EnhancerDB
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  3. vista52983[chr6:106537985-106538349]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52983[chr6:106537985-106538349]
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Tissue distribution of vista52983
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Transcription factor that possibly regulate vista52983[chr6:106537985-106538349]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106537819 106538293 CTCF UCSC Txn Factor no Conserved 108541163
chr6 106537903 106538200 RAD21 UCSC Txn Factor no Conserved 108541164
chr6 106538015 106538030 NFYB JASPAR yes 70410947
chr6 106538015 106538030 NFYB JASPAR yes 104007734
chr6 106538022 106538026 H1TF2 TRANSFAC yes 70410948
chr6 106538022 106538026 NFE TRANSFAC yes 70410949
chr6 106538022 106538026 SRF TRANSFAC yes 70410950
chr6 106538022 106538026 H1TF2 TRANSFAC yes 104007735
chr6 106538022 106538026 NFE TRANSFAC yes 104007736
chr6 106538022 106538026 SRF TRANSFAC yes 104007737
chr6 106538064 106538079 RUNX2 JASPAR yes 70410951
chr6 106538064 106538079 RUNX2 JASPAR yes 104007738
chr6 106538067 106538078 RUNX1 JASPAR yes 70410952
chr6 106538067 106538078 RUNX1 JASPAR yes 104007739
chr6 106538068 106538078 RUNX3 JASPAR yes 70410953
chr6 106538068 106538078 RUNX3 JASPAR yes 104007740
chr6 106538069 106538078 RUNX2 JASPAR yes 70410954
chr6 106538069 106538078 RUNX2 JASPAR yes 104007741
chr6 106538095 106538099 YY1 TRANSFAC yes 70410955
chr6 106538095 106538099 YY1 TRANSFAC yes 104007742
chr6 106538104 106538108 H1TF2 TRANSFAC yes 70410956
chr6 106538104 106538108 NFE TRANSFAC yes 70410957
chr6 106538104 106538108 SRF TRANSFAC yes 70410958
chr6 106538104 106538108 H1TF2 TRANSFAC yes 104007743
chr6 106538104 106538108 NFE TRANSFAC yes 104007744
chr6 106538104 106538108 SRF TRANSFAC yes 104007745
chr6 106538117 106538121 YY1 TRANSFAC yes 70410959
chr6 106538117 106538121 YY1 TRANSFAC yes 104007746
chr6 106538121 106538136 FOXP1 JASPAR yes 70410960
chr6 106538121 106538136 FOXP1 JASPAR yes 104007747
chr6 106538122 106538133 FOXP2 JASPAR yes 70410961
chr6 106538122 106538133 FOXP2 JASPAR yes 104007748
chr6 106538144 106538148 TEAD2 TRANSFAC yes 70410962
chr6 106538144 106538148 TEAD2 TRANSFAC yes 104007749
chr6 106538144 106538165 IRF1 JASPAR yes 70410963
chr6 106538144 106538165 IRF1 JASPAR yes 104007750
chr6 106538146 106538149 MYB TRANSFAC yes 70410964
chr6 106538146 106538149 MYB TRANSFAC yes 104007751
chr6 106538146 106538161 STAT2 JASPAR yes 70410965
chr6 106538146 106538161 STAT2 JASPAR yes 104007752
chr6 106538147 106538161 SPI1 JASPAR yes 70410966
chr6 106538147 106538161 SPIC JASPAR yes 70410967
chr6 106538147 106538161 SPI1 JASPAR yes 104007753
chr6 106538147 106538161 SPIC JASPAR yes 104007754
chr6 106538148 106538155 SPI1 JASPAR yes 70410968
chr6 106538148 106538155 SPI1 JASPAR yes 104007755
chr6 106538154 106538158 YY1 TRANSFAC yes 70410969
chr6 106538154 106538158 YY1 TRANSFAC yes 104007756
chr6 106538154 106538165 FOXB1 JASPAR yes 70410970
chr6 106538154 106538165 FOXB1 JASPAR yes 104007757
chr6 106538164 106538175 CEBPA JASPAR yes 70410971
chr6 106538164 106538175 CEBPA JASPAR yes 104007758
chr6 106538165 106538176 CEBPB JASPAR yes 70410972
chr6 106538165 106538176 CEBPB JASPAR yes 104007759
chr6 106538172 106538187 FOXP1 JASPAR yes 70410973
chr6 106538172 106538187 FOXP1 JASPAR yes 104007760
chr6 106538183 106538199 SOX4 JASPAR yes 70410974
chr6 106538183 106538199 SOX4 JASPAR yes 104007761
chr6 106538184 106538199 SOX21 JASPAR yes 70410975
chr6 106538184 106538199 SOX21 JASPAR yes 104007762
chr6 106538208 106538212 H4TF2 TRANSFAC yes 70410976
chr6 106538208 106538212 H4TF2 TRANSFAC yes 104007763
chr6 106538221 106538224 MYB TRANSFAC yes 70410977
chr6 106538221 106538224 MYB TRANSFAC yes 104007764
chr6 106538228 106538243 NR2C2 JASPAR yes 70410978
chr6 106538228 106538243 NR2C2 JASPAR yes 104007765
chr6 106538240 106538246 MYC TRANSFAC yes 70410979
chr6 106538240 106538246 MYC TRANSFAC yes 104007766
chr6 106538245 106538250 GATA2 JASPAR yes 70410980
chr6 106538245 106538250 GATA2 JASPAR yes 104007767
chr6 106538250 106538254 YY1 TRANSFAC yes 70410981
chr6 106538250 106538254 YY1 TRANSFAC yes 104007768
chr6 106538257 106538261 NFE TRANSFAC yes 70410982
chr6 106538257 106538261 NFE TRANSFAC yes 104007769
chr6 106538257 106538262 GATA1 TRANSFAC yes 70410983
chr6 106538257 106538262 GATA1 TRANSFAC yes 104007770
chr6 106538257 106538263 GATA3 JASPAR yes 70410984
chr6 106538257 106538263 GATA3 JASPAR yes 104007771
chr6 106538265 106538269 YY1 TRANSFAC yes 70410985
chr6 106538265 106538269 YY1 TRANSFAC yes 104007772
chr6 106538269 106538272 MYB TRANSFAC yes 70410986
chr6 106538269 106538272 MYB TRANSFAC yes 104007773
chr6 106538290 106538295 GATA2 JASPAR yes 70410987
chr6 106538290 106538295 GATA2 JASPAR yes 104007774
chr6 106538311 106538322 CDX2 JASPAR yes 70410988
chr6 106538311 106538322 CDX2 JASPAR yes 104007775
SNP sites on vista52983[chr6:106537985-106538349]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106538222 rs9384600 T C
CTCF MYB
9231623
chr6 106538225 rs529341342 C G
CTCF
9231624
chr6 106538250 rs111251145 C T
CTCF GATA2 YY1
9231625
chr6 106538280 rs6924535 G T
CTCF
9231626
chr6 106538330 rs141509075 A G no 9231627
Genes possibly regulated by vista52983[chr6:106537985-106538349]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 0.89 0.97 6837 96210
Expression level of Genes
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miRNAs possibly regulated by vista52983[chr6:106537985-106538349]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results