EnhancerDB
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  3. vista5297[chr1:224598124-224598418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5297[chr1:224598124-224598418]
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Tissue distribution of vista5297
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Transcription factor that possibly regulate vista5297[chr1:224598124-224598418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 224598130 224598143 POU2F2 JASPAR yes 118468169
chr1 224598138 224598145 NKX3-1 JASPAR yes 118468170
chr1 224598147 224598167 RREB1 JASPAR yes 118468171
chr1 224598161 224598174 NR2F1 JASPAR yes 118468172
chr1 224598165 224598169 ESR1 TRANSFAC yes 118468173
chr1 224598176 224598180 TEAD2 TRANSFAC yes 118468174
chr1 224598176 224598181 TBP TRANSFAC yes 118468175
chr1 224598252 224598267 FOXP1 JASPAR yes 118468176
chr1 224598255 224598266 FOXP2 JASPAR yes 118468177
chr1 224598256 224598264 FOXO3 JASPAR yes 118468178
chr1 224598257 224598266 SRY JASPAR yes 118468179
chr1 224598261 224598267 SOX10 JASPAR yes 118468180
chr1 224598275 224598286 CEBPB JASPAR yes 118468181
chr1 224598275 224598287 DBP JASPAR yes 118468182
chr1 224598275 224598287 HLF JASPAR yes 118468183
chr1 224598275 224598287 TEF JASPAR yes 118468184
chr1 224598276 224598286 CEBPB JASPAR yes 118468185
chr1 224598276 224598286 CEBPD JASPAR yes 118468186
chr1 224598276 224598286 CEBPE JASPAR yes 118468187
chr1 224598276 224598286 CEBPG JASPAR yes 118468188
chr1 224598276 224598287 CEBPA JASPAR yes 118468189
chr1 224598288 224598292 H4TF2 TRANSFAC yes 118468190
chr1 224598292 224598300 HOXA5 JASPAR yes 118468191
chr1 224598335 224598345 POU6F2 JASPAR yes 118468192
chr1 224598335 224598346 BATF JASPAR yes 118468193
chr1 224598350 224598353 MYB TRANSFAC yes 118468194
chr1 224598352 224598363 RUNX1 JASPAR yes 118468195
chr1 224598353 224598363 RUNX3 JASPAR yes 118468196
chr1 224598354 224598363 RUNX2 JASPAR yes 118468197
chr1 224598366 224598382 SOX8 JASPAR yes 118468198
chr1 224598380 224598401 IRF1 JASPAR yes 118468199
chr1 224598382 224598403 IRF1 JASPAR yes 118468200
chr1 224598386 224598407 IRF1 JASPAR yes 118468201
chr1 224598388 224598403 PRDM1 JASPAR yes 118468202
chr1 224598388 224598403 STAT2 JASPAR yes 118468203
chr1 224598389 224598403 SPIC JASPAR yes 118468204
chr1 224598389 224598403 STAT1 JASPAR yes 118468205
chr1 224598390 224598411 IRF1 JASPAR yes 118468206
chr1 224598391 224598406 FOXP1 JASPAR yes 118468207
chr1 224598391 224598412 IRF1 JASPAR yes 118468208
chr1 224598392 224598413 IRF1 JASPAR yes 118468209
chr1 224598393 224598408 FOXP1 JASPAR yes 118468210
chr1 224598393 224598414 IRF1 JASPAR yes 118468211
chr1 224598394 224598415 IRF1 JASPAR yes 118468212
chr1 224598395 224598410 FOXP1 JASPAR yes 118468213
chr1 224598395 224598416 IRF1 JASPAR yes 118468214
chr1 224598396 224598411 FOXP1 JASPAR yes 118468215
chr1 224598396 224598417 IRF1 JASPAR yes 118468216
chr1 224598397 224598412 FOXP1 JASPAR yes 118468217
chr1 224598398 224598413 FOXP1 JASPAR yes 118468218
chr1 224598399 224598414 FOXP1 JASPAR yes 118468219
chr1 224598400 224598415 FOXP1 JASPAR yes 118468220
chr1 224598401 224598416 FOXP1 JASPAR yes 118468221
chr1 224598402 224598417 FOXP1 JASPAR yes 118468222
chr1 224598403 224598418 FOXP1 JASPAR yes 118468223
SNP sites on vista5297[chr1:224598124-224598418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 224598359 rs141394879 G A
RUNX1 RUNX2 RUNX3
981600
chr1 224598361 rs150831229 T C
RUNX1 RUNX2 RUNX3
981601
Genes possibly regulated by vista5297[chr1:224598124-224598418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 224415036 224518089 - NVL ENSG00000143748.13 224518089 0.7 0.99 1880 19965
chr1 224544552 224567161 + CNIH4 ENSG00000143771.7 224544552 0.76 1.0 1881 46428
chr1 224572845 224624735 - WDR26 ENSG00000162923.10 224624735 0.74 1.0 1882 73683
chr1 224622362 224928251 + CNIH3 ENSG00000143786.3 224622362 0.86 1.0 1883 76056
Expression level of Genes
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miRNAs possibly regulated by vista5297[chr1:224598124-224598418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results