EnhancerDB
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  3. vista52911[chr6:105388915-105389637]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52911[chr6:105388915-105389637]
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Tissue distribution of vista52911
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Transcription factor that possibly regulate vista52911[chr6:105388915-105389637]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 105389050 105389311 ELF1 UCSC Txn Factor no Conserved 108541078
chr6 105389290 105389879 CTCF UCSC Txn Factor no Conserved 108541079
chr6 105389348 105389611 RAD21 UCSC Txn Factor no Conserved 108541080
chr6 105388936 105388946 GCM2 JASPAR yes 70407378
chr6 105388936 105388947 GCM1 JASPAR yes 70407379
chr6 105388943 105388955 HINFP JASPAR yes 70407380
chr6 105388960 105388964 H4TF2 TRANSFAC yes 70407381
chr6 105388966 105388979 SMAD2 JASPAR yes 70407382
chr6 105388972 105388982 BHLHE40 JASPAR yes 70407383
chr6 105388972 105388982 BHLHE41 JASPAR yes 70407384
chr6 105388972 105388982 HEY1 JASPAR yes 70407385
chr6 105388972 105388982 MLX JASPAR yes 70407386
chr6 105388972 105388982 TFE3 JASPAR yes 70407387
chr6 105388972 105388982 TFEB JASPAR yes 70407388
chr6 105388972 105388982 TFEC JASPAR yes 70407389
chr6 105388972 105388983 USF2 JASPAR yes 70407390
chr6 105388974 105388979 MYC TRANSFAC yes 70407391
chr6 105388974 105388979 USF1 TRANSFAC yes 70407392
chr6 105388974 105388979 USF2 TRANSFAC yes 70407393
chr6 105388991 105389002 NFKB1 JASPAR yes 70407394
chr6 105389005 105389026 ZNF263 JASPAR yes 70407395
chr6 105389008 105389021 ELF1 JASPAR yes 70407396
chr6 105389008 105389029 ZNF263 JASPAR yes 70407397
chr6 105389009 105389022 ELF3 JASPAR yes 70407398
chr6 105389010 105389021 ELF5 JASPAR yes 70407399
chr6 105389018 105389032 SPI1 JASPAR yes 70407400
chr6 105389026 105389037 E2F1 JASPAR yes 70407401
chr6 105389028 105389039 NRF1 JASPAR yes 70407402
chr6 105389041 105389047 MAZ TRANSFAC yes 70407403
chr6 105389054 105389063 HIC2 JASPAR yes 70407404
chr6 105389057 105389061 LFA1 TRANSFAC yes 70407405
chr6 105389065 105389075 ETV6 JASPAR yes 70407406
chr6 105389067 105389072 ETS2 TRANSFAC yes 70407407
chr6 105389072 105389080 MEIS3 JASPAR yes 70407408
chr6 105389073 105389085 PKNOX1 JASPAR yes 70407409
chr6 105389073 105389085 PKNOX2 JASPAR yes 70407410
chr6 105389073 105389085 TGIF1 JASPAR yes 70407411
chr6 105389073 105389085 TGIF2 JASPAR yes 70407412
chr6 105389092 105389101 RUNX2 JASPAR yes 70407413
chr6 105389100 105389106 ETS1 JASPAR yes 70407414
chr6 105389100 105389106 SPI1 JASPAR yes 70407415
chr6 105389122 105389127 ETS2 TRANSFAC yes 70407416
chr6 105389138 105389148 HOXB13 JASPAR yes 70407417
chr6 105389138 105389149 HOXA10 JASPAR yes 70407418
chr6 105389139 105389148 CDX1 JASPAR yes 70407419
chr6 105389139 105389150 CDX2 JASPAR yes 70407420
chr6 105389170 105389174 LFA1 TRANSFAC yes 70407421
chr6 105389181 105389192 ELK4 JASPAR yes 70407422
