EnhancerDB
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  3. vista52978[chr6:106442094-106442641]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52978[chr6:106442094-106442641]
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Tissue distribution of vista52978
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Transcription factor that possibly regulate vista52978[chr6:106442094-106442641]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106441706 106443252 EZH2 UCSC Txn Factor no Conserved 108541153
chr6 106441706 106443252 EZH2 UCSC Txn Factor no Conserved 108541154
chr6 106442024 106443258 POLR2A UCSC Txn Factor no Conserved 108541155
chr6 106442024 106443258 POLR2A UCSC Txn Factor no Conserved 108541156
chr6 106442089 106442110 ZNF263 JASPAR yes 70410643
chr6 106442089 106442110 ZNF263 JASPAR yes 103999189
chr6 106442106 106442118 PROX1 JASPAR yes 70410644
chr6 106442106 106442118 PROX1 JASPAR yes 103999190
chr6 106442134 106442142 SP1 TRANSFAC yes 70410645
chr6 106442134 106442142 SP1 TRANSFAC yes 103999191
chr6 106442152 106442159 NFATC2 JASPAR yes 70410646
chr6 106442152 106442159 NFATC2 JASPAR yes 103999192
chr6 106442160 106442170 TEAD1 JASPAR yes 70410647
chr6 106442160 106442170 TEAD4 JASPAR yes 70410648
chr6 106442160 106442170 TEAD1 JASPAR yes 103999193
chr6 106442160 106442170 TEAD4 JASPAR yes 103999194
chr6 106442160 106442172 TEAD1 JASPAR yes 70410649
chr6 106442160 106442172 TEAD1 JASPAR yes 103999195
chr6 106442172 106442186 NR2F1 JASPAR yes 70410650
chr6 106442172 106442186 NR2F1 JASPAR yes 103999196
chr6 106442214 106442219 NFY TRANSFAC yes 70410651
chr6 106442214 106442219 NFY TRANSFAC yes 103999197
chr6 106442234 106442245 CEBPB JASPAR yes 70410652
chr6 106442234 106442245 CEBPB JASPAR yes 103999198
chr6 106442234 106442246 DBP JASPAR yes 70410653
chr6 106442234 106442246 HLF JASPAR yes 70410654
chr6 106442234 106442246 TEF JASPAR yes 70410655
chr6 106442234 106442246 DBP JASPAR yes 103999199
chr6 106442234 106442246 HLF JASPAR yes 103999200
chr6 106442234 106442246 TEF JASPAR yes 103999201
chr6 106442235 106442245 CEBPB JASPAR yes 70410656
chr6 106442235 106442245 CEBPD JASPAR yes 70410657
chr6 106442235 106442245 CEBPE JASPAR yes 70410658
chr6 106442235 106442245 CEBPG JASPAR yes 70410659
chr6 106442235 106442245 CEBPB JASPAR yes 103999202
chr6 106442235 106442245 CEBPD JASPAR yes 103999203
chr6 106442235 106442245 CEBPE JASPAR yes 103999204
chr6 106442235 106442245 CEBPG JASPAR yes 103999205
chr6 106442235 106442246 CEBPA JASPAR yes 70410660
chr6 106442235 106442246 CEBPA JASPAR yes 103999206
chr6 106442239 106442249 ALX3 JASPAR yes 70410661
chr6 106442239 106442249 GSX1 JASPAR yes 70410662
chr6 106442239 106442249 GSX2 JASPAR yes 70410663
chr6 106442239 106442249 HOXB2 JASPAR yes 70410664
