EnhancerDB
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  3. vista5277[chr1:223964690-223965055]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5277[chr1:223964690-223965055]
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Tissue distribution of vista5277
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Transcription factor that possibly regulate vista5277[chr1:223964690-223965055]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 223964692 223964702 SP1 JASPAR yes 35676944
chr1 223964692 223964702 SP1 JASPAR yes 118467053
chr1 223964693 223964713 RREB1 JASPAR yes 35676945
chr1 223964693 223964713 RREB1 JASPAR yes 118467054
chr1 223964697 223964706 SP1 TRANSFAC yes 35676946
chr1 223964697 223964706 SP1 TRANSFAC yes 118467055
chr1 223964697 223964717 RREB1 JASPAR yes 35676947
chr1 223964697 223964717 RREB1 JASPAR yes 118467056
chr1 223964698 223964704 SP1 TRANSFAC yes 35676948
chr1 223964698 223964704 SP1 TRANSFAC yes 118467057
chr1 223964698 223964708 SP1 JASPAR yes 35676949
chr1 223964698 223964708 SP1 JASPAR yes 118467058
chr1 223964699 223964706 SP1 TRANSFAC yes 35676950
chr1 223964699 223964706 SP1 TRANSFAC yes 118467059
chr1 223964700 223964705 SP1 TRANSFAC yes 35676951
chr1 223964700 223964705 SP1 TRANSFAC yes 118467060
chr1 223964700 223964706 SP1 TRANSFAC yes 35676952
chr1 223964700 223964706 SP1 TRANSFAC yes 118467061
chr1 223964700 223964707 SP1 TRANSFAC yes 35676953
chr1 223964700 223964707 SP1 TRANSFAC yes 118467062
chr1 223964702 223964712 ZNF740 JASPAR yes 35676954
chr1 223964702 223964712 ZNF740 JASPAR yes 118467063
chr1 223964702 223964716 GLIS2 JASPAR yes 35676955
chr1 223964702 223964716 ZIC1 JASPAR yes 35676956
chr1 223964702 223964716 GLIS2 JASPAR yes 118467064
chr1 223964702 223964716 ZIC1 JASPAR yes 118467065
chr1 223964702 223964717 ZIC3 JASPAR yes 35676957
chr1 223964702 223964717 ZIC4 JASPAR yes 35676958
chr1 223964702 223964717 ZIC3 JASPAR yes 118467066
chr1 223964702 223964717 ZIC4 JASPAR yes 118467067
chr1 223964703 223964713 SP1 JASPAR yes 35676959
chr1 223964703 223964713 SP1 JASPAR yes 118467068
chr1 223964704 223964724 RREB1 JASPAR yes 35676960
chr1 223964704 223964724 RREB1 JASPAR yes 118467069
chr1 223964706 223964712 SP1 TRANSFAC yes 35676961
chr1 223964706 223964712 SP1 TRANSFAC yes 118467070
chr1 223964706 223964716 SP1 JASPAR yes 35676962
chr1 223964706 223964716 SP1 JASPAR yes 118467071
chr1 223964707 223964727 RREB1 JASPAR yes 35676963
chr1 223964707 223964727 RREB1 JASPAR yes 118467072
chr1 223964720 223964741 ZNF263 JASPAR yes 35676964
chr1 223964720 223964741 ZNF263 JASPAR yes 118467073
chr1 223964732 223964743 E2F6 JASPAR yes 35676965
chr1 223964732 223964743 E2F6 JASPAR yes 118467074
chr1 223964792 223964796 NFE TRANSFAC yes 35676966
chr1 223964792 223964796 NFE TRANSFAC yes 118467075
chr1 223964794 223964804 ESX1 JASPAR yes 35676967
chr1 223964794 223964804 GBX2 JASPAR yes 35676968
chr1 223964794 223964804 HESX1 JASPAR yes 35676969
chr1 223964794 223964804 LBX2 JASPAR yes 35676970
chr1 223964794 223964804 MIXL1 JASPAR yes 35676971
chr1 223964794 223964804 RAX JASPAR yes 35676972
chr1 223964794 223964804 ESX1 JASPAR yes 118467076
chr1 223964794 223964804 GBX2 JASPAR yes 118467077
