EnhancerDB
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  3. vista53004[chr6:106950504-106950708]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53004[chr6:106950504-106950708]
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Tissue distribution of vista53004
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Transcription factor that possibly regulate vista53004[chr6:106950504-106950708]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106950510 106950695 FOS UCSC Txn Factor no Conserved 108541190
chr6 106950487 106950508 IRF1 JASPAR yes 70411942
chr6 106950487 106950508 IRF1 JASPAR yes 104045817
chr6 106950491 106950506 PRDM1 JASPAR yes 70411943
chr6 106950491 106950506 PRDM1 JASPAR yes 104045818
chr6 106950491 106950509 NR3C1 JASPAR yes 70411944
chr6 106950491 106950509 NR3C1 JASPAR yes 104045819
chr6 106950504 106950509 TFAP2A TRANSFAC yes 70411945
chr6 106950504 106950509 TFAP2A TRANSFAC yes 104045820
chr6 106950504 106950510 MZF1 JASPAR yes 70411946
chr6 106950504 106950510 MZF1 JASPAR yes 104045821
chr6 106950515 106950521 TCF1 TRANSFAC yes 70411947
chr6 106950515 106950521 TCF1 TRANSFAC yes 104045822
chr6 106950550 106950561 FOS JASPAR yes 70411948
chr6 106950550 106950561 FOS JASPAR yes 104045823
chr6 106950552 106950563 BATF JASPAR yes 70411949
chr6 106950552 106950563 BATF JASPAR yes 104045824
chr6 106950557 106950567 EMX2 JASPAR yes 70411950
chr6 106950557 106950567 EVX1 JASPAR yes 70411951
chr6 106950557 106950567 EVX2 JASPAR yes 70411952
chr6 106950557 106950567 LHX2 JASPAR yes 70411953
chr6 106950557 106950567 MEOX1 JASPAR yes 70411954
chr6 106950557 106950567 NOTO JASPAR yes 70411955
chr6 106950557 106950567 EMX2 JASPAR yes 104045825
chr6 106950557 106950567 EVX1 JASPAR yes 104045826
chr6 106950557 106950567 EVX2 JASPAR yes 104045827
chr6 106950557 106950567 LHX2 JASPAR yes 104045828
chr6 106950557 106950567 MEOX1 JASPAR yes 104045829
chr6 106950557 106950567 NOTO JASPAR yes 104045830
chr6 106950558 106950566 LBX1 JASPAR yes 70411956
chr6 106950558 106950566 PDX1 JASPAR yes 70411957
chr6 106950558 106950566 VAX1 JASPAR yes 70411958
chr6 106950558 106950566 VAX2 JASPAR yes 70411959
chr6 106950558 106950566 VSX1 JASPAR yes 70411960
chr6 106950558 106950566 VSX2 JASPAR yes 70411961
chr6 106950558 106950566 LBX1 JASPAR yes 104045831
chr6 106950558 106950566 PDX1 JASPAR yes 104045832
chr6 106950558 106950566 VAX1 JASPAR yes 104045833
chr6 106950558 106950566 VAX2 JASPAR yes 104045834
chr6 106950558 106950566 VSX1 JASPAR yes 104045835
chr6 106950558 106950566 VSX2 JASPAR yes 104045836
chr6 106950558 106950568 POU6F2 JASPAR yes 70411962
chr6 106950558 106950568 POU6F2 JASPAR yes 104045837
chr6 106950595 106950606 ETV2 JASPAR yes 70411963
chr6 106950595 106950606 ETV2 JASPAR yes 104045838
chr6 106950596 106950606 ETS1 JASPAR yes 70411964
chr6 106950596 106950606 ETS1 JASPAR yes 104045839
chr6 106950619 106950630 CEBPA JASPAR yes 70411965
chr6 106950619 106950630 CEBPA JASPAR yes 104045840
chr6 106950619 106950631 DBP JASPAR yes 70411966
chr6 106950619 106950631 HLF JASPAR yes 70411967
chr6 106950619 106950631 TEF JASPAR yes 70411968
chr6 106950619 106950631 DBP JASPAR yes 104045841
chr6 106950619 106950631 HLF JASPAR yes 104045842
chr6 106950619 106950631 TEF JASPAR yes 104045843
chr6 106950620 106950630 CEBPB JASPAR yes 70411969
chr6 106950620 106950630 CEBPD JASPAR yes 70411970
chr6 106950620 106950630 CEBPE JASPAR yes 70411971
chr6 106950620 106950630 CEBPG JASPAR yes 70411972
chr6 106950620 106950630 CEBPB JASPAR yes 104045844