chr6 106442239 106442249 HOXB3 JASPAR yes 70410665
chr6 106442239 106442249 MEOX1 JASPAR yes 70410666
chr6 106442239 106442249 MEOX2 JASPAR yes 70410667
chr6 106442239 106442249 MIXL1 JASPAR yes 70410668
chr6 106442239 106442249 ALX3 JASPAR yes 103999207
chr6 106442239 106442249 GSX1 JASPAR yes 103999208
chr6 106442239 106442249 GSX2 JASPAR yes 103999209
chr6 106442239 106442249 HOXB2 JASPAR yes 103999210
chr6 106442239 106442249 HOXB3 JASPAR yes 103999211
chr6 106442239 106442249 MEOX1 JASPAR yes 103999212
chr6 106442239 106442249 MEOX2 JASPAR yes 103999213
chr6 106442239 106442249 MIXL1 JASPAR yes 103999214
chr6 106442239 106442250 HOXA10 JASPAR yes 70410669
chr6 106442239 106442250 HOXA10 JASPAR yes 103999215
chr6 106442240 106442248 LMX1A JASPAR yes 70410670
chr6 106442240 106442248 LMX1B JASPAR yes 70410671
chr6 106442240 106442248 NKX6-1 JASPAR yes 70410672
chr6 106442240 106442248 NKX6-2 JASPAR yes 70410673
chr6 106442240 106442248 PDX1 JASPAR yes 70410674
chr6 106442240 106442248 VAX1 JASPAR yes 70410675
chr6 106442240 106442248 VAX2 JASPAR yes 70410676
chr6 106442240 106442248 VSX1 JASPAR yes 70410677
chr6 106442240 106442248 LMX1A JASPAR yes 103999216
chr6 106442240 106442248 LMX1B JASPAR yes 103999217
chr6 106442240 106442248 NKX6-1 JASPAR yes 103999218
chr6 106442240 106442248 NKX6-2 JASPAR yes 103999219
chr6 106442240 106442248 PDX1 JASPAR yes 103999220
chr6 106442240 106442248 VAX1 JASPAR yes 103999221
chr6 106442240 106442248 VAX2 JASPAR yes 103999222
chr6 106442240 106442248 VSX1 JASPAR yes 103999223
chr6 106442240 106442250 HOXD13 JASPAR yes 70410678
chr6 106442240 106442250 HOXD13 JASPAR yes 103999224
chr6 106442242 106442263 IRF1 JASPAR yes 70410679
chr6 106442242 106442263 IRF1 JASPAR yes 103999225
chr6 106442243 106442258 FOXP1 JASPAR yes 70410680
chr6 106442243 106442258 FOXP1 JASPAR yes 103999226
chr6 106442245 106442251 TBP TRANSFAC yes 70410681
chr6 106442245 106442251 TBP TRANSFAC yes 103999227
chr6 106442260 106442274 PLAG1 JASPAR yes 70410682
chr6 106442260 106442274 PLAG1 JASPAR yes 103999228
chr6 106442267 106442282 ZIC3 JASPAR yes 70410683
chr6 106442267 106442282 ZIC3 JASPAR yes 103999229
chr6 106442281 106442292 ELK4 JASPAR yes 70410684
chr6 106442281 106442292 ELK4 JASPAR yes 103999230
chr6 106442282 106442292 ELK1 JASPAR yes 70410685
chr6 106442282 106442292 ETS1 JASPAR yes 70410686
chr6 106442282 106442292 ETV1 JASPAR yes 70410687
chr6 106442282 106442292 ETV5 JASPAR yes 70410688
chr6 106442282 106442292 ETV6 JASPAR yes 70410689
chr6 106442282 106442292 FLI1 JASPAR yes 70410690
chr6 106442282 106442292 GABPA JASPAR yes 70410691
chr6 106442282 106442292 ELK1 JASPAR yes 103999231
chr6 106442282 106442292 ETS1 JASPAR yes 103999232
chr6 106442282 106442292 ETV1 JASPAR yes 103999233
