EnhancerDB
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  3. vista53026[chr6:108143478-108143727]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53026[chr6:108143478-108143727]
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Tissue distribution of vista53026
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Transcription factor that possibly regulate vista53026[chr6:108143478-108143727]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 108143475 108143490 FOXP1 JASPAR yes 70412920
chr6 108143475 108143490 FOXP1 JASPAR yes 104141446
chr6 108143476 108143487 FOXP2 JASPAR yes 70412921
chr6 108143476 108143487 FOXP2 JASPAR yes 104141447
chr6 108143478 108143489 FOXA1 JASPAR yes 70412922
chr6 108143478 108143489 FOXA1 JASPAR yes 104141448
chr6 108143479 108143494 RUNX2 JASPAR yes 70412923
chr6 108143479 108143494 RUNX2 JASPAR yes 104141449
chr6 108143486 108143496 SREBF1 JASPAR yes 70412924
chr6 108143486 108143496 SREBF1 JASPAR yes 104141450
chr6 108143503 108143512 ZEB1 JASPAR yes 70412925
chr6 108143503 108143512 ZEB1 JASPAR yes 104141451
chr6 108143523 108143536 SMAD2 JASPAR yes 70412926
chr6 108143523 108143536 SMAD2 JASPAR yes 104141452
chr6 108143529 108143544 NR2C2 JASPAR yes 70412927
chr6 108143529 108143544 NR2C2 JASPAR yes 104141453
chr6 108143530 108143545 PRDM1 JASPAR yes 70412928
chr6 108143530 108143545 PRDM1 JASPAR yes 104141454
chr6 108143558 108143572 STAT1 JASPAR yes 70412929
chr6 108143558 108143572 STAT1 JASPAR yes 104141455
chr6 108143558 108143573 STAT2 JASPAR yes 70412930
chr6 108143558 108143573 STAT2 JASPAR yes 104141456
chr6 108143560 108143581 IRF1 JASPAR yes 70412931
chr6 108143560 108143581 IRF1 JASPAR yes 104141457
chr6 108143562 108143577 IRF9 JASPAR yes 70412932
chr6 108143562 108143577 IRF9 JASPAR yes 104141458
chr6 108143563 108143577 IRF7 JASPAR yes 70412933
chr6 108143563 108143577 IRF8 JASPAR yes 70412934
chr6 108143563 108143577 IRF7 JASPAR yes 104141459
chr6 108143563 108143577 IRF8 JASPAR yes 104141460
chr6 108143564 108143578 STAT1 JASPAR yes 70412935
chr6 108143564 108143578 STAT1 JASPAR yes 104141461
chr6 108143564 108143579 PRDM1 JASPAR yes 70412936
chr6 108143564 108143579 STAT2 JASPAR yes 70412937
chr6 108143564 108143579 PRDM1 JASPAR yes 104141462
chr6 108143564 108143579 STAT2 JASPAR yes 104141463
chr6 108143564 108143582 IRF2 JASPAR yes 70412938
chr6 108143564 108143582 IRF2 JASPAR yes 104141464
chr6 108143565 108143577 IRF1 JASPAR yes 70412939
chr6 108143565 108143577 IRF1 JASPAR yes 104141465
chr6 108143586 108143591 H4TF1 TRANSFAC yes 70412940
chr6 108143586 108143591 H4TF1 TRANSFAC yes 104141466
chr6 108143587 108143598 E2F6 JASPAR yes 70412941
chr6 108143587 108143598 E2F6 JASPAR yes 104141467
chr6 108143603 108143609 HiNF-A TRANSFAC yes 70412942
chr6 108143603 108143609 HiNF-A TRANSFAC yes 104141468
chr6 108143603 108143623 RREB1 JASPAR yes 70412943
chr6 108143603 108143623 RREB1 JASPAR yes 104141469
chr6 108143606 108143626 RREB1 JASPAR yes 70412944
chr6 108143606 108143626 RREB1 JASPAR yes 104141470
chr6 108143623 108143629 HiNF-A TRANSFAC yes 70412945
chr6 108143623 108143629 HiNF-A TRANSFAC yes 104141471
