EnhancerDB
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  3. vista52999[chr6:106616078-106616322]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista52999[chr6:106616078-106616322]
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Tissue distribution of vista52999
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Transcription factor that possibly regulate vista52999[chr6:106616078-106616322]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106616078 106616090 TFAP2B JASPAR yes 70411736
chr6 106616078 106616090 TFAP2C JASPAR yes 70411737
chr6 106616078 106616090 TFAP2B JASPAR yes 104017255
chr6 106616078 106616090 TFAP2C JASPAR yes 104017256
chr6 106616091 106616112 ZNF263 JASPAR yes 70411738
chr6 106616091 106616112 ZNF263 JASPAR yes 104017257
chr6 106616095 106616116 ZNF263 JASPAR yes 70411739
chr6 106616095 106616116 ZNF263 JASPAR yes 104017258
chr6 106616101 106616122 ZNF263 JASPAR yes 70411740
chr6 106616101 106616122 ZNF263 JASPAR yes 104017259
chr6 106616109 106616119 MZF1 JASPAR yes 70411741
chr6 106616109 106616119 MZF1 JASPAR yes 104017260
chr6 106616122 106616131 SNAI2 JASPAR yes 70411742
chr6 106616122 106616131 SNAI2 JASPAR yes 104017261
chr6 106616122 106616132 ID4 JASPAR yes 70411743
chr6 106616122 106616132 ID4 JASPAR yes 104017262
chr6 106616127 106616133 ZNF354C JASPAR yes 70411744
chr6 106616127 106616133 ZNF354C JASPAR yes 104017263
chr6 106616129 106616134 GATA2 JASPAR yes 70411745
chr6 106616129 106616134 GATA2 JASPAR yes 104017264
chr6 106616149 106616154 SP1 TRANSFAC yes 70411746
chr6 106616149 106616154 SP1 TRANSFAC yes 104017265
chr6 106616153 106616157 H4TF2 TRANSFAC yes 70411747
chr6 106616153 106616157 H4TF2 TRANSFAC yes 104017266
chr6 106616168 106616180 PBX1 JASPAR yes 70411748
chr6 106616168 106616180 PBX1 JASPAR yes 104017267
chr6 106616169 106616173 ESR1 TRANSFAC yes 70411749
chr6 106616169 106616173 ESR1 TRANSFAC yes 104017268
chr6 106616193 106616211 NFYA JASPAR yes 70411750
chr6 106616193 106616211 NFYA JASPAR yes 104017269
chr6 106616196 106616212 NFYA JASPAR yes 70411751
chr6 106616196 106616212 NFYA JASPAR yes 104017270
chr6 106616199 106616212 DUXA JASPAR yes 70411752
chr6 106616199 106616212 DUXA JASPAR yes 104017271
chr6 106616199 106616214 NFYB JASPAR yes 70411753
chr6 106616199 106616214 NFYB JASPAR yes 104017272
chr6 106616200 106616211 DUX4 JASPAR yes 70411754
chr6 106616200 106616211 DUX4 JASPAR yes 104017273
chr6 106616201 106616206 NFY TRANSFAC yes 70411755
chr6 106616201 106616206 NFY TRANSFAC yes 104017274
chr6 106616213 106616218 SP1 TRANSFAC yes 70411756
chr6 106616213 106616218 SP1 TRANSFAC yes 104017275
chr6 106616213 106616222 HIC2 JASPAR yes 70411757
chr6 106616213 106616222 HIC2 JASPAR yes 104017276
chr6 106616216 106616220 LFA1 TRANSFAC yes 70411758
chr6 106616216 106616220 LFA1 TRANSFAC yes 104017277
chr6 106616217 106616227 BHLHE22 JASPAR yes 70411759
chr6 106616217 106616227 OLIG3 JASPAR yes 70411760
chr6 106616217 106616227 BHLHE22 JASPAR yes 104017278
chr6 106616217 106616227 OLIG3 JASPAR yes 104017279
chr6 106616222 106616232 SREBF1 JASPAR yes 70411761
chr6 106616222 106616232 SREBF2 JASPAR yes 70411762
chr6 106616222 106616232 SREBF1 JASPAR yes 104017280
chr6 106616222 106616232 SREBF2 JASPAR yes 104017281
chr6 106616222 106616236 JUN JASPAR yes 70411763
chr6 106616222 106616236 JUN JASPAR yes 104017282
chr6 106616230 106616245 NFYB JASPAR yes 70411764
chr6 106616230 106616245 NFYB JASPAR yes 104017283
chr6 106616232 106616248 NFYA JASPAR yes 70411765
chr6 106616232 106616248 NFYA JASPAR yes 104017284
chr6 106616233 106616251 NFYA JASPAR yes 70411766
chr6 106616233 106616251 NFYA JASPAR yes 104017285
chr6 106616237 106616241 H1TF2 TRANSFAC yes 70411767
chr6 106616237 106616241 NFE TRANSFAC yes 70411768
chr6 106616237 106616241 SRF TRANSFAC yes 70411769
chr6 106616237 106616241 H1TF2 TRANSFAC yes 104017286
chr6 106616237 106616241 NFE TRANSFAC yes 104017287
chr6 106616237 106616241 SRF TRANSFAC yes 104017288
chr6 106616266 106616281 STAT1 JASPAR yes 70411770
chr6 106616266 106616281 STAT1 JASPAR yes 104017289
chr6 106616268 106616279 STAT1 JASPAR yes 70411771
chr6 106616268 106616279 STAT3 JASPAR yes 70411772
chr6 106616268 106616279 STAT1 JASPAR yes 104017290
chr6 106616268 106616279 STAT3 JASPAR yes 104017291
chr6 106616269 106616277 STAT6 TRANSFAC yes 70411773
chr6 106616269 106616277 STAT6 TRANSFAC yes 104017292
chr6 106616301 106616304 MYB TRANSFAC yes 70411774
chr6 106616301 106616304 MYB TRANSFAC yes 104017293
SNP sites on vista52999[chr6:106616078-106616322]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106616113 rs11751098 C T
MZF1 ZNF263
9232405
chr6 106616197 rs537140600 C A
NFYA
9232406
chr6 106616226 rs116739836 G A
BHLHE22 JUN OLIG3 SREBF1 SREBF2
9232407
chr6 106616246 rs574272259 G T
NFYA
9232408
chr6 106616257 rs543210537 C T no 9232409
chr6 106616258 rs367745621 G A no 9232410
chr6 106616268 rs573416322 G C
STAT1 STAT3
9232411
chr6 106616270 rs545722350 T C
STAT1 STAT3 STAT6
9232412
chr6 106616274 rs565129154 G T
STAT1 STAT3 STAT6
9232413
chr6 106616277 rs530841149 A G
STAT1 STAT3 STAT6
9232414
chr6 106616280 rs141935413 A C
STAT1
9232415
Genes possibly regulated by vista52999[chr6:106616078-106616322]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106534195 106557814 + PRDM1 ENSG00000057657.10 106534195 0.89 0.97 6837 18117
Expression level of Genes
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miRNAs possibly regulated by vista52999[chr6:106616078-106616322]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results