EnhancerDB
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  3. vista52996[chr6:106611101-106611647]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52996[chr6:106611101-106611647]
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Tissue distribution of vista52996
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Transcription factor that possibly regulate vista52996[chr6:106611101-106611647]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106611364 106612759 POLR2A UCSC Txn Factor no Conserved 108541180
chr6 106611364 106612759 POLR2A UCSC Txn Factor no Conserved 108541181
chr6 106611364 106612759 POLR2A UCSC Txn Factor no Conserved 108541182
chr6 106611123 106611133 HOXD11 JASPAR yes 70411502
chr6 106611123 106611133 HOXD13 JASPAR yes 70411503
chr6 106611123 106611133 HOXD11 JASPAR yes 104016572
chr6 106611123 106611133 HOXD13 JASPAR yes 104016573
chr6 106611123 106611134 HOXA10 JASPAR yes 70411504
chr6 106611123 106611134 HOXC12 JASPAR yes 70411505
chr6 106611123 106611134 HOXA10 JASPAR yes 104016574
chr6 106611123 106611134 HOXC12 JASPAR yes 104016575
chr6 106611127 106611131 TEAD2 TRANSFAC yes 70411506
chr6 106611127 106611131 TEAD2 TRANSFAC yes 104016576
chr6 106611129 106611132 MYB TRANSFAC yes 70411507
chr6 106611129 106611132 MYB TRANSFAC yes 104016577
chr6 106611149 106611152 MYB TRANSFAC yes 70411508
chr6 106611149 106611152 MYB TRANSFAC yes 104016578
chr6 106611155 106611159 YY1 TRANSFAC yes 70411509
chr6 106611155 106611159 YY1 TRANSFAC yes 104016579
chr6 106611165 106611180 NR2C2 JASPAR yes 70411510
chr6 106611165 106611180 NR2C2 JASPAR yes 104016580
chr6 106611171 106611180 THAP1 JASPAR yes 70411511
chr6 106611171 106611180 THAP1 JASPAR yes 104016581
chr6 106611172 106611185 TFAP2A JASPAR yes 70411512
chr6 106611172 106611185 TFAP2B JASPAR yes 70411513
chr6 106611172 106611185 TFAP2A JASPAR yes 104016582
chr6 106611172 106611185 TFAP2B JASPAR yes 104016583
chr6 106611179 106611189 SREBF1 JASPAR yes 70411514
chr6 106611179 106611189 SREBF2 JASPAR yes 70411515
chr6 106611179 106611189 SREBF1 JASPAR yes 104016584
chr6 106611179 106611189 SREBF2 JASPAR yes 104016585
chr6 106611202 106611211 SP1 TRANSFAC yes 70411516
chr6 106611202 106611211 SP1 TRANSFAC yes 104016586
chr6 106611203 106611213 SP1 JASPAR yes 70411517
chr6 106611203 106611213 SP1 JASPAR yes 104016587
chr6 106611205 106611220 NR2C2 JASPAR yes 70411518
chr6 106611205 106611220 NR2C2 JASPAR yes 104016588
chr6 106611227 106611232 TFAP2A TRANSFAC yes 70411519
chr6 106611227 106611232 TFAP2A TRANSFAC yes 104016589
chr6 106611227 106611233 MZF1 JASPAR yes 70411520
chr6 106611227 106611233 MZF1 JASPAR yes 104016590
chr6 106611228 106611238 GSC2 JASPAR yes 70411521
chr6 106611228 106611238 GSC JASPAR yes 70411522
chr6 106611228 106611238 GSC2 JASPAR yes 104016591
chr6 106611228 106611238 GSC JASPAR yes 104016592
chr6 106611229 106611237 OTX1 JASPAR yes 70411523
chr6 106611229 106611237 OTX2 JASPAR yes 70411524
chr6 106611229 106611237 RHOXF1 JASPAR yes 70411525
chr6 106611229 106611237 OTX1 JASPAR yes 104016593
