EnhancerDB
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  3. vista52916[chr6:105477997-105478373]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52916[chr6:105477997-105478373]
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Tissue distribution of vista52916
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Transcription factor that possibly regulate vista52916[chr6:105477997-105478373]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 105478002 105478012 GSC2 JASPAR yes 70407611
chr6 105478002 105478012 GSC JASPAR yes 70407612
chr6 105478003 105478011 OTX2 JASPAR yes 70407613
chr6 105478003 105478012 PITX3 JASPAR yes 70407614
chr6 105478008 105478024 SOX4 JASPAR yes 70407615
chr6 105478009 105478024 SOX21 JASPAR yes 70407616
chr6 105478019 105478029 NFATC3 JASPAR yes 70407617
chr6 105478020 105478027 NFATC2 JASPAR yes 70407618
chr6 105478024 105478034 MAX JASPAR yes 70407619
chr6 105478035 105478050 FOXP1 JASPAR yes 70407620
chr6 105478044 105478056 YY1 JASPAR yes 70407621
chr6 105478064 105478075 CDX2 JASPAR yes 70407622
chr6 105478065 105478076 HOXA10 JASPAR yes 70407623
chr6 105478066 105478075 CDX1 JASPAR yes 70407624
chr6 105478066 105478076 HOXA13 JASPAR yes 70407625
chr6 105478066 105478076 HOXB13 JASPAR yes 70407626
chr6 105478066 105478076 HOXD13 JASPAR yes 70407627
chr6 105478066 105478082 POU4F2 JASPAR yes 70407628
chr6 105478066 105478082 POU4F3 JASPAR yes 70407629
chr6 105478068 105478082 POU4F1 JASPAR yes 70407630
chr6 105478072 105478086 ONECUT2 JASPAR yes 70407631
chr6 105478072 105478086 ONECUT3 JASPAR yes 70407632
chr6 105478077 105478088 FOXH1 JASPAR yes 70407633
chr6 105478078 105478090 FOXC2 JASPAR yes 70407634
chr6 105478081 105478089 FOXG1 JASPAR yes 70407635
chr6 105478082 105478090 FOXL1 JASPAR yes 70407636
chr6 105478101 105478116 IRF9 JASPAR yes 70407637
chr6 105478103 105478117 STAT1 JASPAR yes 70407638
chr6 105478104 105478116 IRF1 JASPAR yes 70407639
chr6 105478115 105478130 FOXP1 JASPAR yes 70407640
chr6 105478116 105478127 FOXA1 JASPAR yes 70407641
chr6 105478118 105478129 FOXP2 JASPAR yes 70407642
chr6 105478131 105478138 MEIS1 JASPAR yes 70407643
chr6 105478135 105478147 GLI2 JASPAR yes 70407644
chr6 105478148 105478154 HiNF-A TRANSFAC yes 70407645
chr6 105478158 105478164 SOX10 JASPAR yes 70407646
chr6 105478162 105478172 SREBF2 JASPAR yes 70407647
chr6 105478162 105478172 TFAP4 JASPAR yes 70407648
chr6 105478169 105478175 YY1 JASPAR yes 70407649
chr6 105478179 105478194 RFX5 JASPAR yes 70407650
chr6 105478198 105478210 E2F8 JASPAR yes 70407651
chr6 105478202 105478208 MZF1 JASPAR yes 70407652
chr6 105478214 105478220 TBP TRANSFAC yes 70407653
chr6 105478218 105478232 TCF7L2 JASPAR yes 70407654
chr6 105478218 105478233 LEF1 JASPAR yes 70407655
chr6 105478222 105478228 TCF1 TRANSFAC yes 70407656
chr6 105478231 105478237 LEF1 TRANSFAC yes 70407657
chr6 105478231 105478237 TCF4 TRANSFAC yes 70407658
chr6 105478237 105478240 MYB TRANSFAC yes 70407659
chr6 105478241 105478255 ONECUT3 JASPAR yes 70407660
chr6 105478247 105478252 H4TF1 TRANSFAC yes 70407661
chr6 105478248 105478263 LEF1 JASPAR yes 70407662
chr6 105478249 105478263 TCF7L2 JASPAR yes 70407663
chr6 105478262 105478266 YY1 TRANSFAC yes 70407664
chr6 105478263 105478271 FEV JASPAR yes 70407665
chr6 105478287 105478302 SOX21 JASPAR yes 70407666
chr6 105478293 105478309 SOX8 JASPAR yes 70407667
chr6 105478298 105478313 LEF1 JASPAR yes 70407668
chr6 105478299 105478313 TCF7L2 JASPAR yes 70407669
chr6 105478301 105478309 TCF4 TRANSFAC yes 70407670
chr6 105478302 105478308 LEF1 TRANSFAC yes 70407671
chr6 105478302 105478308 TCF4 TRANSFAC yes 70407672
chr6 105478304 105478318 RORA JASPAR yes 70407673
chr6 105478315 105478328 POU3F3 JASPAR yes 70407674
chr6 105478315 105478329 POU1F1 JASPAR yes 70407675
chr6 105478316 105478328 FOXI1 JASPAR yes 70407676
chr6 105478316 105478328 POU3F1 JASPAR yes 70407677
chr6 105478316 105478328 POU3F2 JASPAR yes 70407678
chr6 105478317 105478325 FOXL1 JASPAR yes 70407679
chr6 105478317 105478331 FOXF2 JASPAR yes 70407680
chr6 105478318 105478326 FOXG1 JASPAR yes 70407681
chr6 105478319 105478329 HOXA13 JASPAR yes 70407682
chr6 105478319 105478329 HOXB13 JASPAR yes 70407683
chr6 105478319 105478329 HOXD13 JASPAR yes 70407684
chr6 105478329 105478346 ZNF410 JASPAR yes 70407685
chr6 105478356 105478367 HOXC13 JASPAR yes 70407686
chr6 105478357 105478367 HOXA13 JASPAR yes 70407687
chr6 105478357 105478367 HOXB13 JASPAR yes 70407688
chr6 105478357 105478367 HOXD13 JASPAR yes 70407689
chr6 105478359 105478363 TEAD2 TRANSFAC yes 70407690
chr6 105478359 105478364 TBP TRANSFAC yes 70407691
chr6 105478359 105478365 TFIID TRANSFAC yes 70407692
chr6 105478366 105478370 YY1 TRANSFAC yes 70407693
SNP sites on vista52916[chr6:105477997-105478373]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 105478280 rs551488500 TTAGTAATGAGAATAAAATTGTGC T no 9224578
chr6 105478291 rs141825147 A C
SOX21
9224579
Genes possibly regulated by vista52916[chr6:105477997-105478373]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 105404923 105531207 + LIN28B ENSG00000187772.6 105404923 0.99 0.95 6833 26926
Expression level of Genes
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miRNAs possibly regulated by vista52916[chr6:105477997-105478373]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results