EnhancerDB
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  3. vista53030[chr6:108324190-108324471]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53030[chr6:108324190-108324471]
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Tissue distribution of vista53030
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Transcription factor that possibly regulate vista53030[chr6:108324190-108324471]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 108324106 108324346 USF1 UCSC Txn Factor no Conserved 108541204
chr6 108324201 108324219 NFYA JASPAR yes 70413080
chr6 108324201 108324219 NFYA JASPAR yes 104146642
chr6 108324204 108324220 NFYA JASPAR yes 70413081
chr6 108324204 108324220 NFYA JASPAR yes 104146643
chr6 108324207 108324222 NFYB JASPAR yes 70413082
chr6 108324207 108324222 NFYB JASPAR yes 104146644
chr6 108324235 108324253 MAFF JASPAR yes 70413083
chr6 108324235 108324253 MAFF JASPAR yes 104146645
chr6 108324239 108324243 ESR1 TRANSFAC yes 70413084
chr6 108324239 108324243 ESR1 TRANSFAC yes 104146646
chr6 108324240 108324250 MSC JASPAR yes 70413085
chr6 108324240 108324250 TFAP4 JASPAR yes 70413086
chr6 108324240 108324250 MSC JASPAR yes 104146647
chr6 108324240 108324250 TFAP4 JASPAR yes 104146648
chr6 108324248 108324256 FOXO3 JASPAR yes 70413087
chr6 108324248 108324256 FOXO3 JASPAR yes 104146649
chr6 108324249 108324263 BATF3 JASPAR yes 70413088
chr6 108324249 108324263 BATF3 JASPAR yes 104146650
chr6 108324250 108324265 JUND JASPAR yes 70413089
chr6 108324250 108324265 JUND JASPAR yes 104146651
chr6 108324251 108324264 JUN JASPAR yes 70413090
chr6 108324251 108324264 JUN JASPAR yes 104146652
chr6 108324252 108324259 JUN TRANSFAC yes 70413091
chr6 108324252 108324259 JUN TRANSFAC yes 104146653
chr6 108324267 108324278 USF2 JASPAR yes 70413092
chr6 108324267 108324278 USF2 JASPAR yes 104146654
chr6 108324291 108324295 NFE TRANSFAC yes 70413093
chr6 108324291 108324295 NFE TRANSFAC yes 104146655
chr6 108324308 108324312 NFE TRANSFAC yes 70413094
chr6 108324308 108324312 NFE TRANSFAC yes 104146656
chr6 108324315 108324321 NFIC JASPAR yes 70413095
chr6 108324315 108324321 NFIC JASPAR yes 104146657
chr6 108324322 108324326 NFE TRANSFAC yes 70413096
chr6 108324322 108324326 NFE TRANSFAC yes 104146658
chr6 108324341 108324356 TFAP2A JASPAR yes 70413097
chr6 108324341 108324356 TFAP2C JASPAR yes 70413098
chr6 108324341 108324356 TFAP2A JASPAR yes 104146659
chr6 108324341 108324356 TFAP2C JASPAR yes 104146660
chr6 108324343 108324358 TFAP2A JASPAR yes 70413099
chr6 108324343 108324358 TFAP2C JASPAR yes 70413100
chr6 108324343 108324358 TFAP2A JASPAR yes 104146661
chr6 108324343 108324358 TFAP2C JASPAR yes 104146662
chr6 108324344 108324355 TFAP2A JASPAR yes 70413101
chr6 108324344 108324355 TFAP2B JASPAR yes 70413102
chr6 108324344 108324355 TFAP2C JASPAR yes 70413103
chr6 108324344 108324355 TFAP2A JASPAR yes 104146663
chr6 108324344 108324355 TFAP2B JASPAR yes 104146664
chr6 108324344 108324355 TFAP2C JASPAR yes 104146665
chr6 108324344 108324356 TFAP2A JASPAR yes 70413104
chr6 108324344 108324356 TFAP2B JASPAR yes 70413105
chr6 108324344 108324356 TFAP2C JASPAR yes 70413106
chr6 108324344 108324356 TFAP2A JASPAR yes 104146666
chr6 108324344 108324356 TFAP2B JASPAR yes 104146667
chr6 108324344 108324356 TFAP2C JASPAR yes 104146668
chr6 108324345 108324354 TFAP2A JASPAR yes 70413107
chr6 108324345 108324354 TFAP2A JASPAR yes 104146669
chr6 108324388 108324399 FOXH1 JASPAR yes 70413108
chr6 108324388 108324399 FOXH1 JASPAR yes 104146670
chr6 108324392 108324398 ZNF354C JASPAR yes 70413109
chr6 108324392 108324398 ZNF354C JASPAR yes 104146671
chr6 108324409 108324430 IRF1 JASPAR yes 70413110
chr6 108324409 108324430 IRF1 JASPAR yes 104146672
