EnhancerDB
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  3. vista53046[chr6:108972074-108972278]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53046[chr6:108972074-108972278]
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Tissue distribution of vista53046
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Transcription factor that possibly regulate vista53046[chr6:108972074-108972278]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 108972091 108972265 CEBPB UCSC Txn Factor no Conserved 108541231
chr6 108972091 108972407 EBF1 UCSC Txn Factor no Conserved 108541232
chr6 108972074 108972084 ALX3 JASPAR yes 70414040
chr6 108972074 108972084 EMX1 JASPAR yes 70414041
chr6 108972074 108972084 EMX2 JASPAR yes 70414042
chr6 108972074 108972084 EVX1 JASPAR yes 70414043
chr6 108972074 108972084 EVX2 JASPAR yes 70414044
chr6 108972074 108972084 GSX1 JASPAR yes 70414045
chr6 108972074 108972084 GSX2 JASPAR yes 70414046
chr6 108972074 108972084 HOXA2 JASPAR yes 70414047
chr6 108972074 108972084 HOXB2 JASPAR yes 70414048
chr6 108972074 108972084 HOXB3 JASPAR yes 70414049
chr6 108972074 108972084 LHX2 JASPAR yes 70414050
chr6 108972074 108972084 MEOX1 JASPAR yes 70414051
chr6 108972074 108972084 MEOX2 JASPAR yes 70414052
chr6 108972074 108972084 MIXL1 JASPAR yes 70414053
chr6 108972074 108972084 NOTO JASPAR yes 70414054
chr6 108972074 108972084 ALX3 JASPAR yes 104189326
chr6 108972074 108972084 EMX1 JASPAR yes 104189327
chr6 108972074 108972084 EMX2 JASPAR yes 104189328
chr6 108972074 108972084 EVX1 JASPAR yes 104189329
chr6 108972074 108972084 EVX2 JASPAR yes 104189330
chr6 108972074 108972084 GSX1 JASPAR yes 104189331
chr6 108972074 108972084 GSX2 JASPAR yes 104189332
chr6 108972074 108972084 HOXA2 JASPAR yes 104189333
chr6 108972074 108972084 HOXB2 JASPAR yes 104189334
chr6 108972074 108972084 HOXB3 JASPAR yes 104189335
chr6 108972074 108972084 LHX2 JASPAR yes 104189336
chr6 108972074 108972084 MEOX1 JASPAR yes 104189337
chr6 108972074 108972084 MEOX2 JASPAR yes 104189338
chr6 108972074 108972084 MIXL1 JASPAR yes 104189339
chr6 108972074 108972084 NOTO JASPAR yes 104189340
chr6 108972075 108972083 DLX6 JASPAR yes 70414055
chr6 108972075 108972083 EN1 JASPAR yes 70414056
chr6 108972075 108972083 LBX1 JASPAR yes 70414057
chr6 108972075 108972083 PAX4 JASPAR yes 70414058
chr6 108972075 108972083 PDX1 JASPAR yes 70414059
chr6 108972075 108972083 VAX1 JASPAR yes 70414060
chr6 108972075 108972083 VAX2 JASPAR yes 70414061
chr6 108972075 108972083 VSX1 JASPAR yes 70414062
chr6 108972075 108972083 VSX2 JASPAR yes 70414063
chr6 108972075 108972083 DLX6 JASPAR yes 104189341
chr6 108972075 108972083 EN1 JASPAR yes 104189342
chr6 108972075 108972083 LBX1 JASPAR yes 104189343
chr6 108972075 108972083 PAX4 JASPAR yes 104189344
chr6 108972075 108972083 PDX1 JASPAR yes 104189345
chr6 108972075 108972083 VAX1 JASPAR yes 104189346
chr6 108972075 108972083 VAX2 JASPAR yes 104189347
chr6 108972075 108972083 VSX1 JASPAR yes 104189348
chr6 108972075 108972083 VSX2 JASPAR yes 104189349
chr6 108972075 108972085 POU6F2 JASPAR yes 70414064
chr6 108972075 108972085 POU6F2 JASPAR yes 104189350
chr6 108972101 108972116 HNF1A JASPAR yes 70414065
chr6 108972101 108972116 HNF1A JASPAR yes 104189351
chr6 108972113 108972131 MAFF JASPAR yes 70414066
chr6 108972113 108972131 MAFF JASPAR yes 104189352
chr6 108972114 108972129 MAFK JASPAR yes 70414067
chr6 108972114 108972129 MAFK JASPAR yes 104189353
