EnhancerDB
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  3. vista52984[chr6:106540002-106540199]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52984[chr6:106540002-106540199]
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Tissue distribution of vista52984
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Transcription factor that possibly regulate vista52984[chr6:106540002-106540199]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106540170 106540540 REST UCSC Txn Factor no Conserved 108541165
chr6 106539995 106540005 TEAD1 JASPAR yes 70410989
chr6 106539995 106540005 TEAD4 JASPAR yes 70410990
chr6 106539995 106540005 TEAD1 JASPAR yes 104008013
chr6 106539995 106540005 TEAD4 JASPAR yes 104008014
chr6 106539999 106540014 FOXP1 JASPAR yes 70410991
chr6 106539999 106540014 FOXP1 JASPAR yes 104008015
chr6 106539999 106540020 IRF1 JASPAR yes 70410992
chr6 106539999 106540020 IRF1 JASPAR yes 104008016
chr6 106540003 106540018 FOXP1 JASPAR yes 70410993
chr6 106540003 106540018 FOXP1 JASPAR yes 104008017
chr6 106540004 106540019 FOXP1 JASPAR yes 70410994
chr6 106540004 106540019 FOXP1 JASPAR yes 104008018
chr6 106540004 106540025 IRF1 JASPAR yes 70410995
chr6 106540004 106540025 IRF1 JASPAR yes 104008019
chr6 106540005 106540020 FOXP1 JASPAR yes 70410996
chr6 106540005 106540020 FOXP1 JASPAR yes 104008020
chr6 106540005 106540026 IRF1 JASPAR yes 70410997
chr6 106540005 106540026 IRF1 JASPAR yes 104008021
chr6 106540006 106540021 FOXP1 JASPAR yes 70410998
chr6 106540006 106540021 FOXP1 JASPAR yes 104008022
chr6 106540006 106540027 IRF1 JASPAR yes 70410999
chr6 106540006 106540027 IRF1 JASPAR yes 104008023
chr6 106540007 106540022 FOXP1 JASPAR yes 70411000
chr6 106540007 106540022 FOXP1 JASPAR yes 104008024
chr6 106540007 106540028 IRF1 JASPAR yes 70411001
chr6 106540007 106540028 IRF1 JASPAR yes 104008025
chr6 106540008 106540023 FOXP1 JASPAR yes 70411002
chr6 106540008 106540023 FOXP1 JASPAR yes 104008026
chr6 106540010 106540025 FOXP1 JASPAR yes 70411003
chr6 106540010 106540025 FOXP1 JASPAR yes 104008027
chr6 106540011 106540026 STAT2 JASPAR yes 70411004
chr6 106540011 106540026 STAT2 JASPAR yes 104008028
chr6 106540012 106540027 FOXP1 JASPAR yes 70411005
chr6 106540012 106540027 FOXP1 JASPAR yes 104008029
chr6 106540014 106540026 FOXC2 JASPAR yes 70411006
chr6 106540014 106540026 FOXC2 JASPAR yes 104008030
chr6 106540015 106540026 FOXP2 JASPAR yes 70411007
chr6 106540015 106540026 FOXP2 JASPAR yes 104008031
chr6 106540035 106540049 GATA2 JASPAR yes 70411008
chr6 106540035 106540049 GATA2 JASPAR yes 104008032
chr6 106540053 106540057 YY1 TRANSFAC yes 70411009
chr6 106540053 106540057 YY1 TRANSFAC yes 104008033
chr6 106540062 106540082 RREB1 JASPAR yes 70411010
chr6 106540062 106540082 RREB1 JASPAR yes 104008034
chr6 106540083 106540091 MEIS2 JASPAR yes 70411011
chr6 106540083 106540091 MEIS3 JASPAR yes 70411012
chr6 106540083 106540091 MEIS2 JASPAR yes 104008035
chr6 106540083 106540091 MEIS3 JASPAR yes 104008036
chr6 106540084 106540088 NFE TRANSFAC yes 70411013
chr6 106540084 106540088 NFE TRANSFAC yes 104008037
chr6 106540084 106540091 MEIS1 JASPAR yes 70411014
chr6 106540084 106540091 MEIS1 JASPAR yes 104008038
chr6 106540107 106540119 IRF1 JASPAR yes 70411015
chr6 106540107 106540119 IRF1 JASPAR yes 104008039
chr6 106540110 106540115 MYB TRANSFAC yes 70411016
chr6 106540110 106540115 MYB TRANSFAC yes 104008040
chr6 106540134 106540143 ELK4 JASPAR yes 70411017
chr6 106540134 106540143 ELK4 JASPAR yes 104008041
chr6 106540134 106540144 ELK1 JASPAR yes 70411018
chr6 106540134 106540144 ELK3 JASPAR yes 70411019
chr6 106540134 106540144 ERG JASPAR yes 70411020
chr6 106540134 106540144 ETV1 JASPAR yes 70411021
chr6 106540134 106540144 ETV5 JASPAR yes 70411022
chr6 106540134 106540144 FEV JASPAR yes 70411023
chr6 106540134 106540144 ELK1 JASPAR yes 104008042
chr6 106540134 106540144 ELK3 JASPAR yes 104008043
chr6 106540134 106540144 ERG JASPAR yes 104008044
chr6 106540134 106540144 ETV1 JASPAR yes 104008045
chr6 106540134 106540144 ETV5 JASPAR yes 104008046
chr6 106540134 106540144 FEV JASPAR yes 104008047
chr6 106540134 106540145 ELK4 JASPAR yes 70411024
chr6 106540134 106540145 ELK4 JASPAR yes 104008048
chr6 106540136 106540142 ETS1 JASPAR yes 70411025
chr6 106540136 106540142 SPI1 JASPAR yes 70411026
chr6 106540136 106540142 ETS1 JASPAR yes 104008049
chr6 106540136 106540142 SPI1 JASPAR yes 104008050
chr6 106540156 106540170 ZIC1 JASPAR yes 70411027
chr6 106540156 106540170 ZIC1 JASPAR yes 104008051
chr6 106540159 106540164 SP1 TRANSFAC yes 70411028
chr6 106540159 106540164 SP1 TRANSFAC yes 104008052
chr6 106540159 106540165 SP1 TRANSFAC yes 70411029
chr6 106540159 106540165 SP1 TRANSFAC yes 104008053
chr6 106540168 106540180 TEF JASPAR yes 70411030
chr6 106540168 106540180 TEF JASPAR yes 104008054
chr6 106540175 106540178 MYB TRANSFAC yes 70411031
chr6 106540175 106540178 MYB TRANSFAC yes 104008055
chr6 106540180 106540195 RUNX2 JASPAR yes 70411032
chr6 106540180 106540195 RUNX2 JASPAR yes 104008056
SNP sites on vista52984[chr6:106540002-106540199]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106540007 rs76647609 A G
FOXP1 IRF1
9231647
chr6 106540017 rs529216509 A C
FOXC2 FOXP1 FOXP2 IRF1 STAT2
9231648
chr6 106540023 rs11152963 C A
FOXC2 FOXP1 FOXP2 IRF1 STAT2
9231649
chr6 106540043 rs34583115 TATC T
GATA2
9231650
chr6 106540043 rs5878867 TATC T
GATA2
9231651
chr6 106540065 rs191269488 C G
RREB1
9231652
Genes possibly regulated by vista52984[chr6:106540002-106540199]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 0.89 0.97 6837 94193
Expression level of Genes
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miRNAs possibly regulated by vista52984[chr6:106540002-106540199]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results