chr1 223964794 223964804 HESX1 JASPAR yes 118467078
chr1 223964794 223964804 LBX2 JASPAR yes 118467079
chr1 223964794 223964804 MIXL1 JASPAR yes 118467080
chr1 223964794 223964804 RAX JASPAR yes 118467081
chr1 223964795 223964803 ISX JASPAR yes 35676973
chr1 223964795 223964803 LHX9 JASPAR yes 35676974
chr1 223964795 223964803 LMX1B JASPAR yes 35676975
chr1 223964795 223964803 PRRX1 JASPAR yes 35676976
chr1 223964795 223964803 RAX2 JASPAR yes 35676977
chr1 223964795 223964803 SHOX JASPAR yes 35676978
chr1 223964795 223964803 UNCX JASPAR yes 35676979
chr1 223964795 223964803 ISX JASPAR yes 118467082
chr1 223964795 223964803 LHX9 JASPAR yes 118467083
chr1 223964795 223964803 LMX1B JASPAR yes 118467084
chr1 223964795 223964803 PRRX1 JASPAR yes 118467085
chr1 223964795 223964803 RAX2 JASPAR yes 118467086
chr1 223964795 223964803 SHOX JASPAR yes 118467087
chr1 223964795 223964803 UNCX JASPAR yes 118467088
chr1 223964800 223964803 MYB TRANSFAC yes 35676980
chr1 223964800 223964803 MYB TRANSFAC yes 118467089
chr1 223964803 223964818 PRDM1 JASPAR yes 35676981
chr1 223964803 223964818 PRDM1 JASPAR yes 118467090
chr1 223964803 223964824 IRF1 JASPAR yes 35676982
chr1 223964803 223964824 IRF1 JASPAR yes 118467091
chr1 223964804 223964825 ZNF263 JASPAR yes 35676983
chr1 223964804 223964825 ZNF263 JASPAR yes 118467092
chr1 223964806 223964827 ZNF263 JASPAR yes 35676984
chr1 223964806 223964827 ZNF263 JASPAR yes 118467093
chr1 223964807 223964822 PRDM1 JASPAR yes 35676985
chr1 223964807 223964822 PRDM1 JASPAR yes 118467094
chr1 223964807 223964828 ZNF263 JASPAR yes 35676986
chr1 223964807 223964828 ZNF263 JASPAR yes 118467095
chr1 223964809 223964830 IRF1 JASPAR yes 35676987
chr1 223964809 223964830 IRF1 JASPAR yes 118467096
chr1 223964811 223964826 PRDM1 JASPAR yes 35676988
chr1 223964811 223964826 PRDM1 JASPAR yes 118467097
chr1 223964811 223964832 ZNF263 JASPAR yes 35676989
chr1 223964811 223964832 ZNF263 JASPAR yes 118467098
chr1 223964812 223964833 ZNF263 JASPAR yes 35676990
chr1 223964812 223964833 ZNF263 JASPAR yes 118467099
chr1 223964817 223964838 ZNF263 JASPAR yes 35676991
chr1 223964817 223964838 ZNF263 JASPAR yes 118467100
chr1 223964823 223964844 ZNF263 JASPAR yes 35676992
chr1 223964823 223964844 ZNF263 JASPAR yes 118467101
chr1 223964828 223964849 IRF1 JASPAR yes 35676993
chr1 223964828 223964849 IRF1 JASPAR yes 118467102
chr1 223964829 223964844 FOXP1 JASPAR yes 35676994
chr1 223964829 223964844 FOXP1 JASPAR yes 118467103
chr1 223964830 223964845 STAT2 JASPAR yes 35676995
chr1 223964830 223964845 STAT2 JASPAR yes 118467104
chr1 223964835 223964856 ZNF263 JASPAR yes 35676996
chr1 223964835 223964856 ZNF263 JASPAR yes 118467105
chr1 223964838 223964859 ZNF263 JASPAR yes 35676997
chr1 223964838 223964859 ZNF263 JASPAR yes 118467106
chr1 223964844 223964854 MSC JASPAR yes 35676998
chr1 223964844 223964854 MSC JASPAR yes 118467107
chr1 223964863 223964874 FOXB1 JASPAR yes 35676999
chr1 223964863 223964874 FOXC1 JASPAR yes 35677000
chr1 223964863 223964874 FOXB1 JASPAR yes 118467108
chr1 223964863 223964874 FOXC1 JASPAR yes 118467109
chr1 223964863 223964875 FOXC2 JASPAR yes 35677001
chr1 223964863 223964875 FOXC2 JASPAR yes 118467110
chr1 223964864 223964875 FOXP2 JASPAR yes 35677002
