EnhancerDB
  1. Home
  2. Enhancers
  3. vista5293[chr1:224393253-224393414]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5293[chr1:224393253-224393414]
Back to top
Tissue distribution of vista5293
Back to top
Transcription factor that possibly regulate vista5293[chr1:224393253-224393414]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 224392391 224393513 KAP1 UCSC Txn Factor no Conserved 107873620
chr1 224392449 224393308 GATA2 UCSC Txn Factor no Conserved 107873624
chr1 224393247 224393259 PKNOX1 JASPAR yes 35693737
chr1 224393247 224393259 PKNOX2 JASPAR yes 35693738
chr1 224393247 224393259 TGIF2 JASPAR yes 35693739
chr1 224393247 224393259 PKNOX1 JASPAR yes 118467994
chr1 224393247 224393259 PKNOX2 JASPAR yes 118467995
chr1 224393247 224393259 TGIF2 JASPAR yes 118467996
chr1 224393248 224393259 USF2 JASPAR yes 35693740
chr1 224393248 224393259 USF2 JASPAR yes 118467997
chr1 224393255 224393267 INSM1 JASPAR yes 35693741
chr1 224393255 224393267 INSM1 JASPAR yes 118467998
chr1 224393265 224393280 PRDM1 JASPAR yes 35693742
chr1 224393265 224393280 PRDM1 JASPAR yes 118467999
chr1 224393265 224393286 ZNF263 JASPAR yes 35693743
chr1 224393265 224393286 ZNF263 JASPAR yes 118468000
chr1 224393267 224393288 IRF1 JASPAR yes 35693744
chr1 224393267 224393288 IRF1 JASPAR yes 118468001
chr1 224393269 224393274 ETS2 TRANSFAC yes 35693745
chr1 224393269 224393274 ETS2 TRANSFAC yes 118468002
chr1 224393271 224393289 IRF2 JASPAR yes 35693746
chr1 224393271 224393289 IRF2 JASPAR yes 118468003
chr1 224393282 224393293 NFKB1 JASPAR yes 35693747
chr1 224393282 224393293 NFKB1 JASPAR yes 118468004
chr1 224393283 224393288 SP1 TRANSFAC yes 35693748
chr1 224393283 224393288 SP1 TRANSFAC yes 118468005
chr1 224393290 224393300 SP1 JASPAR yes 35693749
chr1 224393290 224393300 SP1 JASPAR yes 118468006
chr1 224393295 224393305 TFE3 JASPAR yes 35693750
chr1 224393295 224393305 TFEB JASPAR yes 35693751
chr1 224393295 224393305 TFE3 JASPAR yes 118468007
chr1 224393295 224393305 TFEB JASPAR yes 118468008
chr1 224393295 224393306 USF1 JASPAR yes 35693752
chr1 224393295 224393306 USF1 JASPAR yes 118468009
chr1 224393298 224393309 FOSL2 JASPAR yes 35693753
chr1 224393298 224393309 JUNB JASPAR yes 35693754
chr1 224393298 224393309 FOSL2 JASPAR yes 118468010
chr1 224393298 224393309 JUNB JASPAR yes 118468011
chr1 224393299 224393310 FOS JASPAR yes 35693755
chr1 224393299 224393310 FOSL1 JASPAR yes 35693756
chr1 224393299 224393310 JUND JASPAR yes 35693757
chr1 224393299 224393310 NFE2 JASPAR yes 35693758
chr1 224393299 224393310 FOS JASPAR yes 118468012
chr1 224393299 224393310 FOSL1 JASPAR yes 118468013
chr1 224393299 224393310 JUND JASPAR yes 118468014
chr1 224393299 224393310 NFE2 JASPAR yes 118468015
chr1 224393300 224393309 JDP2 JASPAR yes 35693759
chr1 224393300 224393309 JDP2 JASPAR yes 118468016
chr1 224393300 224393311 FOSL2 JASPAR yes 35693760
chr1 224393300 224393311 JUNB JASPAR yes 35693761
chr1 224393300 224393311 FOSL2 JASPAR yes 118468017
chr1 224393300 224393311 JUNB JASPAR yes 118468018
chr1 224393300 224393314 JUN JASPAR yes 35693762
chr1 224393300 224393314 JUN JASPAR yes 118468019
chr1 224393305 224393313 MGA JASPAR yes 35693763
chr1 224393305 224393313 TBX1 JASPAR yes 35693764
chr1 224393305 224393313 MGA JASPAR yes 118468020
chr1 224393305 224393313 TBX1 JASPAR yes 118468021
chr1 224393322 224393342 RREB1 JASPAR yes 35693765
chr1 224393322 224393342 RREB1 JASPAR yes 118468022
chr1 224393323 224393343 RREB1 JASPAR yes 35693766
chr1 224393323 224393343 RREB1 JASPAR yes 118468023
chr1 224393324 224393344 RREB1 JASPAR yes 35693767
chr1 224393324 224393344 RREB1 JASPAR yes 118468024
chr1 224393326 224393346 RREB1 JASPAR yes 35693768
chr1 224393326 224393346 RREB1 JASPAR yes 118468025
chr1 224393327 224393347 RREB1 JASPAR yes 35693769
chr1 224393327 224393347 RREB1 JASPAR yes 118468026
chr1 224393328 224393338 SP1 JASPAR yes 35693770
chr1 224393328 224393338 SP1 JASPAR yes 118468027
chr1 224393328 224393348 RREB1 JASPAR yes 35693771
chr1 224393328 224393348 RREB1 JASPAR yes 118468028
chr1 224393329 224393337 SP1 TRANSFAC yes 35693772