chr6 108972117 108972121 ESR1 TRANSFAC yes 70414068
chr6 108972117 108972121 ESR1 TRANSFAC yes 104189354
chr6 108972118 108972129 NRL JASPAR yes 70414069
chr6 108972118 108972129 NRL JASPAR yes 104189355
chr6 108972123 108972127 YY1 TRANSFAC yes 70414070
chr6 108972123 108972127 YY1 TRANSFAC yes 104189356
chr6 108972123 108972134 CEBPB JASPAR yes 70414071
chr6 108972123 108972134 CEBPB JASPAR yes 104189357
chr6 108972124 108972135 CEBPA JASPAR yes 70414072
chr6 108972124 108972135 CEBPA JASPAR yes 104189358
chr6 108972136 108972140 YY1 TRANSFAC yes 70414073
chr6 108972136 108972140 YY1 TRANSFAC yes 104189359
chr6 108972145 108972149 ESR1 TRANSFAC yes 70414074
chr6 108972145 108972149 ESR1 TRANSFAC yes 104189360
chr6 108972162 108972177 RUNX2 JASPAR yes 70414075
chr6 108972162 108972177 RUNX2 JASPAR yes 104189361
chr6 108972165 108972176 RUNX1 JASPAR yes 70414076
chr6 108972165 108972176 RUNX1 JASPAR yes 104189362
chr6 108972166 108972176 RUNX3 JASPAR yes 70414077
chr6 108972166 108972176 RUNX3 JASPAR yes 104189363
chr6 108972167 108972176 RUNX2 JASPAR yes 70414078
chr6 108972167 108972176 RUNX2 JASPAR yes 104189364
chr6 108972178 108972193 FOXP1 JASPAR yes 70414079
chr6 108972178 108972193 FOXP1 JASPAR yes 104189365
chr6 108972194 108972205 CEBPA JASPAR yes 70414080
chr6 108972194 108972205 CEBPA JASPAR yes 104189366
chr6 108972207 108972218 CEBPA JASPAR yes 70414081
chr6 108972207 108972218 CEBPA JASPAR yes 104189367
chr6 108972208 108972219 CEBPB JASPAR yes 70414082
chr6 108972208 108972219 CEBPB JASPAR yes 104189368
chr6 108972222 108972234 POU2F1 JASPAR yes 70414083
chr6 108972222 108972234 POU2F1 JASPAR yes 104189369
chr6 108972222 108972235 POU3F3 JASPAR yes 70414084
chr6 108972222 108972235 POU3F3 JASPAR yes 104189370
chr6 108972222 108972236 POU1F1 JASPAR yes 70414085
chr6 108972222 108972236 POU1F1 JASPAR yes 104189371
chr6 108972223 108972235 POU3F1 JASPAR yes 70414086
chr6 108972223 108972235 POU3F2 JASPAR yes 70414087
chr6 108972223 108972235 POU3F1 JASPAR yes 104189372
chr6 108972223 108972235 POU3F2 JASPAR yes 104189373
chr6 108972223 108972236 POU2F2 JASPAR yes 70414088
chr6 108972223 108972236 POU2F2 JASPAR yes 104189374
chr6 108972224 108972233 POU3F4 JASPAR yes 70414089
chr6 108972224 108972233 POU5F1B JASPAR yes 70414090
chr6 108972224 108972233 POU3F4 JASPAR yes 104189375
chr6 108972224 108972233 POU5F1B JASPAR yes 104189376
chr6 108972254 108972268 EBF1 JASPAR yes 70414091
chr6 108972254 108972268 EBF1 JASPAR yes 104189377
chr6 108972270 108972280 GSX1 JASPAR yes 70414092
chr6 108972270 108972280 GSX1 JASPAR yes 104189378
chr6 108972273 108972277 YY1 TRANSFAC yes 70414093
chr6 108972273 108972277 YY1 TRANSFAC yes 104189379
SNP sites on vista53046[chr6:108972074-108972278]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 108972109 rs149939258 A G
CEBPB EBF1 HNF1A
9247982
chr6 108972228 rs192020910 G A
CEBPB EBF1 POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B
9247983
chr6 108972272 rs78691722 C T
EBF1 GSX1
9247984
Genes possibly regulated by vista53046[chr6:108972074-108972278]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 108881038 109005977 + FOXO3 ENSG00000118689.10 108881038 0.76 1.0 6852 8964
Expression level of Genes
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miRNAs possibly regulated by vista53046[chr6:108972074-108972278]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results