EnhancerDB
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  3. vista52955[chr6:106323209-106323562]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52955[chr6:106323209-106323562]
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Tissue distribution of vista52955
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Transcription factor that possibly regulate vista52955[chr6:106323209-106323562]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106323200 106323211 TFAP2A JASPAR yes 70409560
chr6 106323200 106323211 TFAP2A JASPAR yes 103989308
chr6 106323206 106323219 SCRT2 JASPAR yes 70409561
chr6 106323206 106323219 SCRT2 JASPAR yes 103989309
chr6 106323224 106323235 E2F6 JASPAR yes 70409562
chr6 106323224 106323235 E2F6 JASPAR yes 103989310
chr6 106323225 106323230 SP1 TRANSFAC yes 70409563
chr6 106323225 106323230 SP1 TRANSFAC yes 103989311
chr6 106323237 106323252 HSF1 JASPAR yes 70409564
chr6 106323237 106323252 HSF1 JASPAR yes 103989312
chr6 106323240 106323255 HNF4G JASPAR yes 70409565
chr6 106323240 106323255 HNF4G JASPAR yes 103989313
chr6 106323241 106323255 NR2F1 JASPAR yes 70409566
chr6 106323241 106323255 RXRB JASPAR yes 70409567
chr6 106323241 106323255 RXRG JASPAR yes 70409568
chr6 106323241 106323255 NR2F1 JASPAR yes 103989314
chr6 106323241 106323255 RXRB JASPAR yes 103989315
chr6 106323241 106323255 RXRG JASPAR yes 103989316
chr6 106323241 106323256 HNF4A JASPAR yes 70409569
chr6 106323241 106323256 HNF4A JASPAR yes 103989317
chr6 106323246 106323259 NR2F1 JASPAR yes 70409570
chr6 106323246 106323259 NR2F1 JASPAR yes 103989318
chr6 106323248 106323256 NR4A2 JASPAR yes 70409571
chr6 106323248 106323256 NR4A2 JASPAR yes 103989319
chr6 106323249 106323268 CTCF JASPAR yes 70409572
chr6 106323249 106323268 CTCF JASPAR yes 103989320
chr6 106323250 106323254 ESR1 TRANSFAC yes 70409573
chr6 106323250 106323254 ESR1 TRANSFAC yes 103989321
chr6 106323258 106323273 RUNX2 JASPAR yes 70409574
chr6 106323258 106323273 RUNX2 JASPAR yes 103989322
chr6 106323263 106323272 RUNX2 JASPAR yes 70409575
chr6 106323263 106323272 RUNX2 JASPAR yes 103989323
chr6 106323284 106323294 MAX JASPAR yes 70409576
chr6 106323284 106323294 MAX JASPAR yes 103989324
chr6 106323284 106323295 USF2 JASPAR yes 70409577
chr6 106323284 106323295 USF2 JASPAR yes 103989325
chr6 106323307 106323312 TFAP2A TRANSFAC yes 70409578
chr6 106323307 106323312 TFAP2A TRANSFAC yes 103989326
chr6 106323307 106323313 MZF1 JASPAR yes 70409579
chr6 106323307 106323313 MZF1 JASPAR yes 103989327
chr6 106323308 106323318 NFKB1 JASPAR yes 70409580
chr6 106323308 106323318 REL JASPAR yes 70409581
chr6 106323308 106323318 NFKB1 JASPAR yes 103989328
chr6 106323308 106323318 REL JASPAR yes 103989329
chr6 106323358 106323368 GSX1 JASPAR yes 70409582
chr6 106323358 106323368 GSX2 JASPAR yes 70409583
chr6 106323358 106323368 HOXB3 JASPAR yes 70409584
chr6 106323358 106323368 GSX1 JASPAR yes 103989330
chr6 106323358 106323368 GSX2 JASPAR yes 103989331
chr6 106323358 106323368 HOXB3 JASPAR yes 103989332
chr6 106323361 106323365 YY1 TRANSFAC yes 70409585
chr6 106323361 106323365 YY1 TRANSFAC yes 103989333
chr6 106323392 106323396 YY1 TRANSFAC yes 70409586
chr6 106323392 106323396 YY1 TRANSFAC yes 103989334
chr6 106323397 106323405 FOXL1 JASPAR yes 70409587
chr6 106323397 106323405 FOXL1 JASPAR yes 103989335
chr6 106323402 106323409 NKX3-1 JASPAR yes 70409588
chr6 106323402 106323409 NKX3-1 JASPAR yes 103989336
chr6 106323433 106323439 MYC TRANSFAC yes 70409589
chr6 106323433 106323439 MYC TRANSFAC yes 103989337
chr6 106323457 106323471 GATA2 JASPAR yes 70409590
chr6 106323457 106323471 GATA2 JASPAR yes 103989338
chr6 106323459 106323465 GATA3 JASPAR yes 70409591
chr6 106323459 106323465 GATA3 JASPAR yes 103989339
chr6 106323508 106323518 TFEB JASPAR yes 70409592
chr6 106323508 106323518 TFEC JASPAR yes 70409593
chr6 106323508 106323518 TFEB JASPAR yes 103989340
chr6 106323508 106323518 TFEC JASPAR yes 103989341
chr6 106323508 106323519 USF1 JASPAR yes 70409594
chr6 106323508 106323519 USF2 JASPAR yes 70409595
chr6 106323508 106323519 USF1 JASPAR yes 103989342
chr6 106323508 106323519 USF2 JASPAR yes 103989343
chr6 106323515 106323531 ZNF143 JASPAR yes 70409596
chr6 106323515 106323531 ZNF143 JASPAR yes 103989344
chr6 106323539 106323554 TFAP2A JASPAR yes 70409597
chr6 106323539 106323554 TFAP2A JASPAR yes 103989345
chr6 106323549 106323553 YY1 TRANSFAC yes 70409598
chr6 106323549 106323553 YY1 TRANSFAC yes 103989346
SNP sites on vista52955[chr6:106323209-106323562]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106323213 rs10569878 CAAG C
SCRT2
9230100
chr6 106323213 rs71746849 CAAG C
SCRT2
9230101
chr6 106323339 rs144219154 C A no 9230102
chr6 106323384 rs185407448 T A no 9230103
chr6 106323416 rs562115435 AC A no 9230104
chr6 106323464 rs11152927 A G
GATA2 GATA3
9230105
chr6 106323515 rs141835383 T G
TFEB TFEC USF1 USF2 ZNF143
9230106
chr6 106323550 rs72933644 C G,T
TFAP2A YY1
9230107
Genes possibly regulated by vista52955[chr6:106323209-106323562]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52955[chr6:106323209-106323562]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results