chr6 105389181 105389194 ELF3 JASPAR yes 70407423
chr6 105389182 105389192 ELK1 JASPAR yes 70407424
chr6 105389182 105389192 ELK3 JASPAR yes 70407425
chr6 105389182 105389192 ERF JASPAR yes 70407426
chr6 105389182 105389192 ERG JASPAR yes 70407427
chr6 105389182 105389192 ETS1 JASPAR yes 70407428
chr6 105389182 105389192 ETV1 JASPAR yes 70407429
chr6 105389182 105389192 ETV3 JASPAR yes 70407430
chr6 105389182 105389192 ETV4 JASPAR yes 70407431
chr6 105389182 105389192 ETV5 JASPAR yes 70407432
chr6 105389182 105389192 ETV6 JASPAR yes 70407433
chr6 105389182 105389192 FEV JASPAR yes 70407434
chr6 105389182 105389192 FLI1 JASPAR yes 70407435
chr6 105389182 105389193 ELF5 JASPAR yes 70407436
chr6 105389182 105389193 ETV2 JASPAR yes 70407437
chr6 105389182 105389193 SPDEF JASPAR yes 70407438
chr6 105389182 105389194 EHF JASPAR yes 70407439
chr6 105389182 105389194 ELF1 JASPAR yes 70407440
chr6 105389182 105389194 ELF4 JASPAR yes 70407441
chr6 105389182 105389195 ELF1 JASPAR yes 70407442
chr6 105389182 105389196 SPI1 JASPAR yes 70407443
chr6 105389183 105389191 FEV JASPAR yes 70407444
chr6 105389183 105389192 ELK4 JASPAR yes 70407445
chr6 105389184 105389190 ETS1 JASPAR yes 70407446
chr6 105389184 105389190 SPI1 JASPAR yes 70407447
chr6 105389184 105389194 ELK1 JASPAR yes 70407448
chr6 105389189 105389202 EOMES JASPAR yes 70407449
chr6 105389191 105389201 TBR1 JASPAR yes 70407450
chr6 105389191 105389202 TBX20 JASPAR yes 70407451
chr6 105389191 105389202 TBX2 JASPAR yes 70407452
chr6 105389192 105389202 TBX21 JASPAR yes 70407453
chr6 105389193 105389201 MGA JASPAR yes 70407454
chr6 105389193 105389201 TBX15 JASPAR yes 70407455
chr6 105389193 105389201 TBX1 JASPAR yes 70407456
chr6 105389193 105389201 TBX4 JASPAR yes 70407457
chr6 105389193 105389201 TBX5 JASPAR yes 70407458
chr6 105389196 105389211 PRDM1 JASPAR yes 70407459
chr6 105389238 105389247 HIC2 JASPAR yes 70407460
chr6 105389241 105389245 LFA1 TRANSFAC yes 70407461
chr6 105389249 105389265 RFX3 JASPAR yes 70407462
chr6 105389249 105389265 RFX4 JASPAR yes 70407463
chr6 105389249 105389265 RFX5 JASPAR yes 70407464
chr6 105389250 105389269 RFX2 JASPAR yes 70407465
chr6 105389263 105389268 SP1 TRANSFAC yes 70407466
chr6 105389279 105389288 RUNX2 JASPAR yes 70407467
chr6 105389293 105389298 SP1 TRANSFAC yes 70407468
chr6 105389312 105389323 E2F1 JASPAR yes 70407469
chr6 105389313 105389324 E2F4 JASPAR yes 70407470
chr6 105389313 105389324 E2F6 JASPAR yes 70407471
chr6 105389317 105389323 MAZ TRANSFAC yes 70407472
chr6 105389319 105389328 HiNF-C TRANSFAC yes 70407473
chr6 105389319 105389329 SP1 JASPAR yes 70407474
chr6 105389320 105389326 SP1 TRANSFAC yes 70407475
chr6 105389321 105389326 SP1 TRANSFAC yes 70407476
chr6 105389322 105389327 SP1 TRANSFAC yes 70407477
chr6 105389322 105389328 SP1 TRANSFAC yes 70407478
chr6 105389324 105389334 SP1 JASPAR yes 70407479
chr6 105389325 105389333 SP1 TRANSFAC yes 70407480
