EnhancerDB
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  3. vista5290[chr1:224269875-224270192]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5290[chr1:224269875-224270192]
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Tissue distribution of vista5290
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Transcription factor that possibly regulate vista5290[chr1:224269875-224270192]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 224269871 224269891 TP53 JASPAR yes 35687267
chr1 224269871 224269891 TP53 JASPAR yes 118467856
chr1 224269902 224269912 HOXA13 JASPAR yes 35687268
chr1 224269902 224269912 HOXB13 JASPAR yes 35687269
chr1 224269902 224269912 HOXD13 JASPAR yes 35687270
chr1 224269902 224269912 HOXA13 JASPAR yes 118467857
chr1 224269902 224269912 HOXB13 JASPAR yes 118467858
chr1 224269902 224269912 HOXD13 JASPAR yes 118467859
chr1 224269902 224269913 HOXA10 JASPAR yes 35687271
chr1 224269902 224269913 HOXA10 JASPAR yes 118467860
chr1 224269903 224269912 CDX1 JASPAR yes 35687272
chr1 224269903 224269912 CDX1 JASPAR yes 118467861
chr1 224269903 224269914 CDX2 JASPAR yes 35687273
chr1 224269903 224269914 CDX2 JASPAR yes 118467862
chr1 224269917 224269921 YY1 TRANSFAC yes 35687274
chr1 224269917 224269921 YY1 TRANSFAC yes 118467863
chr1 224269933 224269946 DUXA JASPAR yes 35687275
chr1 224269933 224269946 DUXA JASPAR yes 118467864
chr1 224269934 224269937 MYB TRANSFAC yes 35687276
chr1 224269934 224269937 MYB TRANSFAC yes 118467865
chr1 224269934 224269945 DUX4 JASPAR yes 35687277
chr1 224269934 224269945 DUX4 JASPAR yes 118467866
chr1 224269937 224269948 FOSL2 JASPAR yes 35687278
chr1 224269937 224269948 JUNB JASPAR yes 35687279
chr1 224269937 224269948 FOSL2 JASPAR yes 118467867
chr1 224269937 224269948 JUNB JASPAR yes 118467868
chr1 224269938 224269944 JUN TRANSFAC yes 35687280
chr1 224269938 224269944 JUN TRANSFAC yes 118467869
chr1 224269947 224269951 ESR1 TRANSFAC yes 35687281
chr1 224269947 224269951 ESR1 TRANSFAC yes 118467870
chr1 224269947 224269958 USF1 JASPAR yes 35687282
chr1 224269947 224269958 USF1 JASPAR yes 118467871
chr1 224269948 224269958 SREBF2 JASPAR yes 35687283
chr1 224269948 224269958 TFE3 JASPAR yes 35687284
chr1 224269948 224269958 TFEB JASPAR yes 35687285
chr1 224269948 224269958 TFEC JASPAR yes 35687286
chr1 224269948 224269958 SREBF2 JASPAR yes 118467872
chr1 224269948 224269958 TFE3 JASPAR yes 118467873
chr1 224269948 224269958 TFEB JASPAR yes 118467874
chr1 224269948 224269958 TFEC JASPAR yes 118467875
chr1 224269948 224269959 USF1 JASPAR yes 35687287
chr1 224269948 224269959 USF2 JASPAR yes 35687288
chr1 224269948 224269959 USF1 JASPAR yes 118467876
chr1 224269948 224269959 USF2 JASPAR yes 118467877
chr1 224269953 224269963 SREBF1 JASPAR yes 35687289
chr1 224269953 224269963 SREBF2 JASPAR yes 35687290
chr1 224269953 224269963 SREBF1 JASPAR yes 118467878
chr1 224269953 224269963 SREBF2 JASPAR yes 118467879
chr1 224269954 224269965 PHOX2A JASPAR yes 35687291
chr1 224269954 224269965 PHOX2A JASPAR yes 118467880
chr1 224269971 224269992 ZNF263 JASPAR yes 35687292
chr1 224269971 224269992 ZNF263 JASPAR yes 118467881
chr1 224269974 224269993 PAX5 JASPAR yes 35687293
chr1 224269974 224269993 PAX5 JASPAR yes 118467882
chr1 224269987 224270001 EBF1 JASPAR yes 35687294
chr1 224269987 224270001 EBF1 JASPAR yes 118467883
chr1 224269998 224270013 MAFK JASPAR yes 35687295
chr1 224269998 224270013 MAFK JASPAR yes 118467884
chr1 224270020 224270024 TEAD2 TRANSFAC yes 35687296
chr1 224270020 224270024 TEAD2 TRANSFAC yes 118467885
chr1 224270028 224270038 HESX1 JASPAR yes 35687297
chr1 224270028 224270038 HESX1 JASPAR yes 118467886
chr1 224270029 224270037 DLX6 JASPAR yes 35687298
chr1 224270029 224270037 MSX2 JASPAR yes 35687299
