EnhancerDB
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  3. vista5276[chr1:223925260-223925580]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5276[chr1:223925260-223925580]
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Tissue distribution of vista5276
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Transcription factor that possibly regulate vista5276[chr1:223925260-223925580]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223925262 223925274 HES7 JASPAR yes 35674804
chr1 223925262 223925274 PKNOX1 JASPAR yes 35674805
chr1 223925262 223925274 PKNOX2 JASPAR yes 35674806
chr1 223925262 223925274 TGIF1 JASPAR yes 35674807
chr1 223925262 223925274 TGIF2 JASPAR yes 35674808
chr1 223925262 223925274 HES7 JASPAR yes 118466977
chr1 223925262 223925274 PKNOX1 JASPAR yes 118466978
chr1 223925262 223925274 PKNOX2 JASPAR yes 118466979
chr1 223925262 223925274 TGIF1 JASPAR yes 118466980
chr1 223925262 223925274 TGIF2 JASPAR yes 118466981
chr1 223925263 223925272 SNAI2 JASPAR yes 35674809
chr1 223925263 223925272 SNAI2 JASPAR yes 118466982
chr1 223925263 223925273 HEY2 JASPAR yes 35674810
chr1 223925263 223925273 ID4 JASPAR yes 35674811
chr1 223925263 223925273 TCF3 JASPAR yes 35674812
chr1 223925263 223925273 TCF4 JASPAR yes 35674813
chr1 223925263 223925273 HEY2 JASPAR yes 118466983
chr1 223925263 223925273 ID4 JASPAR yes 118466984
chr1 223925263 223925273 TCF3 JASPAR yes 118466985
chr1 223925263 223925273 TCF4 JASPAR yes 118466986
chr1 223925266 223925274 TBX15 JASPAR yes 35674814
chr1 223925266 223925274 TBX1 JASPAR yes 35674815
chr1 223925266 223925274 TBX4 JASPAR yes 35674816
chr1 223925266 223925274 TBX5 JASPAR yes 35674817
chr1 223925266 223925274 TBX15 JASPAR yes 118466987
chr1 223925266 223925274 TBX1 JASPAR yes 118466988
chr1 223925266 223925274 TBX4 JASPAR yes 118466989
chr1 223925266 223925274 TBX5 JASPAR yes 118466990
chr1 223925266 223925279 SMAD2 JASPAR yes 35674818
chr1 223925266 223925279 SMAD2 JASPAR yes 118466991
chr1 223925274 223925285 EBF1 JASPAR yes 35674819
chr1 223925274 223925285 EBF1 JASPAR yes 118466992
chr1 223925295 223925316 ZNF263 JASPAR yes 35674820
chr1 223925295 223925316 ZNF263 JASPAR yes 118466993
chr1 223925336 223925351 MAFK JASPAR yes 35674821
chr1 223925336 223925351 MAFK JASPAR yes 118466994
chr1 223925343 223925358 FOXA1 JASPAR yes 35674822
chr1 223925343 223925358 FOXA1 JASPAR yes 118466995
chr1 223925345 223925357 FOXC2 JASPAR yes 35674823
chr1 223925345 223925357 FOXC2 JASPAR yes 118466996
chr1 223925345 223925358 POU2F2 JASPAR yes 35674824
chr1 223925345 223925358 POU2F2 JASPAR yes 118466997
chr1 223925345 223925359 POU1F1 JASPAR yes 35674825
chr1 223925345 223925359 POU1F1 JASPAR yes 118466998
chr1 223925346 223925357 FOXB1 JASPAR yes 35674826
chr1 223925346 223925357 FOXC1 JASPAR yes 35674827
chr1 223925346 223925357 FOXB1 JASPAR yes 118466999
chr1 223925346 223925357 FOXC1 JASPAR yes 118467000
chr1 223925346 223925358 POU3F1 JASPAR yes 35674828