chr6 108324413 108324428 PRDM1 JASPAR yes 70413111
chr6 108324413 108324428 STAT2 JASPAR yes 70413112
chr6 108324413 108324428 PRDM1 JASPAR yes 104146673
chr6 108324413 108324428 STAT2 JASPAR yes 104146674
chr6 108324413 108324431 IRF2 JASPAR yes 70413113
chr6 108324413 108324431 IRF2 JASPAR yes 104146675
chr6 108324414 108324435 IRF1 JASPAR yes 70413114
chr6 108324414 108324435 IRF1 JASPAR yes 104146676
chr6 108324416 108324427 FLI1 JASPAR yes 70413115
chr6 108324416 108324427 FLI1 JASPAR yes 104146677
chr6 108324417 108324422 ETS2 TRANSFAC yes 70413116
chr6 108324417 108324422 ETS2 TRANSFAC yes 104146678
chr6 108324418 108324433 STAT2 JASPAR yes 70413117
chr6 108324418 108324433 STAT2 JASPAR yes 104146679
chr6 108324419 108324432 ELF1 JASPAR yes 70413118
chr6 108324419 108324432 ELF1 JASPAR yes 104146680
chr6 108324420 108324430 ELK1 JASPAR yes 70413119
chr6 108324420 108324430 ELK1 JASPAR yes 104146681
chr6 108324421 108324432 ELF5 JASPAR yes 70413120
chr6 108324421 108324432 ETV2 JASPAR yes 70413121
chr6 108324421 108324432 ELF5 JASPAR yes 104146682
chr6 108324421 108324432 ETV2 JASPAR yes 104146683
chr6 108324422 108324432 ERG JASPAR yes 70413122
chr6 108324422 108324432 ETV5 JASPAR yes 70413123
chr6 108324422 108324432 FEV JASPAR yes 70413124
chr6 108324422 108324432 FLI1 JASPAR yes 70413125
chr6 108324422 108324432 GABPA JASPAR yes 70413126
chr6 108324422 108324432 ERG JASPAR yes 104146684
chr6 108324422 108324432 ETV5 JASPAR yes 104146685
chr6 108324422 108324432 FEV JASPAR yes 104146686
chr6 108324422 108324432 FLI1 JASPAR yes 104146687
chr6 108324422 108324432 GABPA JASPAR yes 104146688
chr6 108324422 108324433 FLI1 JASPAR yes 70413127
chr6 108324422 108324433 FLI1 JASPAR yes 104146689
chr6 108324424 108324430 ETS1 JASPAR yes 70413128
chr6 108324424 108324430 SPI1 JASPAR yes 70413129
chr6 108324424 108324430 ETS1 JASPAR yes 104146690
chr6 108324424 108324430 SPI1 JASPAR yes 104146691
chr6 108324433 108324442 NKX3-2 JASPAR yes 70413130
chr6 108324433 108324442 NKX3-2 JASPAR yes 104146692
chr6 108324434 108324442 ISL2 JASPAR yes 70413131
chr6 108324434 108324442 ISL2 JASPAR yes 104146693
chr6 108324441 108324457 SOX8 JASPAR yes 70413132
chr6 108324441 108324457 SOX8 JASPAR yes 104146694
chr6 108324454 108324460 TCF4 TRANSFAC yes 70413133
chr6 108324454 108324460 TCF4 TRANSFAC yes 104146695
chr6 108324462 108324469 JUN TRANSFAC yes 70413134
chr6 108324462 108324469 JUN TRANSFAC yes 104146696
chr6 108324467 108324488 ZNF263 JASPAR yes 70413135
chr6 108324467 108324488 ZNF263 JASPAR yes 104146697
chr6 108324470 108324491 ZNF263 JASPAR yes 70413136
chr6 108324470 108324491 ZNF263 JASPAR yes 104146698
chr6 108324471 108324492 ZNF263 JASPAR yes 70413137
chr6 108324471 108324492 ZNF263 JASPAR yes 104146699
SNP sites on vista53030[chr6:108324190-108324471]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 108324194 rs113440795 T G
USF1
9244607
chr6 108324259 rs138291650 C T
BATF3 JUN JUND USF1
9244608
chr6 108324274 rs115607757 A G
USF1 USF2
9244609
chr6 108324362 rs60099315 A C,G no 9244610
chr6 108324374 rs62427420 C G no 9244611
chr6 108324424 rs142171808 A ACAGAAG,ACGGAAG
ELF1 ELF5 ELK1 ERG ETS1 ETV2 ETV5 FEV FLI1 GABPA IRF1 IRF2 PRDM1 SPI1 STAT2
9244612
chr6 108324426 rs189835276 G C
ELF1 ELF5 ELK1 ERG ETS1 ETV2 ETV5 FEV FLI1 GABPA IRF1 IRF2 PRDM1 SPI1 STAT2
9244613
Genes possibly regulated by vista53030[chr6:108324190-108324471]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 108188960 108279393 - SEC63 ENSG00000025796.9 108279393 0.59 0.99 6847 55203
Expression level of Genes
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miRNAs possibly regulated by vista53030[chr6:108324190-108324471]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results