EnhancerDB
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  3. vista52977[chr6:106440406-106440671]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52977[chr6:106440406-106440671]
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Tissue distribution of vista52977
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Transcription factor that possibly regulate vista52977[chr6:106440406-106440671]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106440244 106440600 IRF1 UCSC Txn Factor no Conserved 108541147
chr6 106440288 106440897 MAX UCSC Txn Factor no Conserved 108541148
chr6 106440290 106440466 PRDM1 UCSC Txn Factor no Conserved 108541149
chr6 106440329 106440619 USF2 UCSC Txn Factor no Conserved 108541150
chr6 106440350 106440610 USF1 UCSC Txn Factor no Conserved 108541151
chr6 106440369 106440952 E2F6 UCSC Txn Factor no Conserved 108541152
chr6 106440390 106440411 IRF1 JASPAR yes 70410582
chr6 106440390 106440411 IRF1 JASPAR yes 103999003
chr6 106440392 106440407 IRF9 JASPAR yes 70410583
chr6 106440392 106440407 IRF9 JASPAR yes 103999004
chr6 106440393 106440407 IRF7 JASPAR yes 70410584
chr6 106440393 106440407 IRF8 JASPAR yes 70410585
chr6 106440393 106440407 IRF7 JASPAR yes 103999005
chr6 106440393 106440407 IRF8 JASPAR yes 103999006
chr6 106440394 106440408 STAT1 JASPAR yes 70410586
chr6 106440394 106440408 STAT1 JASPAR yes 103999007
chr6 106440394 106440409 PRDM1 JASPAR yes 70410587
chr6 106440394 106440409 STAT2 JASPAR yes 70410588
chr6 106440394 106440409 PRDM1 JASPAR yes 103999008
chr6 106440394 106440409 STAT2 JASPAR yes 103999009
chr6 106440394 106440412 IRF2 JASPAR yes 70410589
chr6 106440394 106440412 IRF2 JASPAR yes 103999010
chr6 106440395 106440407 IRF1 JASPAR yes 70410590
chr6 106440395 106440407 IRF1 JASPAR yes 103999011
chr6 106440396 106440417 IRF1 JASPAR yes 70410591
chr6 106440396 106440417 IRF1 JASPAR yes 103999012
chr6 106440410 106440419 PITX3 JASPAR yes 70410592
chr6 106440410 106440419 PITX3 JASPAR yes 103999013
chr6 106440410 106440420 GSC JASPAR yes 70410593
chr6 106440410 106440420 GSC JASPAR yes 103999014
chr6 106440411 106440419 OTX1 JASPAR yes 70410594
chr6 106440411 106440419 OTX1 JASPAR yes 103999015
chr6 106440449 106440455 MAZ TRANSFAC yes 70410595
chr6 106440449 106440455 MAZ TRANSFAC yes 103999016
chr6 106440452 106440462 SP1 JASPAR yes 70410596
chr6 106440452 106440462 SP1 JASPAR yes 103999017
chr6 106440453 106440461 SP1 TRANSFAC yes 70410597
chr6 106440453 106440461 SP1 TRANSFAC yes 103999018
chr6 106440453 106440462 SP1 TRANSFAC yes 70410598
chr6 106440453 106440462 SP1 TRANSFAC yes 103999019
chr6 106440454 106440459 SP1 TRANSFAC yes 70410599
chr6 106440454 106440459 SP1 TRANSFAC yes 103999020
chr6 106440455 106440460 SP1 TRANSFAC yes 70410600
chr6 106440455 106440460 SP1 TRANSFAC yes 103999021
chr6 106440455 106440461 SP1 TRANSFAC yes 70410601
chr6 106440455 106440461 SP1 TRANSFAC yes 103999022
chr6 106440457 106440472 TFAP2A JASPAR yes 70410602
chr6 106440457 106440472 TFAP2C JASPAR yes 70410603
chr6 106440457 106440472 TFAP2A JASPAR yes 103999023
chr6 106440457 106440472 TFAP2C JASPAR yes 103999024
chr6 106440465 106440482 ESR1 JASPAR yes 70410604
chr6 106440465 106440482 ESR1 JASPAR yes 103999025
chr6 106440466 106440481 ESR2 JASPAR yes 70410605
chr6 106440466 106440481 ESR2 JASPAR yes 103999026
chr6 106440466 106440486 ESR1 JASPAR yes 70410606
chr6 106440466 106440486 ESR1 JASPAR yes 103999027
chr6 106440467 106440471 LFA1 TRANSFAC yes 70410607
chr6 106440467 106440471 LFA1 TRANSFAC yes 103999028
chr6 106440479 106440493 CREB3 JASPAR yes 70410608
chr6 106440479 106440493 CREB3 JASPAR yes 103999029
chr6 106440480 106440484 ESR1 TRANSFAC yes 70410609
chr6 106440480 106440484 ESR1 TRANSFAC yes 103999030
chr6 106440480 106440490 MAX JASPAR yes 70410610
chr6 106440480 106440490 MAX JASPAR yes 103999031
chr6 106440480 106440491 USF1 JASPAR yes 70410611
chr6 106440480 106440491 USF2 JASPAR yes 70410612
