EnhancerDB
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  3. vista53066[chr6:109381114-109381226]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista53066[chr6:109381114-109381226]
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Tissue distribution of vista53066
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Transcription factor that possibly regulate vista53066[chr6:109381114-109381226]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr6 109381104 109381125 IRF1 JASPAR yes 70414975
chr6 109381104 109381125 IRF1 JASPAR yes 104225541
chr6 109381106 109381115 SRY JASPAR yes 70414976
chr6 109381106 109381115 SRY JASPAR yes 104225543
chr6 109381108 109381123 PRDM1 JASPAR yes 70414977
chr6 109381108 109381123 PRDM1 JASPAR yes 104225545
chr6 109381108 109381126 IRF2 JASPAR yes 70414978
chr6 109381108 109381126 IRF2 JASPAR yes 104225546
chr6 109381109 109381124 SOX21 JASPAR yes 70414979
chr6 109381109 109381124 SOX21 JASPAR yes 104225547
chr6 109381113 109381119 TCF4 TRANSFAC yes 70414980
chr6 109381113 109381119 TCF4 TRANSFAC yes 104225548
chr6 109381113 109381127 IRF8 JASPAR yes 70414981
chr6 109381113 109381127 IRF8 JASPAR yes 104225549
chr6 109381136 109381145 SRY JASPAR yes 70414982
chr6 109381136 109381145 SRY JASPAR yes 104225550
chr6 109381144 109381159 FOXP1 JASPAR yes 70414983
chr6 109381144 109381159 FOXP1 JASPAR yes 104225551
chr6 109381145 109381152 JUN TRANSFAC yes 70414984
chr6 109381145 109381152 JUN TRANSFAC yes 104225552
chr6 109381151 109381157 HiNF-A TRANSFAC yes 70414985
chr6 109381151 109381157 HiNF-A TRANSFAC yes 104225553
chr6 109381157 109381168 NFKB1 JASPAR yes 70414986
chr6 109381157 109381168 NFKB1 JASPAR yes 104225554
chr6 109381157 109381170 NFKB1 JASPAR yes 70414987
chr6 109381157 109381170 NFKB2 JASPAR yes 70414988
chr6 109381157 109381170 NFKB1 JASPAR yes 104225555
chr6 109381157 109381170 NFKB2 JASPAR yes 104225556
chr6 109381158 109381168 NFKB1 JASPAR yes 70414989
chr6 109381158 109381168 RELA JASPAR yes 70414990
chr6 109381158 109381168 NFKB1 JASPAR yes 104225557
chr6 109381158 109381168 RELA JASPAR yes 104225558
chr6 109381158 109381169 NFKB1 JASPAR yes 70414991
chr6 109381158 109381169 NFKB1 JASPAR yes 104225559
chr6 109381160 109381174 SPI1 JASPAR yes 70414992
chr6 109381160 109381174 SPIC JASPAR yes 70414993
chr6 109381160 109381174 SPI1 JASPAR yes 104225560
chr6 109381160 109381174 SPIC JASPAR yes 104225561
chr6 109381168 109381174 TCF4 TRANSFAC yes 70414994
chr6 109381168 109381174 TCF4 TRANSFAC yes 104225562
chr6 109381184 109381199 LEF1 JASPAR yes 70414995
chr6 109381184 109381199 LEF1 JASPAR yes 104225563
chr6 109381190 109381204 RORA JASPAR yes 70414996
chr6 109381190 109381204 RORA JASPAR yes 104225564
chr6 109381191 109381201 RORA JASPAR yes 70414997
chr6 109381191 109381201 RORA JASPAR yes 104225565
chr6 109381196 109381210 STAT1 JASPAR yes 70414998
chr6 109381196 109381210 STAT1 JASPAR yes 104225566
chr6 109381197 109381211 IRF7 JASPAR yes 70414999
chr6 109381197 109381211 IRF7 JASPAR yes 104225567
SNP sites on vista53066[chr6:109381114-109381226]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr6 109381140 rs79723641 A G
SRY
9251195
Genes possibly regulated by vista53066[chr6:109381114-109381226]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr6 109307640 109416022 - SESN1 ENSG00000080546.9 109416022 0.67 0.98 6854 65204
chr6 109416313 109485135 + CEP57L1 ENSG00000183137.10 109416313 0.77 0.98 6855 64913
Expression level of Genes
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miRNAs possibly regulated by vista53066[chr6:109381114-109381226]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results