EnhancerDB
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  3. vista53005[chr6:106970547-106970941]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53005[chr6:106970547-106970941]
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Tissue distribution of vista53005
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Transcription factor that possibly regulate vista53005[chr6:106970547-106970941]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 106970557 106970569 PBX1 JASPAR yes 70411998
chr6 106970573 106970581 GATA3 JASPAR yes 70411999
chr6 106970607 106970628 REST JASPAR yes 70412000
chr6 106970666 106970670 NFE TRANSFAC yes 70412001
chr6 106970679 106970692 ATF4 JASPAR yes 70412002
chr6 106970693 106970704 CEBPA JASPAR yes 70412003
chr6 106970709 106970719 RELA JASPAR yes 70412004
chr6 106970734 106970747 POU2F2 JASPAR yes 70412005
chr6 106970740 106970751 USF2 JASPAR yes 70412006
chr6 106970747 106970752 H4TF1 TRANSFAC yes 70412007
chr6 106970750 106970757 TBP TRANSFAC yes 70412008
chr6 106970750 106970757 TFIID TRANSFAC yes 70412009
chr6 106970760 106970767 TBP TRANSFAC yes 70412010
chr6 106970760 106970767 TFIID TRANSFAC yes 70412011
chr6 106970767 106970779 IRF1 JASPAR yes 70412012
chr6 106970767 106970781 IRF7 JASPAR yes 70412013
chr6 106970767 106970781 IRF8 JASPAR yes 70412014
chr6 106970767 106970782 IRF9 JASPAR yes 70412015
chr6 106970774 106970787 ZBTB18 JASPAR yes 70412016
chr6 106970779 106970791 FOXI1 JASPAR yes 70412017
chr6 106970802 106970810 FOXL1 JASPAR yes 70412018
chr6 106970812 106970824 PBX1 JASPAR yes 70412019
chr6 106970818 106970837 REST JASPAR yes 70412020
chr6 106970835 106970841 TCF4 TRANSFAC yes 70412021
chr6 106970835 106970847 FOXI1 JASPAR yes 70412022
chr6 106970856 106970860 NFE TRANSFAC yes 70412023
chr6 106970866 106970877 PHOX2A JASPAR yes 70412024
chr6 106970866 106970877 PROP1 JASPAR yes 70412025
chr6 106970873 106970885 MEF2A JASPAR yes 70412026
chr6 106970873 106970885 MEF2B JASPAR yes 70412027
chr6 106970873 106970885 MEF2D JASPAR yes 70412028
chr6 106970874 106970884 MEF2A JASPAR yes 70412029
chr6 106970875 106970879 TEAD2 TRANSFAC yes 70412030
chr6 106970875 106970880 TBP TRANSFAC yes 70412031
chr6 106970875 106970881 TMF TRANSFAC yes 70412032
chr6 106970876 106970890 POU4F1 JASPAR yes 70412033
chr6 106970876 106970892 POU4F2 JASPAR yes 70412034
chr6 106970876 106970892 POU4F3 JASPAR yes 70412035
chr6 106970879 106970897 MAFF JASPAR yes 70412036
chr6 106970881 106970892 NRL JASPAR yes 70412037
chr6 106970881 106970896 MAFK JASPAR yes 70412038
chr6 106970884 106970895 STAT3 JASPAR yes 70412039
chr6 106970894 106970905 HOXC12 JASPAR yes 70412040
chr6 106970895 106970905 HOXD11 JASPAR yes 70412041
chr6 106970904 106970925 IRF1 JASPAR yes 70412042
chr6 106970915 106970935 PPARG JASPAR yes 70412043
chr6 106970916 106970936 PPARG JASPAR yes 70412044
chr6 106970918 106970932 MTF1 JASPAR yes 70412045
SNP sites on vista53005[chr6:106970547-106970941]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 106970687 rs139415054 G T
ATF4
9235251
chr6 106970719 rs111289756 C T
RELA
9235252
chr6 106970720 rs541924923 A C no 9235253
chr6 106970791 rs34550542 G A
FOXI1
9235254
chr6 106970808 rs190082626 T C
FOXL1
9235255
chr6 106970906 rs142942066 A G
IRF1
9235256
Genes possibly regulated by vista53005[chr6:106970547-106970941]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 106959730 107018326 + AIM1 ENSG00000112297.10 106959730 0.86 0.99 6839 89183
Expression level of Genes
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miRNAs possibly regulated by vista53005[chr6:106970547-106970941]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results