EnhancerDB
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  3. vista53028[chr6:108169525-108169909]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53028[chr6:108169525-108169909]
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Tissue distribution of vista53028
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Transcription factor that possibly regulate vista53028[chr6:108169525-108169909]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 108169463 108170008 CTCF UCSC Txn Factor no Conserved 108541196
chr6 108169465 108170101 POLR2A UCSC Txn Factor no Conserved 108541197
chr6 108169470 108169747 RAD21 UCSC Txn Factor no Conserved 108541198
chr6 108169485 108169761 SMC3 UCSC Txn Factor no Conserved 108541199
chr6 108169505 108169919 ZNF263 UCSC Txn Factor no Conserved 108541200
chr6 108169506 108169974 ELF1 UCSC Txn Factor no Conserved 108541201
chr6 108169548 108169946 MAX UCSC Txn Factor no Conserved 108541202
chr6 108169576 108169904 GABPA UCSC Txn Factor no Conserved 108541203
chr6 108169587 108169606 PAX5 JASPAR yes 70413002
chr6 108169588 108169602 PLAG1 JASPAR yes 70413003
chr6 108169600 108169611 E2F4 JASPAR yes 70413004
chr6 108169601 108169612 E2F1 JASPAR yes 70413005
chr6 108169603 108169622 CTCF JASPAR yes 70413006
chr6 108169609 108169623 PLAG1 JASPAR yes 70413007
chr6 108169634 108169639 SP1 TRANSFAC yes 70413008
chr6 108169643 108169647 YY1 TRANSFAC yes 70413009
chr6 108169691 108169701 ELK1 JASPAR yes 70413010
chr6 108169692 108169703 ETV2 JASPAR yes 70413011
chr6 108169693 108169703 ELK1 JASPAR yes 70413012
chr6 108169693 108169703 ELK3 JASPAR yes 70413013
chr6 108169693 108169703 ERF JASPAR yes 70413014
chr6 108169693 108169703 ERG JASPAR yes 70413015
chr6 108169693 108169703 ETS1 JASPAR yes 70413016
chr6 108169693 108169703 ETV1 JASPAR yes 70413017
chr6 108169693 108169703 ETV3 JASPAR yes 70413018
chr6 108169693 108169703 ETV4 JASPAR yes 70413019
chr6 108169693 108169703 ETV5 JASPAR yes 70413020
chr6 108169693 108169703 FEV JASPAR yes 70413021
chr6 108169693 108169703 FLI1 JASPAR yes 70413022
chr6 108169693 108169704 ELK4 JASPAR yes 70413023
chr6 108169693 108169704 FLI1 JASPAR yes 70413024
chr6 108169695 108169701 ETS1 JASPAR yes 70413025
chr6 108169695 108169701 SPI1 JASPAR yes 70413026
chr6 108169697 108169710 ELF1 JASPAR yes 70413027
chr6 108169700 108169706 PEA3 TRANSFAC yes 70413028
chr6 108169700 108169710 SP1 JASPAR yes 70413029
chr6 108169700 108169711 FLI1 JASPAR yes 70413030
chr6 108169701 108169709 EHF JASPAR yes 70413031
chr6 108169746 108169759 ELF1 JASPAR yes 70413032
chr6 108169746 108169763 RXRA JASPAR yes 70413033
chr6 108169747 108169751 LFA1 TRANSFAC yes 70413034
chr6 108169749 108169760 FLI1 JASPAR yes 70413035
chr6 108169763 108169781 ESR1 JASPAR yes 70413036
chr6 108169783 108169793 MAX JASPAR yes 70413037
chr6 108169784 108169794 CLOCK JASPAR yes 70413038
chr6 108169784 108169794 MAX JASPAR yes 70413039
chr6 108169784 108169794 MLX JASPAR yes 70413040
chr6 108169784 108169794 MNT JASPAR yes 70413041
chr6 108169785 108169792 USF1 JASPAR yes 70413042
chr6 108169786 108169791 MYC TRANSFAC yes 70413043
chr6 108169786 108169791 USF1 TRANSFAC yes 70413044
chr6 108169786 108169791 USF2 TRANSFAC yes 70413045
chr6 108169814 108169827 ZBTB18 JASPAR yes 70413046
chr6 108169815 108169827 NHLH1 JASPAR yes 70413047
chr6 108169816 108169826 NHLH1 JASPAR yes 70413048
chr6 108169827 108169843 ZNF143 JASPAR yes 70413049
chr6 108169857 108169871 E2F7 JASPAR yes 70413050
chr6 108169879 108169891 CREB1 JASPAR yes 70413051
chr6 108169884 108169889 ATF1 TRANSFAC yes 70413052
chr6 108169887 108169901 EBF1 JASPAR yes 70413053
chr6 108169888 108169899 EBF1 JASPAR yes 70413054
chr6 108169888 108169902 EBF1 JASPAR yes 70413055
chr6 108169889 108169895 MZF1 JASPAR yes 70413056
chr6 108169890 108169901 EBF1 JASPAR yes 70413057
chr6 108169895 108169908 NFKB1 JASPAR yes 70413058
chr6 108169895 108169908 NFKB2 JASPAR yes 70413059
chr6 108169896 108169906 RELA JASPAR yes 70413060
chr6 108169896 108169907 NFKB1 JASPAR yes 70413061
chr6 108169896 108169909 NFKB1 JASPAR yes 70413062
chr6 108169897 108169907 NFKB1 JASPAR yes 70413063
chr6 108169897 108169908 NFKB1 JASPAR yes 70413064
SNP sites on vista53028[chr6:108169525-108169909]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 108169551 rs565632232 G A
CTCF ELF1 MAX POLR2A RAD21 SMC3 ZNF263
9244001
chr6 108169588 rs551422497 G T
CTCF ELF1 GABPA MAX PAX5 PLAG1 POLR2A RAD21 SMC3 ZNF263
9244002
chr6 108169698 rs567360336 G A
CTCF ELF1 ELK1 ELK3 ELK4 ERF ERG ETS1 ETV1 ETV2 ETV3 ETV4 ETV5 FEV FLI1 GABPA MAX POLR2A RAD21 SMC3 SPI1 ZNF263
9244003
chr6 108169908 rs649309 C T
CTCF ELF1 MAX NFKB1 NFKB2 POLR2A ZNF263
9244004
Genes possibly regulated by vista53028[chr6:108169525-108169909]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 108025308 108145521 - SCML4 ENSG00000146285.9 108145521 0.96 0.93 6846 75996
Expression level of Genes
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miRNAs possibly regulated by vista53028[chr6:108169525-108169909]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results