chr1 223964864 223964875 FOXP2 JASPAR yes 118467111
chr1 223964865 223964873 FOXO3 JASPAR yes 35677003
chr1 223964865 223964873 FOXO3 JASPAR yes 118467112
chr1 223964866 223964873 FOXD2 JASPAR yes 35677004
chr1 223964866 223964873 FOXI1 JASPAR yes 35677005
chr1 223964866 223964873 FOXL1 JASPAR yes 35677006
chr1 223964866 223964873 FOXO4 JASPAR yes 35677007
chr1 223964866 223964873 FOXO6 JASPAR yes 35677008
chr1 223964866 223964873 FOXP3 JASPAR yes 35677009
chr1 223964866 223964873 FOXD2 JASPAR yes 118467113
chr1 223964866 223964873 FOXI1 JASPAR yes 118467114
chr1 223964866 223964873 FOXL1 JASPAR yes 118467115
chr1 223964866 223964873 FOXO4 JASPAR yes 118467116
chr1 223964866 223964873 FOXO6 JASPAR yes 118467117
chr1 223964866 223964873 FOXP3 JASPAR yes 118467118
chr1 223964866 223964874 FOXD1 JASPAR yes 35677010
chr1 223964866 223964874 FOXG1 JASPAR yes 35677011
chr1 223964866 223964874 FOXO3 JASPAR yes 35677012
chr1 223964866 223964874 FOXD1 JASPAR yes 118467119
chr1 223964866 223964874 FOXG1 JASPAR yes 118467120
chr1 223964866 223964874 FOXO3 JASPAR yes 118467121
chr1 223964867 223964875 FOXL1 JASPAR yes 35677013
chr1 223964867 223964875 FOXL1 JASPAR yes 118467122
chr1 223964872 223964887 MEF2A JASPAR yes 35677014
chr1 223964872 223964887 MEF2A JASPAR yes 118467123
chr1 223964873 223964884 FOXB1 JASPAR yes 35677015
chr1 223964873 223964884 FOXC1 JASPAR yes 35677016
chr1 223964873 223964884 FOXB1 JASPAR yes 118467124
chr1 223964873 223964884 FOXC1 JASPAR yes 118467125
chr1 223964873 223964885 MEF2A JASPAR yes 35677017
chr1 223964873 223964885 MEF2B JASPAR yes 35677018
chr1 223964873 223964885 MEF2D JASPAR yes 35677019
chr1 223964873 223964885 MEF2A JASPAR yes 118467126
chr1 223964873 223964885 MEF2B JASPAR yes 118467127
chr1 223964873 223964885 MEF2D JASPAR yes 118467128
chr1 223964874 223964886 FOXI1 JASPAR yes 35677020
chr1 223964874 223964886 FOXI1 JASPAR yes 118467129
chr1 223964875 223964879 TEAD2 TRANSFAC yes 35677021
chr1 223964875 223964879 TEAD2 TRANSFAC yes 118467130
chr1 223964875 223964880 TBP TRANSFAC yes 35677022
chr1 223964875 223964880 TBP TRANSFAC yes 118467131
chr1 223964875 223964881 TMF TRANSFAC yes 35677023
chr1 223964875 223964881 TMF TRANSFAC yes 118467132
chr1 223964917 223964931 ZIC1 JASPAR yes 35677024
chr1 223964917 223964931 ZIC1 JASPAR yes 118467133
chr1 223964917 223964932 ZIC3 JASPAR yes 35677025
chr1 223964917 223964932 ZIC3 JASPAR yes 118467134
chr1 223964937 223964945 EHF JASPAR yes 35677026
chr1 223964937 223964945 EHF JASPAR yes 118467135
chr1 223964958 223964969 ELK4 JASPAR yes 35677027
chr1 223964958 223964969 ELK4 JASPAR yes 118467136
chr1 223964959 223964969 ELK1 JASPAR yes 35677028
chr1 223964959 223964969 ELK3 JASPAR yes 35677029
chr1 223964959 223964969 ERG JASPAR yes 35677030
chr1 223964959 223964969 ETV1 JASPAR yes 35677031
chr1 223964959 223964969 ETV4 JASPAR yes 35677032
chr1 223964959 223964969 ETV5 JASPAR yes 35677033
chr1 223964959 223964969 FEV JASPAR yes 35677034
chr1 223964959 223964969 FLI1 JASPAR yes 35677035
chr1 223964959 223964969 ELK1 JASPAR yes 118467137
chr1 223964959 223964969 ELK3 JASPAR yes 118467138
chr1 223964959 223964969 ERG JASPAR yes 118467139
