EnhancerDB
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  3. vista53048[chr6:109035823-109035995]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53048[chr6:109035823-109035995]
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Tissue distribution of vista53048
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Transcription factor that possibly regulate vista53048[chr6:109035823-109035995]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 109035832 109035837 MYB TRANSFAC yes 70414172
chr6 109035832 109035837 MYB TRANSFAC yes 104197179
chr6 109035858 109035864 GATA3 JASPAR yes 70414173
chr6 109035858 109035864 GATA3 JASPAR yes 104197180
chr6 109035868 109035871 MYB TRANSFAC yes 70414174
chr6 109035868 109035871 MYB TRANSFAC yes 104197181
chr6 109035874 109035880 PEA3 TRANSFAC yes 70414175
chr6 109035874 109035880 PEA3 TRANSFAC yes 104197182
chr6 109035875 109035883 EHF JASPAR yes 70414176
chr6 109035875 109035883 EHF JASPAR yes 104197183
chr6 109035876 109035883 SPI1 JASPAR yes 70414177
chr6 109035876 109035883 SPI1 JASPAR yes 104197184
chr6 109035927 109035943 POU4F2 JASPAR yes 70414178
chr6 109035927 109035943 POU4F2 JASPAR yes 104197185
chr6 109035930 109035934 YY1 TRANSFAC yes 70414179
chr6 109035930 109035934 YY1 TRANSFAC yes 104197186
chr6 109035933 109035947 ONECUT1 JASPAR yes 70414180
chr6 109035933 109035947 ONECUT2 JASPAR yes 70414181
chr6 109035933 109035947 ONECUT3 JASPAR yes 70414182
chr6 109035933 109035947 ONECUT1 JASPAR yes 104197187
chr6 109035933 109035947 ONECUT2 JASPAR yes 104197188
chr6 109035933 109035947 ONECUT3 JASPAR yes 104197189
chr6 109035933 109035948 HNF1A JASPAR yes 70414183
chr6 109035933 109035948 HNF1A JASPAR yes 104197190
chr6 109035934 109035947 HNF1B JASPAR yes 70414184
chr6 109035934 109035947 HNF1B JASPAR yes 104197191
chr6 109035936 109035946 CUX1 JASPAR yes 70414185
chr6 109035936 109035946 CUX2 JASPAR yes 70414186
chr6 109035936 109035946 PAX3 JASPAR yes 70414187
chr6 109035936 109035946 PAX7 JASPAR yes 70414188
chr6 109035936 109035946 CUX1 JASPAR yes 104197192
chr6 109035936 109035946 CUX2 JASPAR yes 104197193
chr6 109035936 109035946 PAX3 JASPAR yes 104197194
chr6 109035936 109035946 PAX7 JASPAR yes 104197195
chr6 109035943 109035946 MYB TRANSFAC yes 70414189
chr6 109035943 109035946 MYB TRANSFAC yes 104197196
chr6 109035952 109035956 LFA1 TRANSFAC yes 70414190
chr6 109035952 109035956 LFA1 TRANSFAC yes 104197197
chr6 109035958 109035969 NFE2L2 JASPAR yes 70414191
chr6 109035958 109035969 NFE2L2 JASPAR yes 104197198
chr6 109035970 109035990 RREB1 JASPAR yes 70414192
chr6 109035970 109035990 RREB1 JASPAR yes 104197199
chr6 109035971 109035991 RREB1 JASPAR yes 70414193
chr6 109035971 109035991 RREB1 JASPAR yes 104197200
chr6 109035972 109035992 RREB1 JASPAR yes 70414194
chr6 109035972 109035992 RREB1 JASPAR yes 104197201
chr6 109035973 109035983 SP1 JASPAR yes 70414195
chr6 109035973 109035983 SP1 JASPAR yes 104197202
chr6 109035973 109035993 RREB1 JASPAR yes 70414196
chr6 109035973 109035993 RREB1 JASPAR yes 104197203
chr6 109035973 109035994 ZNF263 JASPAR yes 70414197
chr6 109035973 109035994 ZNF263 JASPAR yes 104197204
chr6 109035974 109035994 RREB1 JASPAR yes 70414198
chr6 109035974 109035994 RREB1 JASPAR yes 104197205
chr6 109035975 109035995 RREB1 JASPAR yes 70414199
chr6 109035975 109035995 RREB1 JASPAR yes 104197206
chr6 109035976 109035981 SP1 TRANSFAC yes 70414200
chr6 109035976 109035981 SP1 TRANSFAC yes 104197207
chr6 109035977 109035987 ZNF740 JASPAR yes 70414201
chr6 109035977 109035987 ZNF740 JASPAR yes 104197208
chr6 109035977 109035997 RREB1 JASPAR yes 70414202
chr6 109035977 109035997 RREB1 JASPAR yes 104197209
chr6 109035982 109035996 GLIS2 JASPAR yes 70414203
chr6 109035982 109035996 GLIS3 JASPAR yes 70414204
chr6 109035982 109035996 GLIS2 JASPAR yes 104197210
chr6 109035982 109035996 GLIS3 JASPAR yes 104197211
chr6 109035985 109035990 SP1 TRANSFAC yes 70414205
chr6 109035985 109035990 SP1 TRANSFAC yes 104197212
chr6 109035985 109035995 ZNF740 JASPAR yes 70414206
chr6 109035985 109035995 ZNF740 JASPAR yes 104197213
chr6 109035986 109035996 ZNF740 JASPAR yes 70414207
chr6 109035986 109035996 ZNF740 JASPAR yes 104197214
chr6 109035991 109036001 GSC2 JASPAR yes 70414208
chr6 109035991 109036001 GSC JASPAR yes 70414209
chr6 109035991 109036001 GSC2 JASPAR yes 104197215
chr6 109035991 109036001 GSC JASPAR yes 104197216
chr6 109035992 109036000 RHOXF1 JASPAR yes 70414210
chr6 109035992 109036000 RHOXF1 JASPAR yes 104197217
chr6 109035992 109036001 PITX3 JASPAR yes 70414211
chr6 109035992 109036001 PITX3 JASPAR yes 104197218
SNP sites on vista53048[chr6:109035823-109035995]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 109035836 rs77969079 G A
MYB
9248741
chr6 109035907 rs77131205 C G,T no 9248742
chr6 109035913 rs73504212 T C no 9248743
chr6 109035971 rs144171328 GC G
RREB1
9248744
chr6 109035973 rs1268152 C A,G
RREB1 SP1 ZNF263
9248745
chr6 109035974 rs111693854 G A,C
RREB1 SP1 ZNF263
9248746
chr6 109035984 rs540029531 G A
GLIS2 GLIS3 RREB1 ZNF263 ZNF740
9248747
Genes possibly regulated by vista53048[chr6:109035823-109035995]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista53048[chr6:109035823-109035995]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results