chr6 106442282 106442292 ETV5 JASPAR yes 103999234
chr6 106442282 106442292 ETV6 JASPAR yes 103999235
chr6 106442282 106442292 FLI1 JASPAR yes 103999236
chr6 106442282 106442292 GABPA JASPAR yes 103999237
chr6 106442284 106442290 ETS1 JASPAR yes 70410692
chr6 106442284 106442290 SPI1 JASPAR yes 70410693
chr6 106442284 106442290 ETS1 JASPAR yes 103999238
chr6 106442284 106442290 SPI1 JASPAR yes 103999239
chr6 106442311 106442319 MEIS2 JASPAR yes 70410694
chr6 106442311 106442319 MEIS3 JASPAR yes 70410695
chr6 106442311 106442319 MEIS2 JASPAR yes 103999240
chr6 106442311 106442319 MEIS3 JASPAR yes 103999241
chr6 106442323 106442328 GATA2 JASPAR yes 70410696
chr6 106442323 106442328 GATA2 JASPAR yes 103999242
chr6 106442396 106442401 SP1 TRANSFAC yes 70410697
chr6 106442396 106442401 SP1 TRANSFAC yes 103999243
chr6 106442396 106442416 RREB1 JASPAR yes 70410698
chr6 106442396 106442416 RREB1 JASPAR yes 103999244
chr6 106442396 106442417 ZNF263 JASPAR yes 70410699
chr6 106442396 106442417 ZNF263 JASPAR yes 103999245
chr6 106442399 106442420 ZNF263 JASPAR yes 70410700
chr6 106442399 106442420 ZNF263 JASPAR yes 103999246
chr6 106442403 106442424 ZNF263 JASPAR yes 70410701
chr6 106442403 106442424 ZNF263 JASPAR yes 103999247
chr6 106442406 106442416 SP1 JASPAR yes 70410702
chr6 106442406 106442416 SP1 JASPAR yes 103999248
chr6 106442409 106442414 SP1 TRANSFAC yes 70410703
chr6 106442409 106442414 SP1 TRANSFAC yes 103999249
chr6 106442411 106442416 TFAP2A TRANSFAC yes 70410704
chr6 106442411 106442416 TFAP2A TRANSFAC yes 103999250
chr6 106442411 106442417 MZF1 JASPAR yes 70410705
chr6 106442411 106442417 MZF1 JASPAR yes 103999251
chr6 106442424 106442430 ETS1 JASPAR yes 70410706
chr6 106442424 106442430 ETS1 JASPAR yes 103999252
chr6 106442429 106442443 NR2F1 JASPAR yes 70410707
chr6 106442429 106442443 NR2F1 JASPAR yes 103999253
chr6 106442436 106442454 RARA JASPAR yes 70410708
chr6 106442436 106442454 RARA JASPAR yes 103999254
chr6 106442441 106442445 YY1 TRANSFAC yes 70410709
chr6 106442441 106442445 YY1 TRANSFAC yes 103999255
chr6 106442467 106442471 H4TF2 TRANSFAC yes 70410710
chr6 106442467 106442471 H4TF2 TRANSFAC yes 103999256
chr6 106442472 106442475 MYB TRANSFAC yes 70410711
chr6 106442472 106442475 MYB TRANSFAC yes 103999257
chr6 106442480 106442484 H4TF2 TRANSFAC yes 70410712
chr6 106442480 106442484 H4TF2 TRANSFAC yes 103999258
chr6 106442497 106442503 GATA3 JASPAR yes 70410713
chr6 106442497 106442503 GATA3 JASPAR yes 103999259
chr6 106442526 106442541 ZBTB33 JASPAR yes 70410714
chr6 106442526 106442541 ZBTB33 JASPAR yes 103999260
chr6 106442529 106442544 ZBTB33 JASPAR yes 70410715
chr6 106442529 106442544 ZBTB33 JASPAR yes 103999261
chr6 106442551 106442562 CEBPA JASPAR yes 70410716