chr6 106611229 106611237 OTX2 JASPAR yes 104016594
chr6 106611229 106611237 RHOXF1 JASPAR yes 104016595
chr6 106611229 106611238 PITX3 JASPAR yes 70411526
chr6 106611229 106611238 PITX3 JASPAR yes 104016596
chr6 106611236 106611246 NFATC3 JASPAR yes 70411527
chr6 106611236 106611246 NFATC3 JASPAR yes 104016597
chr6 106611236 106611256 TP53 JASPAR yes 70411528
chr6 106611236 106611256 TP53 JASPAR yes 104016598
chr6 106611237 106611244 NFATC2 JASPAR yes 70411529
chr6 106611237 106611244 NFATC2 JASPAR yes 104016599
chr6 106611241 106611245 H1TF2 TRANSFAC yes 70411530
chr6 106611241 106611245 NFE TRANSFAC yes 70411531
chr6 106611241 106611245 SRF TRANSFAC yes 70411532
chr6 106611241 106611245 H1TF2 TRANSFAC yes 104016600
chr6 106611241 106611245 NFE TRANSFAC yes 104016601
chr6 106611241 106611245 SRF TRANSFAC yes 104016602
chr6 106611263 106611275 IRF1 JASPAR yes 70411533
chr6 106611263 106611275 IRF1 JASPAR yes 104016603
chr6 106611279 106611299 PPARG JASPAR yes 70411534
chr6 106611279 106611299 PPARG JASPAR yes 104016604
chr6 106611283 106611297 NR2F1 JASPAR yes 70411535
chr6 106611283 106611297 NR2F1 JASPAR yes 104016605
chr6 106611290 106611293 MYB TRANSFAC yes 70411536
chr6 106611290 106611293 MYB TRANSFAC yes 104016606
chr6 106611292 106611302 FIGLA JASPAR yes 70411537
chr6 106611292 106611302 TCF3 JASPAR yes 70411538
chr6 106611292 106611302 FIGLA JASPAR yes 104016607
chr6 106611292 106611302 TCF3 JASPAR yes 104016608
chr6 106611293 106611302 SNAI2 JASPAR yes 70411539
chr6 106611293 106611302 SNAI2 JASPAR yes 104016609
chr6 106611294 106611299 USF2 TRANSFAC yes 70411540
chr6 106611294 106611299 USF2 TRANSFAC yes 104016610
chr6 106611298 106611308 NKX2-3 JASPAR yes 70411541
chr6 106611298 106611308 NKX2-3 JASPAR yes 104016611
chr6 106611299 106611308 NKX2-8 JASPAR yes 70411542
chr6 106611299 106611308 NKX2-8 JASPAR yes 104016612
chr6 106611305 106611326 IRF1 JASPAR yes 70411543
chr6 106611305 106611326 IRF1 JASPAR yes 104016613
chr6 106611309 106611324 PRDM1 JASPAR yes 70411544
chr6 106611309 106611324 PRDM1 JASPAR yes 104016614
chr6 106611320 106611324 LFA1 TRANSFAC yes 70411545
chr6 106611320 106611324 LFA1 TRANSFAC yes 104016615
chr6 106611338 106611349 FLI1 JASPAR yes 70411546
chr6 106611338 106611349 FLI1 JASPAR yes 104016616
chr6 106611339 106611352 ELF1 JASPAR yes 70411547
chr6 106611339 106611352 ELF1 JASPAR yes 104016617
chr6 106611340 106611347 SPI1 JASPAR yes 70411548
chr6 106611340 106611347 SPI1 JASPAR yes 104016618
chr6 106611340 106611348 FEV JASPAR yes 70411549
chr6 106611340 106611348 FEV JASPAR yes 104016619
chr6 106611342 106611347 ETS2 TRANSFAC yes 70411550
chr6 106611342 106611347 ETS2 TRANSFAC yes 104016620
chr6 106611350 106611357 JUN TRANSFAC yes 70411551
chr6 106611350 106611357 SP1 TRANSFAC yes 70411552
chr6 106611350 106611357 JUN TRANSFAC yes 104016621
chr6 106611350 106611357 SP1 TRANSFAC yes 104016622
chr6 106611376 106611389 SMAD2 JASPAR yes 70411553
chr6 106611376 106611389 SMAD2 JASPAR yes 104016623
chr6 106611398 106611418 ESR1 JASPAR yes 70411554