chr6 108143643 108143664 IRF1 JASPAR yes 70412946
chr6 108143643 108143664 IRF1 JASPAR yes 104141472
chr6 108143654 108143668 ONECUT3 JASPAR yes 70412947
chr6 108143654 108143668 ONECUT3 JASPAR yes 104141473
chr6 108143656 108143671 FOXP1 JASPAR yes 70412948
chr6 108143656 108143671 FOXP1 JASPAR yes 104141474
chr6 108143657 108143666 SRY JASPAR yes 70412949
chr6 108143657 108143666 SRY JASPAR yes 104141475
chr6 108143657 108143668 FOXP2 JASPAR yes 70412950
chr6 108143657 108143668 FOXP2 JASPAR yes 104141476
chr6 108143685 108143689 YY1 TRANSFAC yes 70412951
chr6 108143685 108143689 YY1 TRANSFAC yes 104141477
chr6 108143688 108143709 IRF1 JASPAR yes 70412952
chr6 108143688 108143709 IRF1 JASPAR yes 104141478
chr6 108143689 108143710 IRF1 JASPAR yes 70412953
chr6 108143689 108143710 IRF1 JASPAR yes 104141479
chr6 108143694 108143709 FOXP1 JASPAR yes 70412954
chr6 108143694 108143709 FOXP1 JASPAR yes 104141480
chr6 108143695 108143716 IRF1 JASPAR yes 70412955
chr6 108143695 108143716 IRF1 JASPAR yes 104141481
chr6 108143696 108143711 FOXP1 JASPAR yes 70412956
chr6 108143696 108143711 FOXP1 JASPAR yes 104141482
chr6 108143696 108143717 IRF1 JASPAR yes 70412957
chr6 108143696 108143717 IRF1 JASPAR yes 104141483
chr6 108143697 108143712 FOXP1 JASPAR yes 70412958
chr6 108143697 108143712 FOXP1 JASPAR yes 104141484
chr6 108143697 108143718 IRF1 JASPAR yes 70412959
chr6 108143697 108143718 IRF1 JASPAR yes 104141485
chr6 108143701 108143722 IRF1 JASPAR yes 70412960
chr6 108143701 108143722 IRF1 JASPAR yes 104141486
chr6 108143702 108143717 FOXP1 JASPAR yes 70412961
chr6 108143702 108143717 FOXP1 JASPAR yes 104141487
chr6 108143702 108143723 IRF1 JASPAR yes 70412962
chr6 108143702 108143723 IRF1 JASPAR yes 104141488
chr6 108143706 108143727 IRF1 JASPAR yes 70412963
chr6 108143706 108143727 IRF1 JASPAR yes 104141489
chr6 108143707 108143722 FOXP1 JASPAR yes 70412964
chr6 108143707 108143722 FOXP1 JASPAR yes 104141490
chr6 108143709 108143724 FOXP1 JASPAR yes 70412965
chr6 108143709 108143724 FOXP1 JASPAR yes 104141491
chr6 108143711 108143726 FOXP1 JASPAR yes 70412966
chr6 108143711 108143726 FOXP1 JASPAR yes 104141492
chr6 108143712 108143727 FOXP1 JASPAR yes 70412967
chr6 108143712 108143727 FOXP1 JASPAR yes 104141493
chr6 108143727 108143741 IRF7 JASPAR yes 70412968
chr6 108143727 108143741 IRF7 JASPAR yes 104141494
SNP sites on vista53026[chr6:108143478-108143727]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 108143572 rs542432133 G A
IRF1 IRF2 IRF7 IRF8 IRF9 PRDM1 STAT1 STAT2
9243965
chr6 108143597 rs116132306 G A
E2F6
9243966
chr6 108143602 rs9486728 G A no 9243967
chr6 108143712 rs10677944 CTT C
FOXP1 IRF1
9243968
chr6 108143712 rs398002553 CTT C
FOXP1 IRF1
9243969
chr6 108143712 rs869131616 CTT C
FOXP1 IRF1
9243970
Genes possibly regulated by vista53026[chr6:108143478-108143727]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 108025308 108145521 - SCML4 ENSG00000146285.9 108145521 0.96 0.93 6846 98206
Expression level of Genes
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miRNAs possibly regulated by vista53026[chr6:108143478-108143727]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results