EnhancerDB
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  3. vista5287[chr1:224180261-224180516]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5287[chr1:224180261-224180516]
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Tissue distribution of vista5287
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Transcription factor that possibly regulate vista5287[chr1:224180261-224180516]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 224179461 224180669 POLR2A UCSC Txn Factor no Conserved 107873267
chr1 224180179 224180483 ATF3 UCSC Txn Factor no Conserved 107873295
chr1 224180252 224180440 ATF1 UCSC Txn Factor no Conserved 107873329
chr1 224180258 224180420 BRCA1 UCSC Txn Factor no Conserved 107873332
chr1 224180254 224180268 PLAG1 JASPAR yes 35682219
chr1 224180254 224180268 PLAG1 JASPAR yes 118467766
chr1 224180269 224180280 NFE2L2 JASPAR yes 35682220
chr1 224180269 224180280 NFE2L2 JASPAR yes 118467767
chr1 224180292 224180306 CREB3 JASPAR yes 35682221
chr1 224180292 224180306 CREB3 JASPAR yes 118467768
chr1 224180293 224180307 XBP1 JASPAR yes 35682222
chr1 224180293 224180307 XBP1 JASPAR yes 118467769
chr1 224180295 224180300 ATF1 TRANSFAC yes 35682223
chr1 224180295 224180300 ATF1 TRANSFAC yes 118467770
chr1 224180336 224180341 SP1 TRANSFAC yes 35682224
chr1 224180336 224180341 SP1 TRANSFAC yes 118467771
chr1 224180341 224180354 JUN JASPAR yes 35682225
chr1 224180341 224180354 JUN JASPAR yes 118467772
chr1 224180342 224180356 ATF7 JASPAR yes 35682226
chr1 224180342 224180356 BATF3 JASPAR yes 35682227
chr1 224180342 224180356 CREB3 JASPAR yes 35682228
chr1 224180342 224180356 ATF7 JASPAR yes 118467773
chr1 224180342 224180356 BATF3 JASPAR yes 118467774
chr1 224180342 224180356 CREB3 JASPAR yes 118467775
chr1 224180343 224180355 JDP2 JASPAR yes 35682229
chr1 224180343 224180355 JDP2 JASPAR yes 118467776
chr1 224180343 224180358 JUND JASPAR yes 35682230
chr1 224180343 224180358 JUND JASPAR yes 118467777
chr1 224180344 224180357 JUN JASPAR yes 35682231
chr1 224180344 224180357 JUN JASPAR yes 118467778
chr1 224180345 224180350 ATF1 TRANSFAC yes 35682232
chr1 224180345 224180350 ATF1 TRANSFAC yes 118467779
chr1 224180345 224180353 CREB1 JASPAR yes 35682233
chr1 224180345 224180353 CREB1 JASPAR yes 118467780
chr1 224180346 224180358 CREB1 JASPAR yes 35682234
chr1 224180346 224180358 CREB1 JASPAR yes 118467781
chr1 224180347 224180352 ATF1 TRANSFAC yes 35682235
chr1 224180347 224180352 ATF1 TRANSFAC yes 118467782
chr1 224180353 224180359 ETS1 JASPAR yes 35682236
chr1 224180353 224180359 SPI1 JASPAR yes 35682237
chr1 224180353 224180359 ETS1 JASPAR yes 118467783
chr1 224180353 224180359 SPI1 JASPAR yes 118467784
chr1 224180367 224180381 ATF7 JASPAR yes 35682238
chr1 224180367 224180381 CREB3 JASPAR yes 35682239
chr1 224180367 224180381 ATF7 JASPAR yes 118467785
chr1 224180367 224180381 CREB3 JASPAR yes 118467786
chr1 224180370 224180375 ATF1 TRANSFAC yes 35682240
chr1 224180370 224180375 ATF1 TRANSFAC yes 118467787
chr1 224180395 224180410 NFYB JASPAR yes 35682241
chr1 224180395 224180410 NFYB JASPAR yes 118467788
chr1 224180397 224180413 NFYA JASPAR yes 35682242
chr1 224180397 224180413 NFYA JASPAR yes 118467789
chr1 224180398 224180416 NFYA JASPAR yes 35682243
chr1 224180398 224180416 NFYA JASPAR yes 118467790
chr1 224180402 224180406 H1TF2 TRANSFAC yes 35682244
chr1 224180402 224180406 NFE TRANSFAC yes 35682245
chr1 224180402 224180406 SRF TRANSFAC yes 35682246
chr1 224180402 224180406 H1TF2 TRANSFAC yes 118467791
chr1 224180402 224180406 NFE TRANSFAC yes 118467792
chr1 224180402 224180406 SRF TRANSFAC yes 118467793
chr1 224180417 224180422 SP1 TRANSFAC yes 35682247
chr1 224180417 224180422 SP1 TRANSFAC yes 118467794
chr1 224180450 224180462 HINFP JASPAR yes 35682248
chr1 224180450 224180462 HINFP JASPAR yes 118467795
chr1 224180460 224180475 ZIC4 JASPAR yes 35682249
chr1 224180460 224180475 ZIC4 JASPAR yes 118467796
chr1 224180475 224180480 SP1 TRANSFAC yes 35682250
chr1 224180475 224180480 SP1 TRANSFAC yes 118467797
chr1 224180476 224180481 SP1 TRANSFAC yes 35682251
chr1 224180476 224180481 SP1 TRANSFAC yes 118467798
chr1 224180485 224180488 MYB TRANSFAC yes 35682252
chr1 224180485 224180488 MYB TRANSFAC yes 118467799
SNP sites on vista5287[chr1:224180261-224180516]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 224180351 rs11800372 T C
ATF1 ATF3 ATF7 BATF3 BRCA1 CREB1 CREB3 JDP2 JUN JUND POLR2A
979316
chr1 224180373 rs556833476 A G
ATF1 ATF3 ATF7 BRCA1 CREB3 POLR2A
979317
chr1 224180377 rs138562231 C T
ATF1 ATF3 ATF7 BRCA1 CREB3 POLR2A
979318
chr1 224180378 rs144135113 G A,T
ATF1 ATF3 ATF7 BRCA1 CREB3 POLR2A
979319
chr1 224180416 rs189960325 G C
ATF1 ATF3 BRCA1 NFYA POLR2A
979320
chr1 224180458 rs540290920 C G
ATF3 HINFP POLR2A
979321
chr1 224180489 rs11799363 C T
POLR2A
979322
Genes possibly regulated by vista5287[chr1:224180261-224180516]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 224215760 224216371 - AC138393.1 ENSG00000269358.1 224216371 1.0 1.0 1877 64145
Expression level of Genes
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miRNAs possibly regulated by vista5287[chr1:224180261-224180516]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results