chr6 106950620 106950630 CEBPD JASPAR yes 104045845
chr6 106950620 106950630 CEBPE JASPAR yes 104045846
chr6 106950620 106950630 CEBPG JASPAR yes 104045847
chr6 106950620 106950631 CEBPB JASPAR yes 70411973
chr6 106950620 106950631 CEBPB JASPAR yes 104045848
chr6 106950624 106950634 ALX3 JASPAR yes 70411974
chr6 106950624 106950634 EMX1 JASPAR yes 70411975
chr6 106950624 106950634 HOXB2 JASPAR yes 70411976
chr6 106950624 106950634 HOXB3 JASPAR yes 70411977
chr6 106950624 106950634 MEOX2 JASPAR yes 70411978
chr6 106950624 106950634 MNX1 JASPAR yes 70411979
chr6 106950624 106950634 ALX3 JASPAR yes 104045849
chr6 106950624 106950634 EMX1 JASPAR yes 104045850
chr6 106950624 106950634 HOXB2 JASPAR yes 104045851
chr6 106950624 106950634 HOXB3 JASPAR yes 104045852
chr6 106950624 106950634 MEOX2 JASPAR yes 104045853
chr6 106950624 106950634 MNX1 JASPAR yes 104045854
chr6 106950625 106950633 LMX1A JASPAR yes 70411980
chr6 106950625 106950633 LMX1B JASPAR yes 70411981
chr6 106950625 106950633 NKX6-1 JASPAR yes 70411982
chr6 106950625 106950633 NKX6-2 JASPAR yes 70411983
chr6 106950625 106950633 PDX1 JASPAR yes 70411984
chr6 106950625 106950633 VAX1 JASPAR yes 70411985
chr6 106950625 106950633 VAX2 JASPAR yes 70411986
chr6 106950625 106950633 VSX1 JASPAR yes 70411987
chr6 106950625 106950633 LMX1A JASPAR yes 104045855
chr6 106950625 106950633 LMX1B JASPAR yes 104045856
chr6 106950625 106950633 NKX6-1 JASPAR yes 104045857
chr6 106950625 106950633 NKX6-2 JASPAR yes 104045858
chr6 106950625 106950633 PDX1 JASPAR yes 104045859
chr6 106950625 106950633 VAX1 JASPAR yes 104045860
chr6 106950625 106950633 VAX2 JASPAR yes 104045861
chr6 106950625 106950633 VSX1 JASPAR yes 104045862
chr6 106950631 106950636 ETS2 TRANSFAC yes 70411988
chr6 106950631 106950636 ETS2 TRANSFAC yes 104045863
chr6 106950649 106950660 FOXB1 JASPAR yes 70411989
chr6 106950649 106950660 FOXB1 JASPAR yes 104045864
chr6 106950650 106950654 YY1 TRANSFAC yes 70411990
chr6 106950650 106950654 YY1 TRANSFAC yes 104045865
chr6 106950655 106950661 SOX10 JASPAR yes 70411991
chr6 106950655 106950661 SOX10 JASPAR yes 104045866
chr6 106950658 106950670 GLI2 JASPAR yes 70411992
chr6 106950658 106950670 GLI2 JASPAR yes 104045867
chr6 106950676 106950681 ETS2 TRANSFAC yes 70411993
chr6 106950676 106950681 ETS2 TRANSFAC yes 104045868
chr6 106950690 106950705 MEF2C JASPAR yes 70411994
chr6 106950690 106950705 MEF2C JASPAR yes 104045869
chr6 106950691 106950706 MEF2A JASPAR yes 70411995
chr6 106950691 106950706 MEF2A JASPAR yes 104045870
chr6 106950694 106950700 TBP TRANSFAC yes 70411996
chr6 106950694 106950700 TBP TRANSFAC yes 104045871
chr6 106950705 106950720 TFAP2C JASPAR yes 70411997
chr6 106950705 106950720 TFAP2C JASPAR yes 104045872
SNP sites on vista53004[chr6:106950504-106950708]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106950504 rs150969167 T C
IRF1 MZF1 NR3C1 PRDM1 TFAP2A
9235042
chr6 106950536 rs574206158 A C
FOS
9235043
chr6 106950688 rs75944631 G A
FOS
9235044
chr6 106950695 rs11386592 T TA
FOS MEF2A MEF2C TBP
9235045
chr6 106950695 rs398110526 T TA
FOS MEF2A MEF2C TBP
9235046
chr6 106950699 rs11966303 A G
MEF2A MEF2C TBP
9235047
Genes possibly regulated by vista53004[chr6:106950504-106950708]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106959730 107018326 + AIM1 ENSG00000112297.10 106959730 0.86 0.99 6839 90978
Expression level of Genes
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miRNAs possibly regulated by vista53004[chr6:106950504-106950708]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results