chr1 224393329 224393337 SP1 TRANSFAC yes 118468029
chr1 224393329 224393339 SP1 JASPAR yes 35693773
chr1 224393329 224393339 SP1 JASPAR yes 118468030
chr1 224393330 224393350 RREB1 JASPAR yes 35693774
chr1 224393330 224393350 RREB1 JASPAR yes 118468031
chr1 224393333 224393343 ZNF740 JASPAR yes 35693775
chr1 224393333 224393343 ZNF740 JASPAR yes 118468032
chr1 224393333 224393353 RREB1 JASPAR yes 35693776
chr1 224393333 224393353 RREB1 JASPAR yes 118468033
chr1 224393334 224393344 SP1 JASPAR yes 35693777
chr1 224393334 224393344 ZNF740 JASPAR yes 35693778
chr1 224393334 224393344 SP1 JASPAR yes 118468034
chr1 224393334 224393344 ZNF740 JASPAR yes 118468035
chr1 224393334 224393354 RREB1 JASPAR yes 35693779
chr1 224393334 224393354 RREB1 JASPAR yes 118468036
chr1 224393335 224393345 SP1 JASPAR yes 35693780
chr1 224393335 224393345 ZNF740 JASPAR yes 35693781
chr1 224393335 224393345 SP1 JASPAR yes 118468037
chr1 224393335 224393345 ZNF740 JASPAR yes 118468038
chr1 224393335 224393355 RREB1 JASPAR yes 35693782
chr1 224393335 224393355 RREB1 JASPAR yes 118468039
chr1 224393336 224393346 SP1 JASPAR yes 35693783
chr1 224393336 224393346 ZNF740 JASPAR yes 35693784
chr1 224393336 224393346 SP1 JASPAR yes 118468040
chr1 224393336 224393346 ZNF740 JASPAR yes 118468041
chr1 224393336 224393356 RREB1 JASPAR yes 35693785
chr1 224393336 224393356 RREB1 JASPAR yes 118468042
chr1 224393337 224393347 SP1 JASPAR yes 35693786
chr1 224393337 224393347 ZNF740 JASPAR yes 35693787
chr1 224393337 224393347 SP1 JASPAR yes 118468043
chr1 224393337 224393347 ZNF740 JASPAR yes 118468044
chr1 224393337 224393357 RREB1 JASPAR yes 35693788
chr1 224393337 224393357 RREB1 JASPAR yes 118468045
chr1 224393338 224393348 ZNF740 JASPAR yes 35693789
chr1 224393338 224393348 ZNF740 JASPAR yes 118468046
chr1 224393338 224393358 RREB1 JASPAR yes 35693790
chr1 224393338 224393358 RREB1 JASPAR yes 118468047
chr1 224393339 224393349 ZNF740 JASPAR yes 35693791
chr1 224393339 224393349 ZNF740 JASPAR yes 118468048
chr1 224393340 224393360 RREB1 JASPAR yes 35693792
chr1 224393340 224393360 RREB1 JASPAR yes 118468049
chr1 224393341 224393361 RREB1 JASPAR yes 35693793
chr1 224393341 224393361 RREB1 JASPAR yes 118468050
chr1 224393342 224393362 RREB1 JASPAR yes 35693794
chr1 224393342 224393362 RREB1 JASPAR yes 118468051
chr1 224393343 224393363 RREB1 JASPAR yes 35693795
chr1 224393343 224393363 RREB1 JASPAR yes 118468052
chr1 224393346 224393366 RREB1 JASPAR yes 35693796
chr1 224393346 224393366 RREB1 JASPAR yes 118468053
chr1 224393348 224393368 RREB1 JASPAR yes 35693797
chr1 224393348 224393368 RREB1 JASPAR yes 118468054
chr1 224393374 224393386 BHLHE23 JASPAR yes 35693798
chr1 224393374 224393386 BHLHE23 JASPAR yes 118468055
chr1 224393375 224393385 BHLHE22 JASPAR yes 35693799
chr1 224393375 224393385 OLIG2 JASPAR yes 35693800
chr1 224393375 224393385 BHLHE22 JASPAR yes 118468056
chr1 224393375 224393385 OLIG2 JASPAR yes 118468057
chr1 224393396 224393403 JUN TRANSFAC yes 35693801
chr1 224393396 224393403 JUN TRANSFAC yes 118468058
chr1 224393409 224393415 YY1 JASPAR yes 35693802
chr1 224393409 224393415 YY1 JASPAR yes 118468059
SNP sites on vista5293[chr1:224393253-224393414]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 224393253 rs9660147 G A
GATA2 KAP1 PKNOX1 PKNOX2 TGIF2 USF2
980627
chr1 224393334 rs398089910 GC G
KAP1 RREB1 SP1 ZNF740
980628
chr1 224393334 rs58212261 GC G
KAP1 RREB1 SP1 ZNF740
980629
chr1 224393343 rs35872528 C T
KAP1 RREB1 SP1 ZNF740
980630
chr1 224393371 rs72755912 T C
KAP1
980631
chr1 224393380 rs570313992 T C
BHLHE22 BHLHE23 KAP1 OLIG2
980632
chr1 224393404 rs9661659 T C
KAP1
980633
Genes possibly regulated by vista5293[chr1:224393253-224393414]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 224301789 224349749 + FBXO28 ENSG00000143756.7 224301789 0.63 0.99 1878 8536
chr1 224363458 224381143 + DEGS1 ENSG00000143753.8 224363458 0.72 0.98 1879 70205
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5293[chr1:224393253-224393414]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results