chr1 223964959 223964969 ETV1 JASPAR yes 118467140
chr1 223964959 223964969 ETV4 JASPAR yes 118467141
chr1 223964959 223964969 ETV5 JASPAR yes 118467142
chr1 223964959 223964969 FEV JASPAR yes 118467143
chr1 223964959 223964969 FLI1 JASPAR yes 118467144
chr1 223964960 223964969 ELK4 JASPAR yes 35677036
chr1 223964960 223964969 ELK4 JASPAR yes 118467145
chr1 223964961 223964967 ETS1 JASPAR yes 35677037
chr1 223964961 223964967 SPI1 JASPAR yes 35677038
chr1 223964961 223964967 ETS1 JASPAR yes 118467146
chr1 223964961 223964967 SPI1 JASPAR yes 118467147
chr1 223964973 223964977 NFE TRANSFAC yes 35677039
chr1 223964973 223964977 NFE TRANSFAC yes 118467148
chr1 223964995 223964999 YY1 TRANSFAC yes 35677040
chr1 223964995 223964999 YY1 TRANSFAC yes 118467149
chr1 223964996 223965006 NFATC3 JASPAR yes 35677041
chr1 223964996 223965006 NFATC3 JASPAR yes 118467150
chr1 223964997 223965004 NFATC2 JASPAR yes 35677042
chr1 223964997 223965004 NFATC2 JASPAR yes 118467151
chr1 223965028 223965047 REST JASPAR yes 35677043
chr1 223965028 223965047 REST JASPAR yes 118467152
chr1 223965035 223965041 TCF4 TRANSFAC yes 35677044
chr1 223965035 223965041 TCF4 TRANSFAC yes 118467153
chr1 223965047 223965057 HOXA13 JASPAR yes 35677045
chr1 223965047 223965057 HOXC10 JASPAR yes 35677046
chr1 223965047 223965057 HOXD11 JASPAR yes 35677047
chr1 223965047 223965057 HOXA13 JASPAR yes 118467154
chr1 223965047 223965057 HOXC10 JASPAR yes 118467155
chr1 223965047 223965057 HOXD11 JASPAR yes 118467156
chr1 223965047 223965058 HOXA10 JASPAR yes 35677048
chr1 223965047 223965058 HOXC11 JASPAR yes 35677049
chr1 223965047 223965058 HOXC12 JASPAR yes 35677050
chr1 223965047 223965058 HOXC13 JASPAR yes 35677051
chr1 223965047 223965058 HOXD12 JASPAR yes 35677052
chr1 223965047 223965058 HOXA10 JASPAR yes 118467157
chr1 223965047 223965058 HOXC11 JASPAR yes 118467158
chr1 223965047 223965058 HOXC12 JASPAR yes 118467159
chr1 223965047 223965058 HOXC13 JASPAR yes 118467160
chr1 223965047 223965058 HOXD12 JASPAR yes 118467161
chr1 223965048 223965057 CDX1 JASPAR yes 35677053
chr1 223965048 223965057 CDX1 JASPAR yes 118467162
chr1 223965048 223965059 CDX2 JASPAR yes 35677054
chr1 223965048 223965059 CDX2 JASPAR yes 118467163
SNP sites on vista5277[chr1:223964690-223965055]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 223964697 rs1621129 C A
RREB1 SP1
978722
chr1 223964704 rs146328664 C A
GLIS2 RREB1 SP1 ZIC1 ZIC3 ZIC4 ZNF740
978723
chr1 223964708 rs7518720 C A,G,T
GLIS2 RREB1 SP1 ZIC1 ZIC3 ZIC4 ZNF740
978724
chr1 223964810 rs60956486 T C
IRF1 PRDM1 ZNF263
978725
chr1 223964821 rs372239418 CTT C
IRF1 PRDM1 ZNF263
978726
chr1 223964916 rs560543384 T C no 978727
chr1 223964940 rs567652095 T C
EHF
978728
chr1 223965031 rs12040633 C T
REST
978729
Genes possibly regulated by vista5277[chr1:223964690-223965055]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 223889295 223963720 + CAPN2 ENSG00000162909.13 223889295 0.77 1.0 1875 24605
chr1 223967601 224033674 - TP53BP2 ENSG00000143514.12 224033674 0.78 1.0 1876 31381
Expression level of Genes
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miRNAs possibly regulated by vista5277[chr1:223964690-223965055]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results