EnhancerDB
  1. Home
  2. Enhancers
  3. vista53025[chr6:108141852-108141997]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53025[chr6:108141852-108141997]
Back to top
Tissue distribution of vista53025
Back to top
Transcription factor that possibly regulate vista53025[chr6:108141852-108141997]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 108141846 108141860 STAT1 JASPAR yes 70412909
chr6 108141846 108141860 STAT1 JASPAR yes 104141130
chr6 108141846 108141861 STAT2 JASPAR yes 70412910
chr6 108141846 108141861 STAT2 JASPAR yes 104141131
chr6 108141847 108141859 IRF1 JASPAR yes 70412911
chr6 108141847 108141859 IRF1 JASPAR yes 104141132
chr6 108141848 108141869 IRF1 JASPAR yes 70412912
chr6 108141848 108141869 IRF1 JASPAR yes 104141133
chr6 108141850 108141855 MYB TRANSFAC yes 70412913
chr6 108141850 108141855 MYB TRANSFAC yes 104141134
chr6 108141870 108141886 SOX8 JASPAR yes 70412914
chr6 108141870 108141886 SOX8 JASPAR yes 104141135
chr6 108141897 108141910 SMAD2 JASPAR yes 70412915
chr6 108141897 108141910 SMAD2 JASPAR yes 104141136
chr6 108141936 108141952 SOX4 JASPAR yes 70412916
chr6 108141936 108141952 SOX4 JASPAR yes 104141137
chr6 108141937 108141952 SOX21 JASPAR yes 70412917
chr6 108141937 108141952 SOX21 JASPAR yes 104141138
chr6 108141940 108141954 NR2F1 JASPAR yes 70412918
chr6 108141940 108141954 NR2F1 JASPAR yes 104141139
chr6 108141951 108141957 MZF1 JASPAR yes 70412919
chr6 108141951 108141957 MZF1 JASPAR yes 104141140
SNP sites on vista53025[chr6:108141852-108141997]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 108141907 rs76758701 C A,G
SMAD2
9243940
chr6 108141919 rs147072650 G A no 9243941
chr6 108141947 rs553705055 AG A
NR2F1 SOX21 SOX4
9243942
Genes possibly regulated by vista53025[chr6:108141852-108141997]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 108025308 108145521 - SCML4 ENSG00000146285.9 108145521 0.96 0.93 6846 96476
Expression level of Genes
Back to top
miRNAs possibly regulated by vista53025[chr6:108141852-108141997]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results