EnhancerDB
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  3. vista52988[chr6:106565443-106565616]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52988[chr6:106565443-106565616]
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Tissue distribution of vista52988
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Transcription factor that possibly regulate vista52988[chr6:106565443-106565616]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106565541 106565860 RUNX3 UCSC Txn Factor no Conserved 108541177
chr6 106565452 106565458 TCF4 TRANSFAC yes 70411150
chr6 106565452 106565458 TCF4 TRANSFAC yes 104010585
chr6 106565498 106565512 PLAG1 JASPAR yes 70411151
chr6 106565498 106565512 PLAG1 JASPAR yes 104010586
chr6 106565505 106565514 HIC2 JASPAR yes 70411152
chr6 106565505 106565514 HIC2 JASPAR yes 104010587
chr6 106565507 106565521 CREB3L1 JASPAR yes 70411153
chr6 106565507 106565521 CREB3L1 JASPAR yes 104010588
chr6 106565508 106565512 LFA1 TRANSFAC yes 70411154
chr6 106565508 106565512 LFA1 TRANSFAC yes 104010589
chr6 106565508 106565518 MAX JASPAR yes 70411155
chr6 106565508 106565518 MAX JASPAR yes 104010590
chr6 106565508 106565519 USF2 JASPAR yes 70411156
chr6 106565508 106565519 USF2 JASPAR yes 104010591
chr6 106565508 106565520 HES5 JASPAR yes 70411157
chr6 106565508 106565520 HES7 JASPAR yes 70411158
chr6 106565508 106565520 HES5 JASPAR yes 104010592
chr6 106565508 106565520 HES7 JASPAR yes 104010593
chr6 106565509 106565519 BHLHE40 JASPAR yes 70411159
chr6 106565509 106565519 HEY1 JASPAR yes 70411160
chr6 106565509 106565519 HEY2 JASPAR yes 70411161
chr6 106565509 106565519 MAX JASPAR yes 70411162
chr6 106565509 106565519 MLX JASPAR yes 70411163
chr6 106565509 106565519 MNT JASPAR yes 70411164
chr6 106565509 106565519 TFE3 JASPAR yes 70411165
chr6 106565509 106565519 TFEB JASPAR yes 70411166
chr6 106565509 106565519 BHLHE40 JASPAR yes 104010594
chr6 106565509 106565519 HEY1 JASPAR yes 104010595
chr6 106565509 106565519 HEY2 JASPAR yes 104010596
chr6 106565509 106565519 MAX JASPAR yes 104010597
chr6 106565509 106565519 MLX JASPAR yes 104010598
chr6 106565509 106565519 MNT JASPAR yes 104010599
chr6 106565509 106565519 TFE3 JASPAR yes 104010600
chr6 106565509 106565519 TFEB JASPAR yes 104010601
chr6 106565511 106565516 MYC TRANSFAC yes 70411167
chr6 106565511 106565516 USF1 TRANSFAC yes 70411168
chr6 106565511 106565516 USF2 TRANSFAC yes 70411169
chr6 106565511 106565516 MYC TRANSFAC yes 104010602
chr6 106565511 106565516 USF1 TRANSFAC yes 104010603
chr6 106565511 106565516 USF2 TRANSFAC yes 104010604
chr6 106565511 106565518 USF1 JASPAR yes 70411170
chr6 106565511 106565518 USF1 JASPAR yes 104010605
chr6 106565516 106565521 SP1 TRANSFAC yes 70411171
chr6 106565516 106565521 SP1 TRANSFAC yes 104010606
chr6 106565555 106565570 FOXP1 JASPAR yes 70411172
chr6 106565555 106565570 FOXP1 JASPAR yes 104010607
chr6 106565556 106565571 FOXP1 JASPAR yes 70411173
chr6 106565556 106565571 FOXP1 JASPAR yes 104010608
chr6 106565557 106565563 TBP TRANSFAC yes 70411174
chr6 106565557 106565563 TBP TRANSFAC yes 104010609
chr6 106565557 106565572 FOXP1 JASPAR yes 70411175
chr6 106565557 106565572 FOXP1 JASPAR yes 104010610
chr6 106565558 106565573 FOXP1 JASPAR yes 70411176
chr6 106565558 106565573 FOXP1 JASPAR yes 104010611
chr6 106565595 106565608 SMAD2 JASPAR yes 70411177
chr6 106565595 106565608 SMAD2 JASPAR yes 104010612
chr6 106565597 106565604 MEIS1 JASPAR yes 70411178
chr6 106565597 106565604 MEIS1 JASPAR yes 104010613
chr6 106565597 106565605 MEIS2 JASPAR yes 70411179
chr6 106565597 106565605 MEIS2 JASPAR yes 104010614
chr6 106565604 106565611 SPI1 JASPAR yes 70411180
chr6 106565604 106565611 SPI1 JASPAR yes 104010615
chr6 106565604 106565612 FEV JASPAR yes 70411181
chr6 106565604 106565612 FEV JASPAR yes 104010616
chr6 106565606 106565611 ETS2 TRANSFAC yes 70411182
chr6 106565606 106565611 ETS2 TRANSFAC yes 104010617
chr6 106565609 106565615 ETS1 JASPAR yes 70411183
chr6 106565609 106565615 SPI1 JASPAR yes 70411184
chr6 106565609 106565615 ETS1 JASPAR yes 104010618
chr6 106565609 106565615 SPI1 JASPAR yes 104010619
SNP sites on vista52988[chr6:106565443-106565616]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106565465 rs117060225 G A no 9231823
chr6 106565515 rs143980481 G A
BHLHE40 CREB3L1 HES5 HES7 HEY1 HEY2 MAX MLX MNT MYC TFE3 TFEB USF1 USF2
9231824
chr6 106565519 rs576185702 C T
BHLHE40 CREB3L1 HES5 HES7 HEY1 HEY2 MAX MLX MNT SP1 TFE3 TFEB USF2
9231825
Genes possibly regulated by vista52988[chr6:106565443-106565616]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 0.89 0.97 6837 68752
Expression level of Genes
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miRNAs possibly regulated by vista52988[chr6:106565443-106565616]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results