chr6 106440480 106440491 USF1 JASPAR yes 103999032
chr6 106440480 106440491 USF2 JASPAR yes 103999033
chr6 106440481 106440491 BHLHE40 JASPAR yes 70410613
chr6 106440481 106440491 BHLHE41 JASPAR yes 70410614
chr6 106440481 106440491 MLXIPL JASPAR yes 70410615
chr6 106440481 106440491 MLX JASPAR yes 70410616
chr6 106440481 106440491 SREBF2 JASPAR yes 70410617
chr6 106440481 106440491 TFE3 JASPAR yes 70410618
chr6 106440481 106440491 TFEB JASPAR yes 70410619
chr6 106440481 106440491 TFEC JASPAR yes 70410620
chr6 106440481 106440491 BHLHE40 JASPAR yes 103999034
chr6 106440481 106440491 BHLHE41 JASPAR yes 103999035
chr6 106440481 106440491 MLXIPL JASPAR yes 103999036
chr6 106440481 106440491 MLX JASPAR yes 103999037
chr6 106440481 106440491 SREBF2 JASPAR yes 103999038
chr6 106440481 106440491 TFE3 JASPAR yes 103999039
chr6 106440481 106440491 TFEB JASPAR yes 103999040
chr6 106440481 106440491 TFEC JASPAR yes 103999041
chr6 106440481 106440492 USF1 JASPAR yes 70410621
chr6 106440481 106440492 USF2 JASPAR yes 70410622
chr6 106440481 106440492 USF1 JASPAR yes 103999042
chr6 106440481 106440492 USF2 JASPAR yes 103999043
chr6 106440483 106440488 MYC TRANSFAC yes 70410623
chr6 106440483 106440488 USF1 TRANSFAC yes 70410624
chr6 106440483 106440488 USF2 TRANSFAC yes 70410625
chr6 106440483 106440488 MYC TRANSFAC yes 103999044
chr6 106440483 106440488 USF1 TRANSFAC yes 103999045
chr6 106440483 106440488 USF2 TRANSFAC yes 103999046
chr6 106440490 106440501 NRF1 JASPAR yes 70410626
chr6 106440490 106440501 NRF1 JASPAR yes 103999047
chr6 106440491 106440503 HINFP JASPAR yes 70410627
chr6 106440491 106440503 HINFP JASPAR yes 103999048
chr6 106440497 106440502 SP1 TRANSFAC yes 70410628
chr6 106440497 106440502 SP1 TRANSFAC yes 103999049
chr6 106440501 106440505 H1TF2 TRANSFAC yes 70410629
chr6 106440501 106440505 NFE TRANSFAC yes 70410630
chr6 106440501 106440505 SRF TRANSFAC yes 70410631
chr6 106440501 106440505 H1TF2 TRANSFAC yes 103999050
chr6 106440501 106440505 NFE TRANSFAC yes 103999051
chr6 106440501 106440505 SRF TRANSFAC yes 103999052
chr6 106440560 106440566 TCF4 TRANSFAC yes 70410632
chr6 106440560 106440566 TCF4 TRANSFAC yes 103999053
chr6 106440570 106440574 YY1 TRANSFAC yes 70410633
chr6 106440570 106440574 YY1 TRANSFAC yes 103999054
chr6 106440601 106440609 FOXO3 JASPAR yes 70410634
chr6 106440601 106440609 FOXO3 JASPAR yes 103999055
chr6 106440602 106440611 SRY JASPAR yes 70410635
chr6 106440602 106440611 SRY JASPAR yes 103999056
chr6 106440604 106440613 SOX9 JASPAR yes 70410636
chr6 106440604 106440613 SOX9 JASPAR yes 103999057
chr6 106440613 106440624 E2F6 JASPAR yes 70410637
chr6 106440613 106440624 E2F6 JASPAR yes 103999058
chr6 106440620 106440630 NKX2-3 JASPAR yes 70410638
chr6 106440620 106440630 NKX2-3 JASPAR yes 103999059
chr6 106440621 106440630 NKX2-8 JASPAR yes 70410639
chr6 106440621 106440630 NKX2-8 JASPAR yes 103999060
chr6 106440622 106440632 ETV3 JASPAR yes 70410640
chr6 106440622 106440632 ETV3 JASPAR yes 103999061
chr6 106440629 106440633 H4TF2 TRANSFAC yes 70410641
chr6 106440629 106440633 H4TF2 TRANSFAC yes 103999062
chr6 106440635 106440650 STAT1 JASPAR yes 70410642
chr6 106440635 106440650 STAT1 JASPAR yes 103999063
SNP sites on vista52977[chr6:106440406-106440671]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106440420 rs62421068 G A
E2F6 GSC IRF1 MAX PRDM1 USF1 USF2
9230979
chr6 106440441 rs544306425 T G
E2F6 IRF1 MAX PRDM1 USF1 USF2
9230980
chr6 106440520 rs139348072 C T
E2F6 IRF1 MAX USF1 USF2
9230981
chr6 106440634 rs113648433 C T
E2F6 MAX
9230982
Genes possibly regulated by vista52977[chr6:106440406-106440671]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 0.89 0.97 6837 6476
Expression level of Genes
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miRNAs possibly regulated by vista52977[chr6:106440406-106440671]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results