chr1 223925346 223925358 POU3F2 JASPAR yes 35674829
chr1 223925346 223925358 POU3F1 JASPAR yes 118467001
chr1 223925346 223925358 POU3F2 JASPAR yes 118467002
chr1 223925347 223925351 YY1 TRANSFAC yes 35674830
chr1 223925347 223925351 YY1 TRANSFAC yes 118467003
chr1 223925347 223925358 FOXA1 JASPAR yes 35674831
chr1 223925347 223925358 FOXA1 JASPAR yes 118467004
chr1 223925347 223925359 POU2F1 JASPAR yes 35674832
chr1 223925347 223925359 POU2F1 JASPAR yes 118467005
chr1 223925348 223925357 POU3F4 JASPAR yes 35674833
chr1 223925348 223925357 POU5F1B JASPAR yes 35674834
chr1 223925348 223925357 POU3F4 JASPAR yes 118467006
chr1 223925348 223925357 POU5F1B JASPAR yes 118467007
chr1 223925349 223925357 FOXL1 JASPAR yes 35674835
chr1 223925349 223925357 FOXL1 JASPAR yes 118467008
chr1 223925350 223925362 BHLHE23 JASPAR yes 35674836
chr1 223925350 223925362 BHLHE23 JASPAR yes 118467009
chr1 223925359 223925374 JUND JASPAR yes 35674837
chr1 223925359 223925374 JUND JASPAR yes 118467010
chr1 223925360 223925373 JUN JASPAR yes 35674838
chr1 223925360 223925373 JUN JASPAR yes 118467011
chr1 223925361 223925368 JUN TRANSFAC yes 35674839
chr1 223925361 223925368 JUN TRANSFAC yes 118467012
chr1 223925365 223925376 FOXH1 JASPAR yes 35674840
chr1 223925365 223925376 FOXH1 JASPAR yes 118467013
chr1 223925365 223925377 TEAD1 JASPAR yes 35674841
chr1 223925365 223925377 TEAD1 JASPAR yes 118467014
chr1 223925398 223925419 ZNF263 JASPAR yes 35674842
chr1 223925398 223925419 ZNF263 JASPAR yes 118467015
chr1 223925402 223925422 RREB1 JASPAR yes 35674843
chr1 223925402 223925422 RREB1 JASPAR yes 118467016
chr1 223925403 223925413 SP1 JASPAR yes 35674844
chr1 223925403 223925413 SP1 JASPAR yes 118467017
chr1 223925403 223925417 GLIS2 JASPAR yes 35674845
chr1 223925403 223925417 GLIS2 JASPAR yes 118467018
chr1 223925403 223925423 RREB1 JASPAR yes 35674846
chr1 223925403 223925423 RREB1 JASPAR yes 118467019
chr1 223925403 223925424 ZNF263 JASPAR yes 35674847
chr1 223925403 223925424 ZNF263 JASPAR yes 118467020
chr1 223925404 223925412 SP1 TRANSFAC yes 35674848
chr1 223925404 223925412 SP1 TRANSFAC yes 118467021
chr1 223925404 223925425 ZNF263 JASPAR yes 35674849
chr1 223925404 223925425 ZNF263 JASPAR yes 118467022
chr1 223925405 223925410 SP1 TRANSFAC yes 35674850
chr1 223925405 223925410 SP1 TRANSFAC yes 118467023
chr1 223925405 223925425 RREB1 JASPAR yes 35674851
chr1 223925405 223925425 RREB1 JASPAR yes 118467024
chr1 223925406 223925411 SP1 TRANSFAC yes 35674852
chr1 223925406 223925411 SP1 TRANSFAC yes 118467025
chr1 223925406 223925412 SP1 TRANSFAC yes 35674853
chr1 223925406 223925412 SP1 TRANSFAC yes 118467026
chr1 223925409 223925419 SP1 JASPAR yes 35674854
chr1 223925409 223925419 SP1 JASPAR yes 118467027
chr1 223925410 223925420 SP1 JASPAR yes 35674855
chr1 223925410 223925420 SP1 JASPAR yes 118467028
chr1 223925410 223925431 ZNF263 JASPAR yes 35674856
chr1 223925410 223925431 ZNF263 JASPAR yes 118467029
chr1 223925413 223925418 SP1 TRANSFAC yes 35674857
