr6 90620004 90620025 ZNF263 JASPAR yes 70400019
chr6 90620005 90620010 ETS2 TRANSFAC yes 70400020
chr6 90620008 90620029 IRF1 JASPAR yes 70400021
chr6 90620012 90620033 IRF1 JASPAR yes 70400022
chr6 90620016 90620030 STAT1 JASPAR yes 70400023
chr6 90620016 90620031 PRDM1 JASPAR yes 70400024
chr6 90620025 90620033 HOXA5 JASPAR yes 70400025
chr6 90620039 90620045 SOX10 JASPAR yes 70400026
chr6 90620044 90620049 GATA2 JASPAR yes 70400027
chr6 90620048 90620058 GSC2 JASPAR yes 70400028
chr6 90620049 90620057 OTX2 JASPAR yes 70400029
chr6 90620082 90620100 IRF2 JASPAR yes 70400030
chr6 90620083 90620104 IRF1 JASPAR yes 70400031
chr6 90620085 90620100 STAT2 JASPAR yes 70400032
chr6 90620086 90620100 STAT1 JASPAR yes 70400033
chr6 90620087 90620099 IRF1 JASPAR yes 70400034
chr6 90620087 90620101 IRF7 JASPAR yes 70400035
chr6 90620087 90620101 IRF8 JASPAR yes 70400036
chr6 90620087 90620102 IRF9 JASPAR yes 70400037
chr6 90620091 90620106 STAT2 JASPAR yes 70400038
chr6 90620092 90620106 STAT1 JASPAR yes 70400039
chr6 90620100 90620104 YY1 TRANSFAC yes 70400040
chr6 90620126 90620141 HSF1 JASPAR yes 70400041
chr6 90620142 90620145 MYB TRANSFAC yes 70400042
chr6 90620151 90620154 MYB TRANSFAC yes 70400043
chr6 90620157 90620168 NFKB1 JASPAR yes 70400044
chr6 90620185 90620190 SP1 TRANSFAC yes 70400045
chr6 90620198 90620202 YY1 TRANSFAC yes 70400046
chr6 90620201 90620204 MYB TRANSFAC yes 70400047
chr6 90620204 90620210 TCF4 TRANSFAC yes 70400048
chr6 90620204 90620219 STAT1 JASPAR yes 70400049
chr6 90620206 90620217 STAT1 JASPAR yes 70400050
chr6 90620206 90620217 STAT3 JASPAR yes 70400051
chr6 90620211 90620216 ETS2 TRANSFAC yes 70400052
chr6 90620211 90620229 TP63 JASPAR yes 70400053
chr6 90620211 90620229 TP73 JASPAR yes 70400054
chr6 90620212 90620232 TP53 JASPAR yes 70400055
chr6 90620213 90620228 TP53 JASPAR yes 70400056
SNP sites on vista52744[chr6:90619987-90620233]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 90619989 rs559492583 TA T
FOXP1 IRF1 TBP
9184409
chr6 90619989 rs60781334 TA T
FOXP1 IRF1 TBP
9184410
chr6 90620083 rs370952584 TC T
IRF1 IRF2
9184411
Genes possibly regulated by vista52744[chr6:90619987-90620233]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 90352218 90529442 - MDN1 ENSG00000112159.7 90529442 0.69 0.99 6807 9455
chr6 90604188 90605839 + GJA10 ENSG00000135355.3 90604188 0.0 1.0 6808 84201
Expression level of Genes
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miRNAs possibly regulated by vista52744[chr6:90619987-90620233]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results