chr6 106442551 106442562 CEBPA JASPAR yes 103999262
chr6 106442552 106442562 CEBPB JASPAR yes 70410717
chr6 106442552 106442562 CEBPD JASPAR yes 70410718
chr6 106442552 106442562 CEBPE JASPAR yes 70410719
chr6 106442552 106442562 CEBPG JASPAR yes 70410720
chr6 106442552 106442562 CEBPB JASPAR yes 103999263
chr6 106442552 106442562 CEBPD JASPAR yes 103999264
chr6 106442552 106442562 CEBPE JASPAR yes 103999265
chr6 106442552 106442562 CEBPG JASPAR yes 103999266
chr6 106442552 106442563 CEBPB JASPAR yes 70410721
chr6 106442552 106442563 CEBPB JASPAR yes 103999267
chr6 106442563 106442576 HSF2 JASPAR yes 70410722
chr6 106442563 106442576 HSF2 JASPAR yes 103999268
chr6 106442567 106442582 HSF1 JASPAR yes 70410723
chr6 106442567 106442582 HSF1 JASPAR yes 103999269
chr6 106442568 106442581 HSF4 JASPAR yes 70410724
chr6 106442568 106442581 HSF4 JASPAR yes 103999270
chr6 106442582 106442591 THAP1 JASPAR yes 70410725
chr6 106442582 106442591 THAP1 JASPAR yes 103999271
chr6 106442600 106442604 ESR1 TRANSFAC yes 70410726
chr6 106442600 106442604 ESR1 TRANSFAC yes 103999272
chr6 106442616 106442625 THAP1 JASPAR yes 70410727
chr6 106442616 106442625 THAP1 JASPAR yes 103999273
chr6 106442623 106442626 MYB TRANSFAC yes 70410728
chr6 106442623 106442626 MYB TRANSFAC yes 103999274
chr6 106442625 106442632 SPI1 JASPAR yes 70410729
chr6 106442625 106442632 SPI1 JASPAR yes 103999275
chr6 106442631 106442634 MYB TRANSFAC yes 70410730
chr6 106442631 106442634 MYB TRANSFAC yes 103999276
SNP sites on vista52978[chr6:106442094-106442641]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106442096 rs6568423 G C
EZH2 POLR2A ZNF263
9231000
chr6 106442098 rs185075435 G A
EZH2 POLR2A ZNF263
9231001
chr6 106442215 rs149213695 G A
EZH2 NFY POLR2A
9231002
chr6 106442237 rs527740637 T C
CEBPA CEBPB CEBPD CEBPE CEBPG DBP EZH2 HLF POLR2A TEF
9231003
chr6 106442246 rs11299498 TA T
ALX3 CEBPA DBP EZH2 FOXP1 GSX1 GSX2 HLF HOXA10 HOXB2 HOXB3 HOXD13 IRF1 LMX1A LMX1B MEOX1 MEOX2 MIXL1 NKX6-1 NKX6-2 PDX1 POLR2A TBP TEF VAX1 VAX2 VSX1
9231004
chr6 106442246 rs398002506 TA T
ALX3 CEBPA DBP EZH2 FOXP1 GSX1 GSX2 HLF HOXA10 HOXB2 HOXB3 HOXD13 IRF1 LMX1A LMX1B MEOX1 MEOX2 MIXL1 NKX6-1 NKX6-2 PDX1 POLR2A TBP TEF VAX1 VAX2 VSX1
9231005
chr6 106442269 rs76070991 C T
EZH2 PLAG1 POLR2A ZIC3
9231006
chr6 106442388 rs554194371 C CA
EZH2 POLR2A
9231007
chr6 106442426 rs564874559 T G
ETS1 EZH2 POLR2A
9231008
chr6 106442496 rs569129783 C G
EZH2 POLR2A
9231009
Genes possibly regulated by vista52978[chr6:106442094-106442641]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 0.89 0.97 6837 8446
Expression level of Genes
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miRNAs possibly regulated by vista52978[chr6:106442094-106442641]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results