EnhancerDB
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  3. vista53027[chr6:108144215-108144549]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53027[chr6:108144215-108144549]
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Tissue distribution of vista53027
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Transcription factor that possibly regulate vista53027[chr6:108144215-108144549]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 108144215 108144230 FOXP1 JASPAR yes 70412969
chr6 108144215 108144230 FOXP1 JASPAR yes 104141572
chr6 108144215 108144236 IRF1 JASPAR yes 70412970
chr6 108144215 108144236 IRF1 JASPAR yes 104141573
chr6 108144216 108144231 FOXP1 JASPAR yes 70412971
chr6 108144216 108144231 FOXP1 JASPAR yes 104141574
chr6 108144217 108144223 TBP TRANSFAC yes 70412972
chr6 108144217 108144223 TBP TRANSFAC yes 104141575
chr6 108144219 108144234 PRDM1 JASPAR yes 70412973
chr6 108144219 108144234 STAT2 JASPAR yes 70412974
chr6 108144219 108144234 PRDM1 JASPAR yes 104141576
chr6 108144219 108144234 STAT2 JASPAR yes 104141577
chr6 108144250 108144255 GATA2 JASPAR yes 70412975
chr6 108144250 108144255 GATA2 JASPAR yes 104141578
chr6 108144265 108144277 YY1 JASPAR yes 70412976
chr6 108144265 108144277 YY1 JASPAR yes 104141579
chr6 108144273 108144280 SPIB JASPAR yes 70412977
chr6 108144273 108144280 SPIB JASPAR yes 104141580
chr6 108144284 108144305 IRF1 JASPAR yes 70412978
chr6 108144284 108144305 IRF1 JASPAR yes 104141581
chr6 108144286 108144301 IRF9 JASPAR yes 70412979
chr6 108144286 108144301 IRF9 JASPAR yes 104141582
chr6 108144288 108144303 STAT2 JASPAR yes 70412980
chr6 108144288 108144303 STAT2 JASPAR yes 104141583
chr6 108144289 108144304 FOXP1 JASPAR yes 70412981
chr6 108144289 108144304 FOXP1 JASPAR yes 104141584
chr6 108144304 108144308 TEAD2 TRANSFAC yes 70412982
chr6 108144304 108144308 TEAD2 TRANSFAC yes 104141585
chr6 108144306 108144309 MYB TRANSFAC yes 70412983
chr6 108144306 108144309 MYB TRANSFAC yes 104141586
chr6 108144306 108144318 FOXI1 JASPAR yes 70412984
chr6 108144306 108144318 FOXI1 JASPAR yes 104141587
chr6 108144323 108144332 NKX2-8 JASPAR yes 70412985
chr6 108144371 108144377 TBP TRANSFAC yes 70412986
chr6 108144380 108144395 STAT1 JASPAR yes 70412987
chr6 108144382 108144393 STAT1 JASPAR yes 70412988
chr6 108144382 108144393 STAT3 JASPAR yes 70412989
chr6 108144399 108144411 HLF JASPAR yes 70412990
chr6 108144406 108144409 MYB TRANSFAC yes 70412991
chr6 108144473 108144479 GATA3 JASPAR yes 70412992
chr6 108144477 108144487 NFATC3 JASPAR yes 70412993
chr6 108144483 108144498 HNF4A JASPAR yes 70412994
chr6 108144484 108144498 RXRB JASPAR yes 70412995
chr6 108144484 108144499 HNF4G JASPAR yes 70412996
chr6 108144503 108144521 MAFF JASPAR yes 70412997
chr6 108144504 108144519 MAFK JASPAR yes 70412998
chr6 108144508 108144519 NRL JASPAR yes 70412999
chr6 108144530 108144545 HNF4A JASPAR yes 70413000
chr6 108144531 108144546 HNF4G JASPAR yes 70413001
SNP sites on vista53027[chr6:108144215-108144549]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 108144218 rs11423518 T TA
FOXP1 IRF1 TBP
9243982
chr6 108144218 rs397720707 T TA
FOXP1 IRF1 TBP
9243983
chr6 108144377 rs80256497 A C
TBP
9243984
chr6 108144409 rs113414118 A G
HLF MYB
9243985
chr6 108144416 rs9400150 T A,C no 9243986
Genes possibly regulated by vista53027[chr6:108144215-108144549]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 108025308 108145521 - SCML4 ENSG00000146285.9 108145521 0.96 0.93 6846 99028
Expression level of Genes
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miRNAs possibly regulated by vista53027[chr6:108144215-108144549]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results