chr6 105389325 105389334 SP1 TRANSFAC yes 70407481
chr6 105389326 105389331 SP1 TRANSFAC yes 70407482
chr6 105389327 105389332 SP1 TRANSFAC yes 70407483
chr6 105389327 105389333 SP1 TRANSFAC yes 70407484
chr6 105389331 105389335 LFA1 TRANSFAC yes 70407485
chr6 105389335 105389341 SP1 TRANSFAC yes 70407486
chr6 105389336 105389341 SP1 TRANSFAC yes 70407487
chr6 105389337 105389342 SP1 TRANSFAC yes 70407488
chr6 105389337 105389343 SP1 TRANSFAC yes 70407489
chr6 105389338 105389346 SP1 TRANSFAC yes 70407490
chr6 105389338 105389346 WT1 TRANSFAC yes 70407491
chr6 105389338 105389349 NRF1 JASPAR yes 70407492
chr6 105389347 105389362 ZBTB33 JASPAR yes 70407493
chr6 105389348 105389367 CTCF JASPAR yes 70407494
chr6 105389355 105389363 SP1 TRANSFAC yes 70407495
chr6 105389355 105389363 WT1 TRANSFAC yes 70407496
chr6 105389355 105389366 NRF1 JASPAR yes 70407497
chr6 105389365 105389376 E2F1 JASPAR yes 70407498
chr6 105389366 105389377 E2F4 JASPAR yes 70407499
chr6 105389380 105389391 NRF1 JASPAR yes 70407500
chr6 105389380 105389401 REST JASPAR yes 70407501
chr6 105389392 105389396 H4TF2 TRANSFAC yes 70407502
chr6 105389401 105389406 SP1 TRANSFAC yes 70407503
chr6 105389405 105389409 H4TF2 TRANSFAC yes 70407504
chr6 105389442 105389447 SP1 TRANSFAC yes 70407505
chr6 105389448 105389467 CTCF JASPAR yes 70407506
chr6 105389476 105389483 E2F4 TRANSFAC yes 70407507
chr6 105389476 105389484 E2F1 JASPAR yes 70407508
chr6 105389500 105389506 LEF1 TRANSFAC yes 70407509
chr6 105389500 105389506 SOX10 JASPAR yes 70407510
chr6 105389508 105389519 NRF1 JASPAR yes 70407511
chr6 105389509 105389513 LFA1 TRANSFAC yes 70407512
chr6 105389527 105389539 IRF1 JASPAR yes 70407513
chr6 105389527 105389541 IRF7 JASPAR yes 70407514
chr6 105389546 105389558 POU3F1 JASPAR yes 70407515
chr6 105389584 105389598 SPI1 JASPAR yes 70407516
chr6 105389590 105389595 ETS2 TRANSFAC yes 70407517
chr6 105389625 105389630 ETS2 TRANSFAC yes 70407518
SNP sites on vista52911[chr6:105388915-105389637]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 105388943 rs551340293 G T
GCM1 GCM2 HINFP
9224014
chr6 105389092 rs537136932 G C
ELF1 RUNX2
9224015
chr6 105389104 rs12528131 A G
ELF1 ETS1 SPI1
9224016
chr6 105389141 rs567759495 T C
CDX1 CDX2 ELF1 HOXA10 HOXB13
9224017
chr6 105389273 rs374761547 C T
ELF1
9224018
chr6 105389380 rs563357408 C T
CTCF NRF1 RAD21 REST
9224019
chr6 105389497 rs542778937 A G
CTCF RAD21
9224020
chr6 105389625 rs9500001 A C
CTCF ETS2
9224021
Genes possibly regulated by vista52911[chr6:105388915-105389637]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 105175968 105307794 - HACE1 ENSG00000085382.7 105307794 0.7 0.99 6832 18879
chr6 105404923 105531207 + LIN28B ENSG00000187772.6 105404923 0.99 0.95 6833 84714
Expression level of Genes
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miRNAs possibly regulated by vista52911[chr6:105388915-105389637]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results