EnhancerDB
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  3. vista52960[chr6:106335541-106335714]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52960[chr6:106335541-106335714]
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Tissue distribution of vista52960
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Transcription factor that possibly regulate vista52960[chr6:106335541-106335714]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106335529 106335544 STAT2 JASPAR yes 70409861
chr6 106335529 106335544 STAT2 JASPAR yes 103990918
chr6 106335530 106335544 STAT1 JASPAR yes 70409862
chr6 106335530 106335544 STAT1 JASPAR yes 103990919
chr6 106335531 106335546 IRF9 JASPAR yes 70409863
chr6 106335531 106335546 IRF9 JASPAR yes 103990920
chr6 106335572 106335580 RHOXF1 JASPAR yes 70409864
chr6 106335572 106335580 RHOXF1 JASPAR yes 103990921
chr6 106335576 106335587 FOXB1 JASPAR yes 70409865
chr6 106335576 106335587 FOXB1 JASPAR yes 103990922
chr6 106335578 106335587 POU3F4 JASPAR yes 70409866
chr6 106335578 106335587 POU3F4 JASPAR yes 103990923
chr6 106335579 106335587 FOXL1 JASPAR yes 70409867
chr6 106335579 106335587 FOXL1 JASPAR yes 103990924
chr6 106335591 106335595 YY1 TRANSFAC yes 70409868
chr6 106335591 106335595 YY1 TRANSFAC yes 103990925
chr6 106335592 106335602 HOXD11 JASPAR yes 70409869
chr6 106335592 106335602 HOXD11 JASPAR yes 103990926
chr6 106335592 106335603 HOXC11 JASPAR yes 70409870
chr6 106335592 106335603 HOXC12 JASPAR yes 70409871
chr6 106335592 106335603 HOXC11 JASPAR yes 103990927
chr6 106335592 106335603 HOXC12 JASPAR yes 103990928
chr6 106335604 106335616 E2F8 JASPAR yes 70409872
chr6 106335604 106335616 E2F8 JASPAR yes 103990929
chr6 106335605 106335617 INSM1 JASPAR yes 70409873
chr6 106335605 106335617 INSM1 JASPAR yes 103990930
chr6 106335612 106335618 HiNF-A TRANSFAC yes 70409874
chr6 106335612 106335618 HiNF-A TRANSFAC yes 103990931
chr6 106335626 106335630 YY1 TRANSFAC yes 70409875
chr6 106335626 106335630 YY1 TRANSFAC yes 103990932
chr6 106335630 106335645 RFX5 JASPAR yes 70409876
chr6 106335630 106335645 RFX5 JASPAR yes 103990933
chr6 106335635 106335646 FOSL2 JASPAR yes 70409877
chr6 106335635 106335646 JUNB JASPAR yes 70409878
chr6 106335635 106335646 FOSL2 JASPAR yes 103990934
chr6 106335635 106335646 JUNB JASPAR yes 103990935
chr6 106335636 106335647 FOSL1 JASPAR yes 70409879
chr6 106335636 106335647 JUND JASPAR yes 70409880
chr6 106335636 106335647 FOSL1 JASPAR yes 103990936
chr6 106335636 106335647 JUND JASPAR yes 103990937
chr6 106335637 106335644 JUN TRANSFAC yes 70409881
chr6 106335637 106335644 JUN TRANSFAC yes 103990938
chr6 106335642 106335645 MYB TRANSFAC yes 70409882
chr6 106335642 106335645 MYB TRANSFAC yes 103990939
chr6 106335649 106335669 RREB1 JASPAR yes 70409883
chr6 106335649 106335669 RREB1 JASPAR yes 103990940
chr6 106335650 106335665 RUNX2 JASPAR yes 70409884
chr6 106335650 106335665 RUNX2 JASPAR yes 103990941
chr6 106335651 106335671 RREB1 JASPAR yes 70409885
chr6 106335651 106335671 RREB1 JASPAR yes 103990942
chr6 106335654 106335674 RREB1 JASPAR yes 70409886
chr6 106335654 106335674 RREB1 JASPAR yes 103990943
chr6 106335661 106335665 H1TF2 TRANSFAC yes 70409887
chr6 106335661 106335665 NFE TRANSFAC yes 70409888
chr6 106335661 106335665 SRF TRANSFAC yes 70409889
chr6 106335661 106335665 H1TF2 TRANSFAC yes 103990944
chr6 106335661 106335665 NFE TRANSFAC yes 103990945
chr6 106335661 106335665 SRF TRANSFAC yes 103990946
chr6 106335674 106335679 SP1 TRANSFAC yes 70409890
chr6 106335674 106335679 SP1 TRANSFAC yes 103990947
chr6 106335681 106335684 MYB TRANSFAC yes 70409891
chr6 106335681 106335684 MYB TRANSFAC yes 103990948
chr6 106335695 106335707 NHLH1 JASPAR yes 70409892
chr6 106335695 106335707 NHLH1 JASPAR yes 103990949
chr6 106335695 106335708 ZBTB18 JASPAR yes 70409893
chr6 106335695 106335708 ZBTB18 JASPAR yes 103990950
chr6 106335696 106335706 NHLH1 JASPAR yes 70409894
chr6 106335696 106335706 TFAP4 JASPAR yes 70409895
chr6 106335696 106335706 NHLH1 JASPAR yes 103990951
chr6 106335696 106335706 TFAP4 JASPAR yes 103990952
chr6 106335710 106335723 EOMES JASPAR yes 70409896
chr6 106335710 106335723 EOMES JASPAR yes 103990953
chr6 106335712 106335722 TBR1 JASPAR yes 70409897
chr6 106335712 106335722 TBR1 JASPAR yes 103990954
chr6 106335712 106335723 TBX20 JASPAR yes 70409898
chr6 106335712 106335723 TBX2 JASPAR yes 70409899
chr6 106335712 106335723 TBX20 JASPAR yes 103990955
chr6 106335712 106335723 TBX2 JASPAR yes 103990956
chr6 106335713 106335723 TBX21 JASPAR yes 70409900
chr6 106335713 106335723 TBX21 JASPAR yes 103990957
chr6 106335714 106335722 MGA JASPAR yes 70409901
chr6 106335714 106335722 TBX15 JASPAR yes 70409902
chr6 106335714 106335722 TBX1 JASPAR yes 70409903
chr6 106335714 106335722 TBX4 JASPAR yes 70409904
chr6 106335714 106335722 TBX5 JASPAR yes 70409905
chr6 106335714 106335722 MGA JASPAR yes 103990958
chr6 106335714 106335722 TBX15 JASPAR yes 103990959
chr6 106335714 106335722 TBX1 JASPAR yes 103990960
chr6 106335714 106335722 TBX4 JASPAR yes 103990961
chr6 106335714 106335722 TBX5 JASPAR yes 103990962
SNP sites on vista52960[chr6:106335541-106335714]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106335553 rs6568412 T C no 9230262
chr6 106335555 rs6420679 G T no 9230263
chr6 106335646 rs76247775 C T
FOSL1 FOSL2 JUNB JUND
9230264
chr6 106335672 rs4434503 T A,C
RREB1
9230265
Genes possibly regulated by vista52960[chr6:106335541-106335714]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista52960[chr6:106335541-106335714]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results