chr6 106611398 106611418 ESR1 JASPAR yes 104016624
chr6 106611402 106611420 ESR2 JASPAR yes 70411555
chr6 106611402 106611420 ESR2 JASPAR yes 104016625
chr6 106611411 106611426 HNF4A JASPAR yes 70411556
chr6 106611411 106611426 HNF4A JASPAR yes 104016626
chr6 106611412 106611426 NR2F1 JASPAR yes 70411557
chr6 106611412 106611426 NR2F1 JASPAR yes 104016627
chr6 106611412 106611427 HNF4G JASPAR yes 70411558
chr6 106611412 106611427 HNF4G JASPAR yes 104016628
chr6 106611417 106611428 ESRRB JASPAR yes 70411559
chr6 106611417 106611428 ESRRB JASPAR yes 104016629
chr6 106611440 106611450 NFATC3 JASPAR yes 70411560
chr6 106611440 106611450 NFATC3 JASPAR yes 104016630
chr6 106611440 106611461 ZNF263 JASPAR yes 70411561
chr6 106611440 106611461 ZNF263 JASPAR yes 104016631
chr6 106611442 106611449 NFATC2 JASPAR yes 70411562
chr6 106611442 106611449 NFATC2 JASPAR yes 104016632
chr6 106611451 106611465 SPIC JASPAR yes 70411563
chr6 106611451 106611465 SPIC JASPAR yes 104016633
chr6 106611457 106611462 ETS2 TRANSFAC yes 70411564
chr6 106611457 106611462 ETS2 TRANSFAC yes 104016634
chr6 106611511 106611526 PRDM1 JASPAR yes 70411565
chr6 106611511 106611526 PRDM1 JASPAR yes 104016635
chr6 106611536 106611548 TFAP2A JASPAR yes 70411566
chr6 106611536 106611548 TFAP2B JASPAR yes 70411567
chr6 106611536 106611548 TFAP2C JASPAR yes 70411568
chr6 106611536 106611548 TFAP2A JASPAR yes 104016636
chr6 106611536 106611548 TFAP2B JASPAR yes 104016637
chr6 106611536 106611548 TFAP2C JASPAR yes 104016638
chr6 106611536 106611551 TFAP2A JASPAR yes 70411569
chr6 106611536 106611551 TFAP2C JASPAR yes 70411570
chr6 106611536 106611551 TFAP2A JASPAR yes 104016639
chr6 106611536 106611551 TFAP2C JASPAR yes 104016640
chr6 106611537 106611548 EBF1 JASPAR yes 70411571
chr6 106611537 106611548 TFAP2A JASPAR yes 70411572
chr6 106611537 106611548 TFAP2B JASPAR yes 70411573
chr6 106611537 106611548 EBF1 JASPAR yes 104016641
chr6 106611537 106611548 TFAP2A JASPAR yes 104016642
chr6 106611537 106611548 TFAP2B JASPAR yes 104016643
chr6 106611538 106611547 TFAP2A JASPAR yes 70411574
chr6 106611538 106611547 TFAP2A JASPAR yes 104016644
chr6 106611573 106611586 ELF1 JASPAR yes 70411575
chr6 106611573 106611586 ELF1 JASPAR yes 104016645
chr6 106611574 106611586 EHF JASPAR yes 70411576
chr6 106611574 106611586 ELF1 JASPAR yes 70411577
chr6 106611574 106611586 ELF4 JASPAR yes 70411578
chr6 106611574 106611586 EHF JASPAR yes 104016646
chr6 106611574 106611586 ELF1 JASPAR yes 104016647
chr6 106611574 106611586 ELF4 JASPAR yes 104016648
chr6 106611574 106611587 ELF3 JASPAR yes 70411579
chr6 106611574 106611587 ELF3 JASPAR yes 104016649
chr6 106611575 106611586 ELF5 JASPAR yes 70411580
chr6 106611575 106611586 ELF5 JASPAR yes 104016650
chr6 106611576 106611586 ERF JASPAR yes 70411581
chr6 106611576 106611586 ETS1 JASPAR yes 70411582
chr6 106611576 106611586 ETV6 JASPAR yes 70411583
chr6 106611576 106611586 GABPA JASPAR yes 70411584
chr6 106611576 106611586 ERF JASPAR yes 104016651
chr6 106611576 106611586 ETS1 JASPAR yes 104016652