chr1 224270029 224270037 DLX6 JASPAR yes 118467887
chr1 224270029 224270037 MSX2 JASPAR yes 118467888
chr1 224270051 224270055 H1TF2 TRANSFAC yes 35687300
chr1 224270051 224270055 NFE TRANSFAC yes 35687301
chr1 224270051 224270055 SRF TRANSFAC yes 35687302
chr1 224270051 224270055 H1TF2 TRANSFAC yes 118467889
chr1 224270051 224270055 NFE TRANSFAC yes 118467890
chr1 224270051 224270055 SRF TRANSFAC yes 118467891
chr1 224270085 224270096 NFE2 JASPAR yes 35687303
chr1 224270085 224270096 NFE2 JASPAR yes 118467892
chr1 224270089 224270104 JUND JASPAR yes 35687304
chr1 224270089 224270104 JUND JASPAR yes 118467893
chr1 224270094 224270104 HOXA2 JASPAR yes 35687305
chr1 224270094 224270104 NOTO JASPAR yes 35687306
chr1 224270094 224270104 HOXA2 JASPAR yes 118467894
chr1 224270094 224270104 NOTO JASPAR yes 118467895
chr1 224270095 224270109 POU1F1 JASPAR yes 35687307
chr1 224270095 224270109 POU1F1 JASPAR yes 118467896
chr1 224270096 224270108 POU3F1 JASPAR yes 35687308
chr1 224270096 224270108 POU3F2 JASPAR yes 35687309
chr1 224270096 224270108 POU3F1 JASPAR yes 118467897
chr1 224270096 224270108 POU3F2 JASPAR yes 118467898
chr1 224270096 224270109 POU3F3 JASPAR yes 35687310
chr1 224270096 224270109 POU3F3 JASPAR yes 118467899
chr1 224270097 224270101 YY1 TRANSFAC yes 35687311
chr1 224270097 224270101 YY1 TRANSFAC yes 118467900
chr1 224270097 224270109 POU2F1 JASPAR yes 35687312
chr1 224270097 224270109 POU2F1 JASPAR yes 118467901
chr1 224270098 224270107 POU3F4 JASPAR yes 35687313
chr1 224270098 224270107 POU5F1B JASPAR yes 35687314
chr1 224270098 224270107 POU3F4 JASPAR yes 118467902
chr1 224270098 224270107 POU5F1B JASPAR yes 118467903
chr1 224270112 224270120 TBX5 JASPAR yes 35687315
chr1 224270112 224270120 TBX5 JASPAR yes 118467904
chr1 224270114 224270128 PLAG1 JASPAR yes 35687316
chr1 224270114 224270128 PLAG1 JASPAR yes 118467905
chr1 224270124 224270129 SP1 TRANSFAC yes 35687317
chr1 224270124 224270129 SP1 TRANSFAC yes 118467906
chr1 224270133 224270144 FOS JASPAR yes 35687318
chr1 224270133 224270144 FOS JASPAR yes 118467907
chr1 224270135 224270141 JUN TRANSFAC yes 35687319
chr1 224270135 224270141 JUN TRANSFAC yes 118467908
chr1 224270139 224270142 MYB TRANSFAC yes 35687320
chr1 224270139 224270142 MYB TRANSFAC yes 118467909
chr1 224270141 224270147 SOX10 JASPAR yes 35687321
chr1 224270141 224270147 SOX10 JASPAR yes 118467910
chr1 224270147 224270155 TEAD3 JASPAR yes 35687322
chr1 224270147 224270155 TEAD3 JASPAR yes 118467911
chr1 224270161 224270169 FEV JASPAR yes 35687323
chr1 224270161 224270169 FEV JASPAR yes 118467912
chr1 224270162 224270173 NFKB1 JASPAR yes 35687324
chr1 224270162 224270173 NFKB1 JASPAR yes 118467913
chr1 224270163 224270173 RELA JASPAR yes 35687325
chr1 224270163 224270173 REL JASPAR yes 35687326
chr1 224270163 224270173 RELA JASPAR yes 118467914
chr1 224270163 224270173 REL JASPAR yes 118467915
SNP sites on vista5290[chr1:224269875-224270192]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 224270091 rs111553777 G GT
JUND NFE2
979770
chr1 224270107 rs7548255 G A
POU1F1 POU2F1 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
979771
chr1 224270130 rs549655892 C T no 979772
chr1 224270154 rs7540879 C T
TEAD3
979773
Genes possibly regulated by vista5290[chr1:224269875-224270192]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 224215760 224216371 - AC138393.1 ENSG00000269358.1 224216371 1.0 1.0 1877 46496
chr1 224301789 224349749 + FBXO28 ENSG00000143756.7 224301789 0.63 0.99 1878 68403
chr1 224363458 224381143 + DEGS1 ENSG00000143753.8 224363458 0.72 0.98 1879 6734
Expression level of Genes
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miRNAs possibly regulated by vista5290[chr1:224269875-224270192]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results