EnhancerDB
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  3. vista53[chr1:1951401-1951779]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53[chr1:1951401-1951779]
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Tissue distribution of vista53
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Transcription factor that possibly regulate vista53[chr1:1951401-1951779]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1951414 1951418 NFE TRANSFAC yes 118215614
chr1 1951420 1951434 GLIS3 JASPAR yes 118215615
chr1 1951427 1951445 ESR1 JASPAR yes 118215616
chr1 1951430 1951435 SP1 TRANSFAC yes 118215617
chr1 1951480 1951484 LFA1 TRANSFAC yes 118215618
chr1 1951500 1951509 SNAI2 JASPAR yes 118215619
chr1 1951500 1951510 TCF3 JASPAR yes 118215620
chr1 1951513 1951533 ESR1 JASPAR yes 118215621
chr1 1951515 1951525 ID4 JASPAR yes 118215622
chr1 1951515 1951525 TCF4 JASPAR yes 118215623
chr1 1951516 1951534 ESR1 JASPAR yes 118215624
chr1 1951518 1951533 TFAP2A JASPAR yes 118215625
chr1 1951518 1951533 TFAP2C JASPAR yes 118215626
chr1 1951519 1951530 ESRRA JASPAR yes 118215627
chr1 1951521 1951533 TFAP2A JASPAR yes 118215628
chr1 1951521 1951533 TFAP2B JASPAR yes 118215629
chr1 1951521 1951533 TFAP2C JASPAR yes 118215630
chr1 1951522 1951537 RFX5 JASPAR yes 118215631
chr1 1951526 1951541 RUNX2 JASPAR yes 118215632
chr1 1951546 1951552 ZNF354C JASPAR yes 118215633
chr1 1951549 1951554 H4TF1 TRANSFAC yes 118215634
chr1 1951549 1951560 CEBPB JASPAR yes 118215635
chr1 1951554 1951564 HMBOX1 JASPAR yes 118215636
chr1 1951556 1951559 MYB TRANSFAC yes 118215637
chr1 1951556 1951571 MEF2A JASPAR yes 118215638
chr1 1951557 1951572 MEF2C JASPAR yes 118215639
chr1 1951560 1951564 YY1 TRANSFAC yes 118215640
chr1 1951566 1951572 MAZ TRANSFAC yes 118215641
chr1 1951569 1951580 NFKB1 JASPAR yes 118215642
chr1 1951570 1951580 NFKB1 JASPAR yes 118215643
chr1 1951573 1951587 EBF1 JASPAR yes 118215644
chr1 1951574 1951585 EBF1 JASPAR yes 118215645
chr1 1951575 1951581 MZF1 JASPAR yes 118215646
chr1 1951580 1951593 ELF1 JASPAR yes 118215647
chr1 1951580 1951601 ZNF263 JASPAR yes 118215648
chr1 1951583 1951604 ZNF263 JASPAR yes 118215649
chr1 1951584 1951589 ETS2 TRANSFAC yes 118215650
chr1 1951586 1951607 ZNF263 JASPAR yes 118215651
chr1 1951601 1951612 NFKB1 JASPAR yes 118215652
chr1 1951604 1951617 TFAP2A JASPAR yes 118215653
chr1 1951604 1951617 TFAP2C JASPAR yes 118215654
chr1 1951604 1951618 GLIS2 JASPAR yes 118215655
chr1 1951604 1951618 ZIC1 JASPAR yes 118215656
chr1 1951604 1951619 ZIC3 JASPAR yes 118215657
chr1 1951604 1951619 ZIC4 JASPAR yes 118215658
chr1 1951605 1951618 TFAP2A JASPAR yes 118215659
chr1 1951605 1951618 TFAP2B JASPAR yes 118215660
chr1 1951605 1951618 TFAP2C JASPAR yes 118215661
chr1 1951606 1951618 TFAP2A JASPAR yes 118215662
chr1 1951606 1951618 TFAP2B JASPAR yes 118215663
chr1 1951606 1951618 TFAP2C JASPAR yes 118215664
chr1 1951608 1951617 TFAP2A JASPAR yes 118215665
chr1 1951640 1951650 ZNF740 JASPAR yes 118215666
chr1 1951649 1951670 REST JASPAR yes 118215667
chr1 1951650 1951669 REST JASPAR yes 118215668
chr1 1951654 1951665 EBF1 JASPAR yes 118215669
chr1 1951658 1951663 TFAP2A TRANSFAC yes 118215670
chr1 1951658 1951664 MZF1 JASPAR yes 118215671
chr1 1951682 1951701 RFX2 JASPAR yes 118215672
chr1 1951709 1951714 SP1 TRANSFAC yes 118215673
chr1 1951749 1951753 YY1 TRANSFAC yes 118215674
SNP sites on vista53[chr1:1951401-1951779]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 1951431 rs573136542 G A,C
ESR1 GLIS3 SP1
10339
chr1 1951562 rs548352389 A G
HMBOX1 MEF2A MEF2C YY1
10340
chr1 1951617 rs374632775 C T
GLIS2 TFAP2A TFAP2B TFAP2C ZIC1 ZIC3 ZIC4
10341
Genes possibly regulated by vista53[chr1:1951401-1951779]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1853396 1935276 - C1orf222 ENSG00000142609.13 1935276 0.98 1.0 55 83875
chr1 1950780 1962192 + GABRD ENSG00000187730.6 1950780 0.89 1.0 56 99379
chr1 1981909 2116834 + PRKCZ ENSG00000067606.11 1981909 0.87 1.0 57 69870
Expression level of Genes
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miRNAs possibly regulated by vista53[chr1:1951401-1951779]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results