chr6 106611576 106611586 ETV6 JASPAR yes 104016653
chr6 106611576 106611586 GABPA JASPAR yes 104016654
chr6 106611576 106611587 ELK4 JASPAR yes 70411585
chr6 106611576 106611587 FLI1 JASPAR yes 70411586
chr6 106611576 106611587 ELK4 JASPAR yes 104016655
chr6 106611576 106611587 FLI1 JASPAR yes 104016656
chr6 106611577 106611585 EHF JASPAR yes 70411587
chr6 106611577 106611585 FEV JASPAR yes 70411588
chr6 106611577 106611585 EHF JASPAR yes 104016657
chr6 106611577 106611585 FEV JASPAR yes 104016658
chr6 106611578 106611585 SPI1 JASPAR yes 70411589
chr6 106611578 106611585 SPI1 JASPAR yes 104016659
chr6 106611586 106611604 MAFF JASPAR yes 70411590
chr6 106611586 106611604 MAFF JASPAR yes 104016660
chr6 106611587 106611602 MAFK JASPAR yes 70411591
chr6 106611587 106611602 MAFK JASPAR yes 104016661
chr6 106611591 106611602 NRL JASPAR yes 70411592
chr6 106611591 106611602 NRL JASPAR yes 104016662
chr6 106611599 106611612 NR2F1 JASPAR yes 70411593
chr6 106611599 106611612 NR2F1 JASPAR yes 104016663
chr6 106611600 106611618 ESR1 JASPAR yes 70411594
chr6 106611600 106611618 ESR2 JASPAR yes 70411595
chr6 106611600 106611618 ESR1 JASPAR yes 104016664
chr6 106611600 106611618 ESR2 JASPAR yes 104016665
chr6 106611602 106611617 ESR2 JASPAR yes 70411596
chr6 106611602 106611617 ESR2 JASPAR yes 104016666
chr6 106611602 106611622 ESR1 JASPAR yes 70411597
chr6 106611602 106611622 ESR1 JASPAR yes 104016667
chr6 106611603 106611607 ESR1 TRANSFAC yes 70411598
chr6 106611603 106611607 ESR1 TRANSFAC yes 104016668
chr6 106611607 106611612 ETS2 TRANSFAC yes 70411599
chr6 106611607 106611612 ETS2 TRANSFAC yes 104016669
chr6 106611615 106611619 NFE TRANSFAC yes 70411600
chr6 106611615 106611619 NFE TRANSFAC yes 104016670
chr6 106611616 106611621 GATA2 JASPAR yes 70411601
chr6 106611616 106611621 GATA2 JASPAR yes 104016671
chr6 106611620 106611626 SOX10 JASPAR yes 70411602
chr6 106611620 106611626 SOX10 JASPAR yes 104016672
chr6 106611639 106611643 YY1 TRANSFAC yes 70411603
chr6 106611639 106611643 YY1 TRANSFAC yes 104016673
chr6 106611639 106611649 NFATC3 JASPAR yes 70411604
chr6 106611639 106611649 NFATC3 JASPAR yes 104016674
SNP sites on vista52996[chr6:106611101-106611647]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106611153 rs148183050 C T no 9232356
chr6 106611191 rs568903263 A C,G no 9232357
chr6 106611250 rs568326305 T G
TP53
9232358
chr6 106611412 rs2355708 G A
ESR1 ESR2 HNF4A HNF4G NR2F1 POLR2A
9232359
chr6 106611466 rs372126829 C T
POLR2A
9232360
chr6 106611538 rs528852164 C T
EBF1 POLR2A TFAP2A TFAP2B TFAP2C
9232361
chr6 106611588 rs17587088 A C
MAFF MAFK POLR2A
9232362
chr6 106611625 rs147318749 G T
POLR2A SOX10
9232363
chr6 106611646 rs141051876 C T
NFATC3 POLR2A
9232364
Genes possibly regulated by vista52996[chr6:106611101-106611647]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 0.89 0.97 6837 23094
Expression level of Genes
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miRNAs possibly regulated by vista52996[chr6:106611101-106611647]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results