chr1 223925413 223925418 SP1 TRANSFAC yes 118467030
chr1 223925413 223925423 ZNF740 JASPAR yes 35674858
chr1 223925413 223925423 ZNF740 JASPAR yes 118467031
chr1 223925414 223925424 ZNF740 JASPAR yes 35674859
chr1 223925414 223925424 ZNF740 JASPAR yes 118467032
chr1 223925414 223925426 E2F8 JASPAR yes 35674860
chr1 223925414 223925426 E2F8 JASPAR yes 118467033
chr1 223925432 223925449 NR3C1 JASPAR yes 35674861
chr1 223925432 223925449 NR3C2 JASPAR yes 35674862
chr1 223925432 223925449 NR3C1 JASPAR yes 118467034
chr1 223925432 223925449 NR3C2 JASPAR yes 118467035
chr1 223925434 223925437 MYB TRANSFAC yes 35674863
chr1 223925434 223925437 MYB TRANSFAC yes 118467036
chr1 223925434 223925449 AR JASPAR yes 35674864
chr1 223925434 223925449 AR JASPAR yes 118467037
chr1 223925443 223925458 FOXP1 JASPAR yes 35674865
chr1 223925443 223925458 FOXP1 JASPAR yes 118467038
chr1 223925454 223925472 NR3C1 JASPAR yes 35674866
chr1 223925454 223925472 NR3C1 JASPAR yes 118467039
chr1 223925456 223925471 AR JASPAR yes 35674867
chr1 223925456 223925471 AR JASPAR yes 118467040
chr1 223925465 223925486 IRF1 JASPAR yes 35674868
chr1 223925465 223925486 IRF1 JASPAR yes 118467041
chr1 223925470 223925485 FOXP1 JASPAR yes 35674869
chr1 223925470 223925485 FOXP1 JASPAR yes 118467042
chr1 223925489 223925504 PRDM1 JASPAR yes 35674870
chr1 223925489 223925504 PRDM1 JASPAR yes 118467043
chr1 223925493 223925503 TEAD1 JASPAR yes 35674871
chr1 223925493 223925503 TEAD1 JASPAR yes 118467044
chr1 223925497 223925508 TBX2 JASPAR yes 35674872
chr1 223925497 223925508 TBX2 JASPAR yes 118467045
chr1 223925497 223925510 EOMES JASPAR yes 35674873
chr1 223925497 223925510 EOMES JASPAR yes 118467046
chr1 223925498 223925508 TBR1 JASPAR yes 35674874
chr1 223925498 223925508 TBR1 JASPAR yes 118467047
chr1 223925511 223925521 SP1 JASPAR yes 35674875
chr1 223925511 223925521 SP1 JASPAR yes 118467048
chr1 223925511 223925532 ZNF263 JASPAR yes 35674876
chr1 223925511 223925532 ZNF263 JASPAR yes 118467049
chr1 223925515 223925536 IRF1 JASPAR yes 35674877
chr1 223925515 223925536 IRF1 JASPAR yes 118467050
chr1 223925571 223925590 REST JASPAR yes 35674878
chr1 223925571 223925590 REST JASPAR yes 118467051
chr1 223925576 223925583 NKX3-1 JASPAR yes 35674879
chr1 223925576 223925583 NKX3-1 JASPAR yes 118467052
SNP sites on vista5276[chr1:223925260-223925580]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 223925330 rs142525084 T A,G no 978513
chr1 223925511 rs113108724 C CTGGAGAG
SP1 ZNF263
978514
Genes possibly regulated by vista5276[chr1:223925260-223925580]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223711349 223853436 - CAPN8 ENSG00000203697.7 223853436 0.92 0.99 1874 28176
chr1 223889295 223963720 + CAPN2 ENSG00000162909.13 223889295 0.77 1.0 1875 64035
Expression level of Genes
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miRNAs possibly regulated by vista5276[chr1:223925260-223925580]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results