EnhancerDB
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  3. vista53035[chr6:108490902-108491184]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53035[chr6:108490902-108491184]
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Tissue distribution of vista53035
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Transcription factor that possibly regulate vista53035[chr6:108490902-108491184]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 108490919 108490930 ESRRA JASPAR yes 70413324
chr6 108490921 108490938 RARA JASPAR yes 70413325
chr6 108490933 108490954 ZNF263 JASPAR yes 70413326
chr6 108490944 108490950 SP1 TRANSFAC yes 70413327
chr6 108490944 108490954 SP1 JASPAR yes 70413328
chr6 108490945 108490956 E2F6 JASPAR yes 70413329
chr6 108490965 108490975 MZF1 JASPAR yes 70413330
chr6 108490968 108490974 SP1 TRANSFAC yes 70413331
chr6 108490969 108490980 E2F4 JASPAR yes 70413332
chr6 108490969 108490980 E2F6 JASPAR yes 70413333
chr6 108490970 108490981 E2F1 JASPAR yes 70413334
chr6 108490974 108490979 SP1 TRANSFAC yes 70413335
chr6 108490981 108490991 SP1 JASPAR yes 70413336
chr6 108490981 108490991 ZNF740 JASPAR yes 70413337
chr6 108490983 108490989 MAZ TRANSFAC yes 70413338
chr6 108490983 108490993 SP1 JASPAR yes 70413339
chr6 108491028 108491037 THAP1 JASPAR yes 70413340
chr6 108491036 108491042 SOX10 JASPAR yes 70413341
chr6 108491076 108491080 ESR1 TRANSFAC yes 70413342
chr6 108491095 108491104 SNAI2 JASPAR yes 70413343
chr6 108491095 108491105 ID4 JASPAR yes 70413344
chr6 108491095 108491105 NHLH1 JASPAR yes 70413345
chr6 108491095 108491105 TCF3 JASPAR yes 70413346
chr6 108491095 108491105 TCF4 JASPAR yes 70413347
chr6 108491105 108491114 TFAP2A JASPAR yes 70413348
chr6 108491115 108491125 EVX1 JASPAR yes 70413349
chr6 108491115 108491125 EVX2 JASPAR yes 70413350
chr6 108491115 108491125 HOXA2 JASPAR yes 70413351
chr6 108491115 108491125 HOXB2 JASPAR yes 70413352
chr6 108491115 108491125 MEOX1 JASPAR yes 70413353
chr6 108491115 108491125 MEOX2 JASPAR yes 70413354
chr6 108491149 108491164 NR2C2 JASPAR yes 70413355
chr6 108491149 108491169 RREB1 JASPAR yes 70413356
chr6 108491152 108491162 SP1 JASPAR yes 70413357
chr6 108491157 108491169 INSM1 JASPAR yes 70413358
chr6 108491170 108491174 H4TF2 TRANSFAC yes 70413359
SNP sites on vista53035[chr6:108490902-108491184]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 108490944 rs559952333 G A
SP1 ZNF263
9245361
chr6 108490952 rs532506987 C A,T
E2F6 SP1 ZNF263
9245362
chr6 108490996 rs114600586 C G,T no 9245363
chr6 108491124 rs112720065 C T
EVX1 EVX2 HOXA2 HOXB2 MEOX1 MEOX2
9245364
Genes possibly regulated by vista53035[chr6:108490902-108491184]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 108362613 108487058 - OSTM1 ENSG00000081087.10 108487058 0.53 0.97 6848 96156
chr6 108487262 108510013 + NR2E1 ENSG00000112333.7 108487262 0.98 1.0 6849 96360
chr6 108532426 108582464 - SNX3 ENSG00000112335.10 108582464 0.54 0.99 6850 8720
Expression level of Genes
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miRNAs possibly regulated by vista53035[chr6:108490902-108491184]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results